BAC Information

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BAC

Clone NameB6Ng01-307B05
Chromosome10 (Build37)
Map Location 128,669,542 - 128,770,433
singlet/doubletdoublet
Overlap geneOlfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781
Upstream geneTimeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925
Downstream geneOlfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307B05.bB6Ng01-307B05.g
ACCGA099942GA099943
length1,0551,105
definitionB6Ng01-307B05.b B6Ng01-307B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,769,360 - 128,770,433)(128,669,542 - 128,670,648)
sequence
gaattccaggcccaaacctagaccaattggtgggagaatgatgatcagtg
ctgctacccaacaggagaagatgaagttcttgcagactctgctattcatg
atggtcatgtagtgaagaggtttacagatggccacatatcgatcataaga
catgatagccaggagaaaaaattctgtaactgcaaagaggtctataaaca
acagttgactggcacaagcaatataggtaatggacttgtccccagatgat
atgctgtatagaaatcttggaatacaagcagttgtgagtgaaatttctaa
gaaggagaaatttttgagaaaaatatacataggtgttttaaggtgggggt
caatcagagtgagtgtgatgatggttaggttaccagataaactcaacatg
taagaagaaagcagaaagataaaaagcagaatttgcagccgaatatcatc
tgtgagacccaacaaaatgaaggttgttactgttcggtttctcattcttg
attcttgtctcttgcccaatctggctgaaaaatatcaaagattttatagg
acctcagtgttgtgtcaggtgccaatctcaagacaagctaacttgagtgt
catcgctgtattaccattggttaatgaagaagcatgtgcagagtacaatc
tgatgtttgaacatttctttgtgtcacataatagcttatatttgaatcat
acattccatactactatttttatgtgtctataatcttgctgtaattaata
tcagtttatcacacaatcttataaacatcgttccacaaaagtgtaccttt
aaattaatcgcttttggttcaacactcagcctttccctaacttcttttcc
cagaacagagttttaaaagagaaatactaaaataaatgaagaatgttctg
ttaagataatcttaacattatgctcatatttaatattagttattagctga
taaatacttttgcagtgcagtctacttactgtgtttaaagtactttttac
tgtggctatatatatagatattatatatagatataatatatagatatagg
atata
gaattcctcttgcttccagtgcccacagctgctgttgctccatcactctc
agggacagtggcagaactatctggtgcatcaacagtatctatccaattgc
acgtctctgtgtggagtcaagaaagacatcatcccaatgtcctttctcaa
ttaattccgtgttagttctggaaagctcggtcactgcttgtttatttcca
ggtttcggaagtaaaacagtttcaaaatcttgcttggcctcactgatctt
tccccaaaatgatcttgtggttccttttccggcaaacacttttgagtatg
aaccatctagtaagatatcttgtgtgcagactctttcagcttcttcatat
ttctgaatattgagatagaccatcgctctgttagctggtagtagagcatt
ggtgctgtctgctgccatccctcgatgtagcattcaagtgcttgcttata
tttcccctctttgaaaaatccattgcccaggtctttctctgcgatgacct
tctgcctgcccggctgatctttggtgggttttttctctcttgcagctggc
ttactcactgtagcagcttctttgggatgtgagttttccttgagcgttaa
tgcctgatcaattttcctgagttcatttgttgcttcaaagttatctggtt
ccagttctaacactttttcatatatttttttctggcatcctctaattgct
gcagagtaaatggagcagcacctcatctggcataagccttggtgtaactc
ctgctgaaggcaattgccaaattacagccagactcagcaacagcaaatct
ctgcctcttgagtgctgggattaaaggtatgtgccaccatgccaggtaat
tctttctttctttcttttctttctttctttcttctttctttctttctttc
tttctttctttctttctttcttggtgtgtgatttcaagagtataggctaa
gccagggcatgatggcacatgcatgccttcaatcctagcagtcagaaata
cagtggcaagaatttttgagtttcaggtcagtctagtctacatataacag
ctgcatattagatcttatcttcaaacacaaaagaaaggaacttacatctt
cccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128769360_128770433
seq2: B6Ng01-307B05.b_45_1099 (reverse)

seq1  TATATCTATATCTATATTATAT-CTATATCTATATATAATATCTATATAT  49
                       ||||| |||||||||||||| ||||||||||||
seq2  -----------------TATATCCTATATCTATATATTATATCTATATAT  33

seq1  AATATCTATATATAATAAGCCACAGTAAAAAGTACTTTAAACACAGTAAG  99
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  AATATCTATATATA--TAGCCACAGTAAAAAGTACTTTAAACACAGTAAG  81

seq1  TAGACTGCACCTGCAAAAGTATTTATCAGCTAATAACTAATATTAAATAT  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGCA-CTGCAAAAGTATTTATCAGCTAATAACTAATATTAAATAT  130

