BAC Information

Click to search

BAC

Clone NameB6Ng01-307L21
Chromosome10 (Build37)
Map Location 19,683,697 - 19,877,840
singlet/doubletdoublet
Overlap geneMap3k5, Mtap7
Upstream geneTnfaip3, Tpi-rs5, EG637620, Olig3, Ifngr1, Il22ra2, Il20ra, Slc35d3, Pex7
Downstream geneEG621697, Bclaf1, 2610016C23Rik, LOC382344, Pde7b, LOC667202, Ahi1, Myb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307L21.bB6Ng01-307L21.g
ACCGA100435GA100436
length725659
definitionB6Ng01-307L21.b B6Ng01-307L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,877,120 - 19,877,840)(19,683,697 - 19,684,354)
sequence
gaattcatctgatttataagtaaataattagctgggctgtggtggcgcac
gcctttaatcccagcacttgggaggcagaggcaggcagatttctgagttc
gaggccaacctggtctacagattgagttccaggatagccagggctacaaa
gaaaaaccctgtctcgggaagaaaaagaaaaaaaaagataaataattatg
catttcagcgctatcccgcatggtttggagaaagggggttcttgctagaa
ttttaccttgaaatttgaacttaccctagagtctagcttctttctatatt
cgatgtggtgtcagtgaccccattttacaacacagtacaggatgggtctg
ataccagaaagccaactttaaaaaggaggtttggctggcaattgttagaa
agccacagaattttaaggtacctcatacggtaatgttctaaacttagacc
caggattttattaacaatcttgcaaagtgcagttcacagatggcatctac
ttgcaagttcccactctttccttcgggttgctgtgcccacctgtactgtc
tggtttagttctgccaaccctgggctttttctcaggcaactggcttttca
tattaagctcgcacaaaagtttcattttggcctttccatacgcatattat
actgtcttcattcatctccagggcttgtcccccctaccccacccccacgt
tgctggttccccctccctaaatgcc
gaattcagttcctttgactagtatgtaattccatctttacgacaatgttg
ttgtaatcccagaataaacatttaacatgcataggaattcaggatggtag
gtcttttggaggcctaatctaaagtgagggctgtaggatcattagccaga
agtgcaaatggagcaatgggagaagggcatgcaggaggtggagcccagta
cagccatgacagaagggtggcccttcactggagttagaaactgagacaac
tctaactaccaggggtcccagatgagaggaacattccgagccatcattct
gacaagcgtagctgaaaagttatagcatgaaaatttggaacttcaacaac
tcctgaaatcgcttagtaaacaccattcctggaagagcagccatgggaag
tcttacattcttcatctgagtctcagaaaatggagacagttgggtaaaca
cactgcatgccttggacttggtacagctttcttcaggaggaggaggagga
ggaggaagtctgtgagaatgacagatttgggacaagtttctccatcactc
gaaaaaataaagaagcataacttggaagtctagactcaagactgctttaa
aagaggaattatttttaaaattggtgtgtgtgtgtgtgtgtacctgttgc
acaccccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_19877120_19877840
seq2: B6Ng01-307L21.b_52_776 (reverse)

seq1  GGCATTTAGGGAGGGGGAACCAGCAACGTGGGGGT-GGGTA-GGGGGACA  48
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  GGCATTTAGGGAGGGGGAACCAGCAACGTGGGGGTGGGGTAGGGGGGACA  50

seq1  AGCCCTGGAGATGAATGAAGACAGTATAATATGCGTATGGAAAGGCCAAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGAGATGAATGAAGACAGTATAATATGCGTATGGAAAGGCCAAA  100

seq1  ATGAAAC-TTTGTGCGAGCTTAATATGAAAAGCCAGTTGCCTGAGAAAAA  147
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTTTTGTGCGAGCTTAATATGAAAAGCCAGTTGCCTGAGAAAAA  150

seq1  GCCCAGGGTTGGCAGAACT-AACCAGACAGTACAGGTGGGCACAGCAACC  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCCCAGGGTTGGCAGAACTAAACCAGACAGTACAGGTGGGCACAGCAACC  200

seq1  CGAAGGAAAGAGTGGGAACTTGCAAGTAGATGCCATCTGTGAACTGCACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGAAAGAGTGGGAACTTGCAAGTAGATGCCATCTGTGAACTGCACT  250

seq1  TTGCAAGATTGTTAATAAAATCCTGGGTCTAAGTTTAGAACATTACCGTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGATTGTTAATAAAATCCTGGGTCTAAGTTTAGAACATTACCGTA  300

seq1  TGAGGTACCTTAAAATTCTGTGGCTTTCTAACAATTGCCAGCCAAACCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTACCTTAAAATTCTGTGGCTTTCTAACAATTGCCAGCCAAACCTC  350

