BAC Information

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BAC

Clone NameB6Ng01-307M03
Chromosome10 (Build37)
Map Location 129,576,344 - 129,715,850
singlet/doubletdoublet
Overlap geneLOC672405, Olfr825, Olfr826, Olfr827, Neurod4
Upstream geneOlfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824
Downstream gene5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307M03.bB6Ng01-307M03.g
ACCGA100447GA100448
length1,1141,143
definitionB6Ng01-307M03.b B6Ng01-307M03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,714,741 - 129,715,850)(129,576,344 - 129,577,498)
sequence
gaattccatgcagtaattctccaaatagtagaaacatacaatggctatga
tactatgtagttagtgtctatgacaaatacctgttcaaaacagattttaa
agtggaaaaaatgagaataatattttaaatagagaaaataactcaaaact
gagatcttattgaaggaaatgtggaaatccaaatactaatgtcaaagact
agaatggactttataagatcagaatgagtttgcacatattgggggtagta
taattccatattcaaaagctagtatttattaatactttttagctacaatg
gttttatctctatgttctatgaagcagaaccatagcctttaatatccaca
caatatccacaaaacactaaaacaattttgctatgttcatctcacacttt
agtgacaagaaagtatcttagttttgtgtttctttcgggatacctataag
atggcattaacatccaggttaaagggtgaattaggttttgggttttgctc
tgaagagaatccacttaagttttattaataaaaaattagaagtggatcat
atatattttcaacactcagatctgagttttgttttctttgtctatcatgt
gataccttgaaaatattaaaactagaaatagagaaagcccatttaatctt
cagaaagttctggcttttgcttctatctgtgagatacttcaccttttctc
tggagctcatggaggaattgtattgctcatattgtgaaccaatgataaaa
cagtcctactagatgaggtcttctgcattccatcagaaatttgatgaaca
tgtaactaagaataaatatcaagtcaatttttttctgcatgagaattttc
cctctttcatctcccttcatctacacaaatataaacagaataaaaatttg
ggaagataatttcatgtctgactgtagaggcatctgatagagcttggaaa
tcttcattcatcccttttagtcccacaggatccttttgatatttagcttc
atattacatgggtaagtaggagtttttataaacaccttaaaacaaaaact
gaaataagaatcattgatctcatgggtcctggaatagccataaacacata
tttataataatatg
gaattcagcagagctgagttcatccaatgtcctgaggatatctctagaga
gaactccaaaggacaggacgtcttgaaaaagaattgcattccttgtaagg
attgatatactcagaattagagatgattttcagtgtttctggtttagatc
tattagctgtctaaaaactatctcagtagtttccaccaccaccttggtgt
gtgcactgtcatgtgtctccctgtgtgccttctcgctcacatgcaggcag
gataaaatatatctaaaacagtcgctcttgaattcgacctataaaactat
caggaaaaaaattctgtatttcttttcagaattttttttcaacatctttt
taagctagatgtcctcttagcataaaggaggggtaaattcagaagcacac
catagaatatttatcacatgggtaggtagcgcccagagaagaactggact
tctcctacctgtccctggctgaaatcatcttgattttgattggacagttg
ccagagtcattaacatagtgtaaccacacctcctagaagtgaacagaact
tggcaggacctgatccagagctgacacttgtatgacacctggacaagaag
ttggagaaagaaggactcaggagcactgaaggtggaaaggctttgaaaaa
taagcccttcagctgcttttgtggacagagttctgagacttggagctctc
tagacatctctgacaatttgagtggagaagagcctgtgttaagccaacct
tatcgtggaactggacaactttgatcctaaagacaaagagatactgagct
gggatattaacgacatgaaactgcctcagaatgtgaaaaagattgactgg
ttcctggagtgaccagactacagtgaaacacatttaccgctcggacgacc
tgaacgcacagtgccacctgagcagctgggccatgtgcaacaccaaaaca
actcccgaattctcagactcatgcctgagggtagtggtgtgcagcagaga
ctgttccacgaagaggctgcagatttatctgagactcacatctgttgaca
agctagcagagcagcagaggaaaagcttccccactgcagtgggcccatga
actcattccgctgaggcattccatggattcggcagcagcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129714741_129715850
seq2: B6Ng01-307M03.b_47_1160 (reverse)

seq1  CATATAATTATAAAATATGTGTTTAATGCTAATTTCAGGA-CCATGAAGA  49
      ||||| ||||| |||||||||||||  ||| ||| ||||| ||||| |||
seq2  CATATTATTAT-AAATATGTGTTTATGGCT-ATTCCAGGACCCATG-AGA  47

seq1  TCAATGAT--CTATTTCAGTTTTTGTTTTAAGGTGTTTAT-AAAACTCCT  96
      ||||||||   ||||||||||||||||||||||||||||| |||||||||
seq2  TCAATGATTCTTATTTCAGTTTTTGTTTTAAGGTGTTTATAAAAACTCCT  97

