BAC Information

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BAC

Clone NameB6Ng01-307N08
Chromosome10 (Build37)
Map Location 108,735,495 - 108,736,534
singlet/doubletsinglet
Overlap genenone
Upstream genePawr, EG667814, Syt1, EG368203
Downstream geneNav3, LOC100042497, LOC100042502, LOC100042506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307N08.bB6Ng01-307N08.g
ACCGA100499GA100500
length1,0571,144
definitionB6Ng01-307N08.b B6Ng01-307N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagaggaaagggcagatgtaagatgtcttgtcaggttacaggc
ctaacttaatcatggatatgcaatagtgttaaatataattaagagccaaa
gtaaaacaatttagaacggagcaggaattcacagtgagaatcagggaaat
cccatattttattgccatgaccagctcacatttccaagcagctatgaaag
acatgaaattcttgagtaataaataatgtcccaacaatctcctgagaggt
cactcagtctttagtaatgaatagctttgcttctgttaaatgaaagccaa
ttgttatatgaccaaattgtgtgtgtgtgtgtgtatgtggtggggcataa
atgtgcaaacccctgtatgcctgtgtgggtttataggtattctatttcaa
gtcctccctgagtcctttacataacagagaaagaataaagaacataattt
catcccaccagagcactccaagtgctccgagcagatattccctcttctaa
gaaagcaatatgccttgagactttgatttgaaccctgtgtttgacccctt
tagagaacaacatatcccctctggcttctcttcatgaagcctgtgcctgg
cttgtgtttagcagctttcttgggcaggtctaacctgttaagaattggat
tcatcacattttttcatagatgctctctggctgaagacttctctttagaa
tcttaattgagttttcaccatcaagacattaggaaaagcagcaaatgttg
tctcttggtcatatcacagatcgttctacacacatgaatttagacctggg
ccttcaatgttaagaaagattttttttttccccatctgcggaaatttcta
aaatttttatctcttcttgtgtgtgtgaccaagtattttatattctggtg
caactaactaccatgtggggaattgatccctgtgcaaaaaaaaaaaaaaa
agattttttctcccccttcacatcacagttgactgcttaaaaattatttt
ttatgcagaagtttttcctggatttggaaatagattaatacagtagttag
cctaaaa
gaattcaagaaggtagactccagaaaatcaaataaccccattaaaaaatg
gggctcagagctaaacaaagaattctcccctgaggaataccgaatggctg
agaagcacctgaaaaaatgttcagcacccttaatcatcagagaaatgcaa
ataaaaacaaccctgagattccatctcacaccagtcagaatggctaagat
caaaaatttgggtaacagcagatgctggcgaggatgtggagaaagaggaa
cagtcttccattgttggtgggattgcaagcttgtacaaccactctggaaa
tcagtctggcggttcctcagaaaattggacatagtactaccagaggatcc
agcaacacctctcctgggcatatatccagaagatgtcccaaccggtaaga
aggacacatgttccactatgttcatagcagccttatttataatagctaga
agctggaaagaacccagatacccctcaacagaggaatggatacaaaaaat
gtggtacatttacacaatggagtactactactcagctattaaaaggaatg
aatttatgaaattcctaggcaaatggttggacctggagggcatcatcctg
agtgaggtaacacaatcacaaaagaactcaaatgacatgtactcactgat
aagtgtatattagcccagaaacttagtatacctgagatataaaatacaat
ttgcaaaacacatgaaactgaagaagaacgaggaccaaagtgtggacact
ttgccccttcttagaattggaaacaatcacccatggaaggagttacagag
acaaagtttggagctgagacaaaaggatgaaccatctagagactgccatt
tctagggatccatcccataattagtctccaaatgctgacaccattgcata
cactagcaagcgtttgctgaaaggaccctgatatagctgtctcttgtgag
actaggcaggggcctagcaaacaacataagtggatgctcacagtcagcta
tggatggatcacaggtccctcatgagagctagagaaagcacccgagacta
aacgactgcaccttatagtgaccacatatgataatcagtacccggaactc
tggtctctagctgcattgtaatcaaaaagaaatgtgccctagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108735495_108736534
seq2: B6Ng01-307N08.b_47_1103