seq1  CTTTTTAAAGTTGGCTTTCTGGTATCAGACCCATCCTGTACTGTGTTGTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAGTTGGCTTTCTGGTATCAGACCCATCCTGTACTGTGTTGTA  400

seq1  AAATGGGGTCACTGACACCACATCGAATATAGAAAGAAGCTAGACTCTAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGGTCACTGACACCACATCGAATATAGAAAGAAGCTAGACTCTAG  450

seq1  GGTAAGTTCAAATTTCAAGGTAAAATTCTAGCAAGAACCCCCTTTCTCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTTCAAATTTCAAGGTAAAATTCTAGCAAGAACCCCCTTTCTCCA  500

seq1  AACCATGCGGGATAGCGCTGAAATGCATAATTATTTATCTTTTTTTTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGCGGGATAGCGCTGAAATGCATAATTATTTATCTTTTTTTTTCT  550

seq1  TTTTCTTCCCGAGACAGGGTTTTTCTTTGTAGCCCTGGCTATCCTGGAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCCGAGACAGGGTTTTTCTTTGTAGCCCTGGCTATCCTGGAAC  600

seq1  TCAATCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCTGCCTGCCTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCTGCCTGCCTCTG  650

seq1  CCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACAGCCCAGCTAATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACAGCCCAGCTAATT  700

seq1  ATTTACTTATAAATCAGATGAATTC  721
      |||||||||||||||||||||||||
seq2  ATTTACTTATAAATCAGATGAATTC  725

seq1: chr10_19683697_19684354
seq2: B6Ng01-307L21.g_67_725

seq1  GAATTCAGTTCCTTTGACTAGTATGTAATTCCATCTTTACGACAATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCTTTGACTAGTATGTAATTCCATCTTTACGACAATGTTG  50

seq1  TTGTAATCCCAGAATAAACATTTAACATGCATAGGAATTCAGGATGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCCCAGAATAAACATTTAACATGCATAGGAATTCAGGATGGTAG  100

seq1  GTCTTTTGGAGGCCTAATCTAAAGTGAGGGCTGTAGGATCATTAGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGGAGGCCTAATCTAAAGTGAGGGCTGTAGGATCATTAGCCAGA  150

seq1  AGTGCAAATGGAGCAATGGGAGAAGGGCATGCAGGAGGTGGAGCCCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAATGGAGCAATGGGAGAAGGGCATGCAGGAGGTGGAGCCCAGTA  200

seq1  CAGCCATGACAGAAGGGTGGCCCTTCACTGGAGTTAGAAACTGAGACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGACAGAAGGGTGGCCCTTCACTGGAGTTAGAAACTGAGACAAC  250

seq1  TCTAACTACCAGGGGTCCCAGATGAGAGGAACATTCCGAGCCATCATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTACCAGGGGTCCCAGATGAGAGGAACATTCCGAGCCATCATTCT  300

seq1  GACAAGCGTAGCTGAAAAGTTATAGCATGAAAATTTGGAACTTCAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCGTAGCTGAAAAGTTATAGCATGAAAATTTGGAACTTCAACAAC  350

seq1  TCCTGAAATCGCTTAGTAAACACCATTCCTGGAAGAGCAGCCATGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAATCGCTTAGTAAACACCATTCCTGGAAGAGCAGCCATGGGAAG  400

seq1  TCTTACATTCTTCATCTGAGTCTCAGAAAATGGAGACAGTTGGGTAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATTCTTCATCTGAGTCTCAGAAAATGGAGACAGTTGGGTAAACA  450

seq1  CACTGCATGCCTTGGACTTGGTACAGCTTTCTTCAGGAGGAGGAGGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATGCCTTGGACTTGGTACAGCTTTCTTCAGGAGGAGGAGGAGGA  500

seq1  GGAGGAAGTCTGTGAGAATGACAGATTTGGGACAAGTTTCTCCATCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGTCTGTGAGAATGACAGATTTGGGACAAGTTTCTCCATCACTC  550

seq1  GAAAAAATAAAGAAGCATAACTTGGAAGTCTAGACTCAAGACTGCTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAAAGAAGCATAACTTGGAAGTCTAGACTCAAGACTGCTTTAA  600

seq1  AAGAGGAATTATTTTTAAAATTGGTGTGTGTGTGTGTGTGTACCTG-TGC  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGAGGAATTATTTTTAAAATTGGTGTGTGTGTGTGTGTGTACCTGTTGC  650

seq1  ACACCCCCA  658
      |||||||||
seq2  ACACCCCCA  659