BAC Information

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BAC

Clone NameB6Ng01-306M15
Chromosome10 (Build37)
Map Location 118,185,191 - 118,186,304
singlet/doubletsinglet
Overlap genenone
Upstream geneNup107, Rap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478
Downstream geneLOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1, Grip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306M15.bB6Ng01-306M15.g
ACCGA099730GA099731
length1,1131,188
definitionB6Ng01-306M15.b B6Ng01-306M15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgtgggactggctggcattgctctgcaataggaccaact
gcgtgagcatgtttactttttgaaggcttttattatttttttaaaatgct
ttccatattttccccaaaggtcagagtcttctacaagcacatagacaaag
ggtctaaattagagatgagactaaggctggagttcttggtgacagaagag
tgggtccagccttcctcaagactgtctccttctgagtgaaggtctattgt
ggctgtgaaatgaattttccctgttgtctgaccctgctgtctgatgccac
ccaagtgtgtctgctctgtcccatcccaccttgctaaggagccagggacc
acacccttgtgtgtgcgcgcacaaggtttcaggggatagtagagtctcag
attgcaaactggtatcctctgatgaaggctggggcagggacagccgctgc
tcacacacaagaaagatatatcattgactttgtttaagtccagagtatta
aaaaaaaaaaaagacaacaacctgcatctttagtacctttatattttctc
ccgtggcctctctccatccttgccccctctgtttcctccctacttgctgg
gaacctatgcttgaaccttctaggtcatatcctgcccaaacctctttaca
ctcgagagtgagcaagctgtctttcgttcccaacactcttatcttcatat
cttgttttaatctttgatgttatataaagtcaaataatatgctcagatac
cctctgcctaaggcctcatatttctgtgattaaatactgaccaaaagcaa
cttagggagttgcttagagtttctattgctgtgaagagaccctatgacca
tgggaattcttataaagggaaatcatttaactggggctggcttacaggtt
cagaggttcagtccattctcatggtgggaagcatggcagcatgtacggag
gcctggtgctggaaaagagcttagattctacatcttgatcttgagagcag
gaggagacttgtttttgcagcagcaggagtcctcactttgacagaagctt
ggagcataggcttcctcaaagcttgcctcccacagtgctacactctcagg
tagaaccacaccc
gaattcacaggtctgacccagtagaactaacccaccagaatggtagaatg
ggctcttaaagtctcagactcagctagattttaatatcttccagggctgg
agtaagaatctctagactatgtcctagacaagtagccaaggcacactgca
gtgtctctgatagccaggactcatacagagatcaaccatgatttccaact
actctcagaaactaaagagcaaaatagtgtttcctattcctatttacagt
ctgctagaccaaactctccatcccagagggagagacagttcctacaggag
gcacatcaacaatcccactgctctgggttatggctgttgccactttgacc
tcctcattgctctgaatcaacaggtcaagaaggcaattatgacatcactg
tggtatccaacctgactaggaccccacagtgaatttctgtctggaataca
ggcaacacctgatgggaccatctatgatcaccattcaccgtgagaccatt
ggaaaactgtgatctaatgcaagtaggcctacgagtgtcccagactctca
gaaatggagatttggtcatcctgaccaggtaacgaaccctatctagatca
ggcacttctaaaggcaaagggaatacagggtgcacagtatgagatcgctg
taaatgccagctaattaccatgtaacaagctacaaacaccagggctataa
ttgtcacgtgtatttcctcattttattctgaatatgtttctgtatataga
ttcagaacaaataatctttgttttcttttttctttttctcatcttccctc
gctgtgtggcttcttcagacactttgacctcatttaaattttggaatatt
gcttgtttagaatcagagtgtttatattcttgggtcctccgggaaagagt
caatgtgattctaagactccccccttttctttcctgggaaattggattag
ttgtagttttgggttagacgaagtaggtttatatgggtgtagacgacatt
gtggtcttgtattgtctttatgtgggggctgtgtatgtgtagtacataaa
catggggtgccacattgacatggaatgaattacaggtgtcatttctaatg
tcaccgaacggtgagggaatgccagcctgtcacagtacgtcatttccagg
atgtgttccgagtgacaagtggcgttcctatgaggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118185191_118186304
seq2: B6Ng01-306M15.b_50_1162

seq1  GAATTCTCAACTGTGGGACTGGCTGGCATTGCTCTGCAATAGGACCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGTGGGACTGGCTGGCATTGCTCTGCAATAGGACCAACT  50

seq1  GCGTGAGCATGTTTACTTTTTGAAGGCTTTTATTATTTTTTTAAAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGCATGTTTACTTTTTGAAGGCTTTTATTATTTTTTTAAAATGCT  100

seq1  TTCCATATTTTCCCCAAAGGTCAGAGTCTTCTACAAGCACATAGACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATTTTCCCCAAAGGTCAGAGTCTTCTACAAGCACATAGACAAAG  150