seq1  GAGCATAATGTTAAGATTATCTTAACAGAACATTCTTCATTTATTTTAGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATAATGTTAAGATTATCTTAACAGAACATTCTTCATTTATTTTAGT  180

seq1  ATTTCTCTTTTAAAACTCTGTTCTGGGAAAAGAAGTTAGGGAAAGGCTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTTTTAAAACTCTGTTCTGGGAAAAGAAGTTAGGGAAAGGCTGA  230

seq1  GTGTTGAACCAAAAGCGATTAATTTAAAGGTACACTTTTGTGGAACGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAACCAAAAGCGATTAATTTAAAGGTACACTTTTGTGGAACGATG  280

seq1  TTTATAAGATTGTGTGATAAACTGATATTAATTACAGCAAGATTATAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGATTGTGTGATAAACTGATATTAATTACAGCAAGATTATAGAC  330

seq1  ACATAAAAATAGTAGTATGGAATGTATGATTCAAATATAAGCTATTATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAATAGTAGTATGGAATGTATGATTCAAATATAAGCTATTATGT  380

seq1  GACACAAAGAAATGTTCAAACATCAGATTGTACTCTGCACATGCTTCTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAGAAATGTTCAAACATCAGATTGTACTCTGCACATGCTTCTTC  430

seq1  ATTAACCAATGGTAATACAGCGATGACACTCAAGTTAGCTTGTCTTGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCAATGGTAATACAGCGATGACACTCAAGTTAGCTTGTCTTGAGA  480

seq1  TTGGCACCTGACACAACACTGAGGTCCTATAAAATCTTTGATATTTTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACCTGACACAACACTGAGGTCCTATAAAATCTTTGATATTTTTCA  530

seq1  GCCAGATTGGGCAAGAGACAAGAATCAAGAATGAGAAACCGAACAGTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATTGGGCAAGAGACAAGAATCAAGAATGAGAAACCGAACAGTAAC  580

seq1  AACCTTCATTTTGTTGGGTCTCACAGATGATATTCGGCTGCAAATTCTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCATTTTGTTGGGTCTCACAGATGATATTCGGCTGCAAATTCTGC  630

seq1  TTTTTATCTTTCTGCTTTCTTCTTACATGTTGAGTTTATCTGGTAACCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCTTTCTGCTTTCTTCTTACATGTTGAGTTTATCTGGTAACCTA  680

seq1  ACCATCATCACACTCACTCTGATTGACCCCCACCTTAAAACACCTATGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCATCACACTCACTCTGATTGACCCCCACCTTAAAACACCTATGTA  730

seq1  TATTTTTCTCAAAAATTTCTCCTTCTTAGAAATTTCACTCACAACTGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTCAAAAATTTCTCCTTCTTAGAAATTTCACTCACAACTGCTT  780

seq1  GTATTCCAAGATTTCTATACAGCATATCATCTGGGGACAAGTCCATTACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCAAGATTTCTATACAGCATATCATCTGGGGACAAGTCCATTACC  830

seq1  TATATTGCTTGTGCCAGTCAACTGTTGTTTATAGACCTCTTTGCAGTTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCTTGTGCCAGTCAACTGTTGTTTATAGACCTCTTTGCAGTTAC  880

seq1  AGAATTTTTTCTCCTGGCTATCATGTCTTATGATCGATATGTGGCCATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTTTCTCCTGGCTATCATGTCTTATGATCGATATGTGGCCATCT  930

seq1  GTAAACCTCTTCACTACATGACCATCATGAATAGCAGAGTCTGCAAGAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCTCTTCACTACATGACCATCATGAATAGCAGAGTCTGCAAGAAC  980

seq1  TTCATCTTCTCCTGTTGGGTAGCAGCACTGATCATCATTCTCCCACCAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTCTCCTGTTGGGTAGCAGCACTGATCATCATTCTCCCACCAAT  1030

seq1  TGGTCTAGGTTTGGGCCTGGAATTC  1074
      |||||||||||||||||||||||||
seq2  TGGTCTAGGTTTGGGCCTGGAATTC  1055

seq1: chr10_128669542_128670648
seq2: B6Ng01-307B05.g_64_1168

seq1  GAATTCCTCTTGCTTCCAGTGCCCACAGCTGCTGTTGCTCCATCACTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTGCTTCCAGTGCCCACAGCTGCTGTTGCTCCATCACTCTC  50

seq1  AGGGACAGTGGCAGAACTATCTGGTGCATCAACAGTATCTATCCAATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGTGGCAGAACTATCTGGTGCATCAACAGTATCTATCCAATTGC  100

seq1  ACGTCTCTGTGTGGAGTCAAGAAAGACATCATCCCAATGTCCTTTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTCTGTGTGGAGTCAAGAAAGACATCATCCCAATGTCCTTTCTCAA  150