seq1  ACTTACCCATGTAATAATGAAGCTAAATATCAAA--GATCCTGTGGGACT  144
      ||||||||||||||| ||||||||||||||||||  ||||||||||||||
seq2  ACTTACCCATGTAAT-ATGAAGCTAAATATCAAAAGGATCCTGTGGGACT  146

seq1  AAAAGGGATGAATGAAGA-TTCCAAGCTCTATCAGATGCCTCTACAGTCA  193
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAGGGATGAATGAAGATTTCCAAGCTCTATCAGATGCCTCTACAGTCA  196

seq1  GACATGAAATTATCTT-CCAAATTTTTATTCTGTTTATATTTGTGTAGAT  242
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GACATGAAATTATCTTCCCAAATTTTTATTCTGTTTATATTTGTGTAGAT  246

seq1  GAAGGGAGATGAAAGAGGGAAAATTCTCATGCAGAAAAAAATTGACTTGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGATGAAAGAGGGAAAATTCTCATGCAGAAAAAAATTGACTTGA  296

seq1  TATTTATTCTTAGTTACATGTTCATCAAATTTCTGATGGAATGCAGAAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTCTTAGTTACATGTTCATCAAATTTCTGATGGAATGCAGAAGA  346

seq1  CCTCATCTAGTAGGACTGTTTTATCATTGGTTCACAATATGAGCAATACA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCTAGTAGGACTGTTTTATCATTGGTTCACAATATGAGCAATACA  396

seq1  ATTCCTCCATGAGCTCCAGAGAAAAGGTGAAGTATCTCACAGATAGAAGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCATGAGCTCCAGAGAAAAGGTGAAGTATCTCACAGATAGAAGC  446

seq1  AAAAGCCAGAACTTTCTGAAGATTAAATGGGCTTTCTCTATTTCTAGTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAGAACTTTCTGAAGATTAAATGGGCTTTCTCTATTTCTAGTTT  496

seq1  TAATATTTTCAAGGTATCACATGATAGACAAAGAAAACAAAACTCAGATC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCAAGGTATCACATGATAGACAAAGAAAACAAAACTCAGATC  546

seq1  TGAGTGTTGAAAATATATATGATCCACTTCTAATTTTTTATTAATAAAAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTGAAAATATATATGATCCACTTCTAATTTTTTATTAATAAAAC  596

seq1  TTAAGTGGATTCTCTTCAGAGCAAAACCCAAAACCTAATTCACCCTTTAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGATTCTCTTCAGAGCAAAACCCAAAACCTAATTCACCCTTTAA  646

seq1  CCTGGATGTTAATGCCATCTTATAGGTATCCCGAAAGAAACACAAAACTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGTTAATGCCATCTTATAGGTATCCCGAAAGAAACACAAAACTA  696

seq1  AGATACTTTCTTGTCACTAAAGTGTGAGATGAACATAGCAAAATTGTTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTTTCTTGTCACTAAAGTGTGAGATGAACATAGCAAAATTGTTTT  746

seq1  AGTGTTTTGTGGATATTGTGTGGATATTAAAGGCTATGGTTCTGCTTCAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTGTGGATATTGTGTGGATATTAAAGGCTATGGTTCTGCTTCAT  796

seq1  AGAACATAGAGATAAAACCATTGTAGCTAAAAAGTATTAATAAATACTAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATAGAGATAAAACCATTGTAGCTAAAAAGTATTAATAAATACTAG  846

seq1  CTTTTGAATATGGAATTATACTACCCCCAATATGTGCAAACTCATTCTGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAATATGGAATTATACTACCCCCAATATGTGCAAACTCATTCTGA  896

seq1  TCTTATAAAGTCCATTCTAGTCTTTGACATTAGTATTTGGATTTCCACAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAAGTCCATTCTAGTCTTTGACATTAGTATTTGGATTTCCACAT  946

seq1  TTCCTTCAATAAGATCTCAGTTTTGAGTTATTTTCTCTATTTAAAATATT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCAATAAGATCTCAGTTTTGAGTTATTTTCTCTATTTAAAATATT  996

seq1  ATTCTCATTTTTTCCACTTTAAAATCTGTTTTGAACAGGTATTTGTCATA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATTTTTTCCACTTTAAAATCTGTTTTGAACAGGTATTTGTCATA  1046

seq1  GACACTAACTACATAGTATCATAGCCATTGTATGTTTCTACTATTTGGAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAACTACATAGTATCATAGCCATTGTATGTTTCTACTATTTGGAG  1096

seq1  AATTACTGCATGGAATTC  1110
      ||||||||||||||||||
seq2  AATTACTGCATGGAATTC  1114

seq1: chr10_129576344_129577498
seq2: B6Ng01-307M03.g_66_1208

seq1  GAATTCAGCAGAGCTGAGTTCATCCAATGTCCTGAGGATATCTCTAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAGCTGAGTTCATCCAATGTCCTGAGGATATCTCTAGAGA  50

seq1  GAACTCCAAAGGACAGGACGTCTTGAAAAAGAATTGCATTCCTTGTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCAAAGGACAGGACGTCTTGAAAAAGAATTGCATTCCTTGTAAGG  100