seq1  GGTCTAAATTAGAGATGAGACTAAGGCTGGAGTTCTTGGTGACAGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAATTAGAGATGAGACTAAGGCTGGAGTTCTTGGTGACAGAAGAG  200

seq1  TGGGTCCAGCCTTCCTCAAGACTGTCTCCTTCTGAGTGAAGGTCTATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCAGCCTTCCTCAAGACTGTCTCCTTCTGAGTGAAGGTCTATTGT  250

seq1  GGCTGTGAAATGAATTTTCCCTGTTGTCTGACCCTGCTGTCTGATGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAAATGAATTTTCCCTGTTGTCTGACCCTGCTGTCTGATGCCAC  300

seq1  CCAAGTGTGTCTGCTCTGTCCCATCCCACCTTGCTAAGGAGCCAGGGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTGTCTGCTCTGTCCCATCCCACCTTGCTAAGGAGCCAGGGACC  350

seq1  ACACCCTTGTGTGTGCGCGCACAAGGTTTCAGGGGATAGTAGAGTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTTGTGTGTGCGCGCACAAGGTTTCAGGGGATAGTAGAGTCTCAG  400

seq1  ATTGCAAACTGGTATCCTCTGATGAAGGCTGGGGCAGGGACAGCCGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAACTGGTATCCTCTGATGAAGGCTGGGGCAGGGACAGCCGCTGC  450

seq1  TCACACACAAGAAAGATATATCATTGACTTTGTTTAAGTCCAGAGTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACAAGAAAGATATATCATTGACTTTGTTTAAGTCCAGAGTATTA  500

seq1  AAAAAAAAAAAAGACAACAACCTGCATCTTTAGTACCTTTATATTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGACAACAACCTGCATCTTTAGTACCTTTATATTTTCTC  550

seq1  CCGTGGCCTCTCTCCATCCTTGCCCCCTCTGTTTCCTCCCTACTTGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCCTCTCTCCATCCTTGCCCCCTCTGTTTCCTCCCTACTTGCTGG  600

seq1  GAACCTATGCTTGAACCTTCTAGGTCATATCCTGCCCAAACCTCTTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTATGCTTGAACCTTCTAGGTCATATCCTGCCCAAACCTCTTTACA  650

seq1  CTCGAGAGTGAGCAAGCTGTCTTTCGTTCCCAACACTCTTATCTTCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGAGTGAGCAAGCTGTCTTTCGTTCCCAACACTCTTATCTTCATAT  700

seq1  CTTGTTTTAATCTTTGATGTTATATAAAGTCAAATAATATGCTCAGATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTAATCTTTGATGTTATATAAAGTCAAATAATATGCTCAGATAC  750

seq1  CCTCTGCCTAAGGCCTCATATTTCTGTGATTAAATACTGACCAAAAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTAAGGCCTCATATTTCTGTGATTAAATACTGACCAAAAGCAA  800

seq1  CTTAGGGAGTTGCTTAGAGTTTCTATTGCTGTGAAGAGACCCTATGACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGAGTTGCTTAGAGTTTCTATTGCTGTGAAGAGACCCTATGACCA  850

seq1  TGGGAATTCTTATAAA-GGAAATCATTTAACTGGGGCTGGCTTACAGGTT  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGGAATTCTTATAAAGGGAAATCATTTAACTGGGGCTGGCTTACAGGTT  900

seq1  CAGAGGTTCAGTCCATTCTCATGGTGGGAAGCATGGCAGCATGTACGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTTCAGTCCATTCTCATGGTGGGAAGCATGGCAGCATGTACGGAG  950

seq1  GCCTGGTGCTGGAAAAGGAGCTTAGAATTCTACATCTTGATCTGAAGGAG  999
      |||||||||||||||| |||||||| |||||||||||||||||    |||
seq2  GCCTGGTGCTGGAAAA-GAGCTTAG-ATTCTACATCTTGATCT---TGAG  995

seq1  GCCAGGAAGAGAC-TGTTTTTGCAGGCAGCCAGAGT-CTCACTTTGGACA  1047
        ||||| ||||| |||||||||| |||||  |||| |||||||| ||||
seq2  AGCAGGAGGAGACTTGTTTTTGCA-GCAGCAGGAGTCCTCACTTT-GACA  1043

seq1  G-AGCTT-GAGCATAGGCT--CTCAAAGCCTGCC-CCCACAGTGCTACAC  1092
      | ||||| |||||||||||  |||||||| |||| |||||||||||||||
seq2  GAAGCTTGGAGCATAGGCTTCCTCAAAGCTTGCCTCCCACAGTGCTACAC  1093

seq1  TTCCTCCAGTAAGACCACACCC  1114
      |  |||  |||  |||||||||
seq2  T--CTCAGGTAGAACCACACCC  1113