seq1  TTAATTCCGTGTTAGTTCTGGAAAGCTCGGTCACTGCTTGTTTATTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCCGTGTTAGTTCTGGAAAGCTCGGTCACTGCTTGTTTATTTCCA  200

seq1  GGTTTCGGAAGTAAAACAGTTTCAAAATCTTGCTTGGCCTCACTGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCGGAAGTAAAACAGTTTCAAAATCTTGCTTGGCCTCACTGATCTT  250

seq1  TCCCCAAAATGATCTTGTGGTTCCTTTTCCGGCAAACACTTTTGAGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAATGATCTTGTGGTTCCTTTTCCGGCAAACACTTTTGAGTATG  300

seq1  AACCATCTAGTAAGATATCTTGTGTGCAGACTCTTTCAGCTTCTTCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTAGTAAGATATCTTGTGTGCAGACTCTTTCAGCTTCTTCATAT  350

seq1  TTCTGAATATTGAGATAGACCATCGCTCTGTTAGCTGGTAGTAGAGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATATTGAGATAGACCATCGCTCTGTTAGCTGGTAGTAGAGCATT  400

seq1  GGTGCTGTCTGCTGCCATCCCTCGATGTAGCATTCAAGTGCTTGCTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTCTGCTGCCATCCCTCGATGTAGCATTCAAGTGCTTGCTTATA  450

seq1  TTTCCCCTCTTTGAAAAATCCATTGCCCAGGTCTTTCTCTGCGATGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTCTTTGAAAAATCCATTGCCCAGGTCTTTCTCTGCGATGACCT  500

seq1  TCTGCCTGCCCGGCTGATCTTTGGTGGGTTTTTTCTCTCTTGCAGCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCCCGGCTGATCTTTGGTGGGTTTTTTCTCTCTTGCAGCTGGC  550

seq1  TTACTCACTGTAGCAGCTTCTTTGGGATGTGAGTTTTCCTTGAGCGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCACTGTAGCAGCTTCTTTGGGATGTGAGTTTTCCTTGAGCGTTAA  600

seq1  TGCCTGATCAATTTTCCTGAGTTCATTTGTTGCTTCAAAGTTATCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATCAATTTTCCTGAGTTCATTTGTTGCTTCAAAGTTATCTGGTT  650

seq1  CCAGTTCTAACACTTTTTCATATATTTTTTTCTGGCATCCTCTAATTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTAACACTTTTTCATATATTTTTTTCTGGCATCCTCTAATTGCT  700

seq1  GCAGAGTAAATGGAGCAGCACCTCATCTGGCATAAGCCTTGGTGTAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAAATGGAGCAGCACCTCATCTGGCATAAGCCTTGGTGTAACTC  750

seq1  CTGCTGAAGGCAATTGCCAAATTACAGCCAGACTCAGCAACAGCAAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAGGCAATTGCCAAATTACAGCCAGACTCAGCAACAGCAAATCT  800

seq1  CTGCCTCTTGAGTGCTGGGATTAAAGGTATGTGCCACCATGCCAGGTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGCCTCTTGAGTGCTGGGATTAAAGGTATGTGCCACCATGCCAGGTAA-  849

seq1  TTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  900
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTTTC-TTTCTTTCTTTTCTTTCTTTCTTTC-TTCTTTCTTTCTTTCT  897

seq1  TTCTTTCTTTCTTTCTTTCTTTGT--GTGTGTGATTTCAAGAGTATAGGC  948
      |||||||||||||||||||||| |  ||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTGGTGTGTGATTTCAAGAGTATAGGC  947

seq1  TAAGCCA-GGCATGATGGCACATGCATGCCTTCAATCCTAGCAGTCAG-A  996
      ||||||| |||||||||||||||||||||||||||||||||||||||| |
seq2  TAAGCCAGGGCATGATGGCACATGCATGCCTTCAATCCTAGCAGTCAGAA  997

seq1  ATACAAGTGGCAAG-ATTTTTGAGTTTCAGGTCAGTCTAGTCTACATAAT  1045
      |||| ||||||||| |||||||||||||||||||||||||||||||| ||
seq2  ATAC-AGTGGCAAGAATTTTTGAGTTTCAGGTCAGTCTAGTCTACAT-AT  1045

seq1  AACAGCTGCATAATAGGATCTTATCTCAAAACCACAAAAGAAAAGGAAAC  1095
      |||||||||||| || ||||||||||  ||| |||||||| |||||||  
seq2  AACAGCTGCATATTA-GATCTTATCTTCAAA-CACAAAAG-AAAGGAACT  1092

seq1  TACATC-TCCCAC  1107
      |||||| ||||||
seq2  TACATCTTCCCAC  1105