seq1  ATTGATATACTCAGAATTAGAGATGATTTTCAGTGTTTCTGGTTTAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATACTCAGAATTAGAGATGATTTTCAGTGTTTCTGGTTTAGATC  150

seq1  TATTAGCTGTCTAAAAACTATCTCAGTAGTTTCCACCACCACCTTGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCTGTCTAAAAACTATCTCAGTAGTTTCCACCACCACCTTGGTGT  200

seq1  GTGCACTGTCATGTGTCTCCCTGTGTGCCTTCTCGCTCACATGCAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGTCATGTGTCTCCCTGTGTGCCTTCTCGCTCACATGCAGGCAG  250

seq1  GATAAAATATATCTAAAACAGTCGCTCTTGAATTCGACCTATAAAACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATATATCTAAAACAGTCGCTCTTGAATTCGACCTATAAAACTAT  300

seq1  CAGGAAAAAAATTCTGTATTTCTTTTCAGAATTTTTTTTCAACATCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAAAATTCTGTATTTCTTTTCAGAATTTTTTTTCAACATCTTTT  350

seq1  TAAGCTAGATGTCCTCTTAGCATAAAGGAGGGGTAAATTCAGAAGCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAGATGTCCTCTTAGCATAAAGGAGGGGTAAATTCAGAAGCACAC  400

seq1  CATAGAATATTTATCACATGGGTAGGTAGCGCCCAGAGAAGAACTGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATATTTATCACATGGGTAGGTAGCGCCCAGAGAAGAACTGGACT  450

seq1  TCTCCTACCTGTCCCTGGCTGAAATCATCTTGATTTTGATTGGACAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACCTGTCCCTGGCTGAAATCATCTTGATTTTGATTGGACAGTTG  500

seq1  CCAGAGTCATTAACATAGTGTAACCACACCTCCTAGAAGTGAACAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCATTAACATAGTGTAACCACACCTCCTAGAAGTGAACAGAACT  550

seq1  TGGCAGGACCTGATCCAGAGCTGACACTTGTATGACACCTGGACAAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGACCTGATCCAGAGCTGACACTTGTATGACACCTGGACAAGAAG  600

seq1  TTGGAGAAAGAAGGACTCAGGAGCACTGAAGGTGGAAAGGCTTTGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAAAGAAGGACTCAGGAGCACTGAAGGTGGAAAGGCTTTGAAAAA  650

seq1  TAAGCCCTTCAGCTGCTTTTGTGGACAGAGTTCTGAGACTTGGAGCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCTTCAGCTGCTTTTGTGGACAGAGTTCTGAGACTTGGAGCTCTC  700

seq1  TAGACATCTCTGACAATTTGAGTGGAGAAGAGCCTGTGTTAAGCCAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATCTCTGACAATTTGAGTGGAGAAGAGCCTGTGTTAAGCCAACCT  750

seq1  TATCGTGGAACTGGACAACTTTGATCCTAAAGACAAAGAGATACTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTGGAACTGGACAACTTTGATCCTAAAGACAAAGAGATACTGAGCT  800

seq1  GGGATATTAACGACATGAAACTGCCTCAGAATGTGAAAAAGATTGACTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATTAACGACATGAAACTGCCTCAGAATGTGAAAAAGATTGACTGG  850

seq1  TTCCTGGAGTGACCAGACTACAGTGAAACACATTTACCGCTCGGACGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGAGTGACCAGACTACAGTGAAACACATTTACCGCTCGGACGACC  900

seq1  TGAACGCACAGTGCCACCTGAGCAGCTGGGCCATGTGCAACACCAAAAAC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAACGCACAGTGCCACCTGAGCAGCTGGGCCATGTGCAACACC-AAAAC  949

seq1  AACTCCCGAATTCTCAAGAACTCATGCCTGAGGGTAGTGGTGTGCAGCAG  1000
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  AACTCCCGAATTCTCA--GACTCATGCCTGAGGGTAGTGGTGTGCAGCAG  997

seq1  AGGACTGTTCCACGAAGGAAGGCTGCAAGATTTATCTGAGACTCACAATC  1050
      | |||||||||||||||  ||||||| ||||||||||||||||||| |||
seq2  A-GACTGTTCCACGAAG--AGGCTGC-AGATTTATCTGAGACTCAC-ATC  1042

seq1  TG-TGACAAAGCTAGGCAGAGCAGCAGAGGAAAAGCTTCCCCAACTGCAG  1099
      || |||| |||||| ||||||||||||||||||||||||||| |||||||
seq2  TGTTGAC-AAGCTA-GCAGAGCAGCAGAGGAAAAGCTTCCCC-ACTGCAG  1089

seq1  TGGGCCCTTGAAACTCATTCCCGGCTGAGGCCATCCATGG--TCGGCCAG  1147
      ||||||| || ||||||||||  ||||||||  |||||||  |||| |||
seq2  TGGGCCCATG-AACTCATTCC--GCTGAGGCATTCCATGGATTCGG-CAG  1135

seq1  CAGCTTCC  1155
      ||||||||
seq2  CAGCTTCC  1143