seq1  GAATTCTGAGAGGAAAGGGCAGATGTAAGATGTCTTGTCAGGTTACAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAGGAAAGGGCAGATGTAAGATGTCTTGTCAGGTTACAGGC  50

seq1  CTAACTTAATCATGGATATGCAATAGTGTTAAATATAATTAAGAGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTAATCATGGATATGCAATAGTGTTAAATATAATTAAGAGCCAAA  100

seq1  GTAAAACAATTTAGAACGGAGCAGGAATTCACAGTGAGAATCAGGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACAATTTAGAACGGAGCAGGAATTCACAGTGAGAATCAGGGAAAT  150

seq1  CCCATATTTTATTGCCATGACCAGCTCACATTTCCAAGCAGCTATGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTTATTGCCATGACCAGCTCACATTTCCAAGCAGCTATGAAAG  200

seq1  ACATGAAATTCTTGAGTAATAAATAATGTCCCAACAATCTCCTGAGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAATTCTTGAGTAATAAATAATGTCCCAACAATCTCCTGAGAGGT  250

seq1  CACTCAGTCTTTAGTAATGAATAGCTTTGCTTCTGTTAAATGAAAGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTCTTTAGTAATGAATAGCTTTGCTTCTGTTAAATGAAAGCCAA  300

seq1  TTGTTATATGACCAAATTGTGTGTGTGTGTGTGTATGTGGTGGGGCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATATGACCAAATTGTGTGTGTGTGTGTGTATGTGGTGGGGCATAA  350

seq1  ATGTGCAAACCCCTGTATGCCTGTGTGGGTTTATAGGTATTCTATTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAAACCCCTGTATGCCTGTGTGGGTTTATAGGTATTCTATTTCAA  400

seq1  GTCCTCCCTGAGTCCTTTACATAACAGAGAAAGAATAAAGAACATAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCCTGAGTCCTTTACATAACAGAGAAAGAATAAAGAACATAATTT  450

seq1  CATCCCACCAGAGCACTCCAAGTGCTCCGAGCAGATATTCCCTCTTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACCAGAGCACTCCAAGTGCTCCGAGCAGATATTCCCTCTTCTAA  500

seq1  GAAAGCAATATGCCTTGAGACTTTGATTTGAACCCTGTGTTTGACCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAATATGCCTTGAGACTTTGATTTGAACCCTGTGTTTGACCCCTT  550

seq1  TAGAGAACAACATATCCCCTCTGGCTTCTCTTCATGAAGCCTGTGCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAACAACATATCCCCTCTGGCTTCTCTTCATGAAGCCTGTGCCTGG  600

seq1  CTTGTGTTTAGCAGCTTTCTTGGGCAGGTCTAACCTGTTAAGAATTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTAGCAGCTTTCTTGGGCAGGTCTAACCTGTTAAGAATTGGAT  650

seq1  TCATCACATTTTTTCATAGATGCTCTCTGGCTGAAGACTTCTCTTTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACATTTTTTCATAGATGCTCTCTGGCTGAAGACTTCTCTTTAGAA  700

seq1  TCTTAATTGAGTTTTCACCATCAAGACATTAGGAAAAGCAGCAAATGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTGAGTTTTCACCATCAAGACATTAGGAAAAGCAGCAAATGTTG  750

seq1  TCTCTTGGTCATATCACAGATCGTTCTACACACATGAATTTAGACCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGTCATATCACAGATCGTTCTACACACATGAATTTAGACCTGGG  800

seq1  CCTTCAATGTTAAGAAAGA-TTTTTTTTTCCCCATCTGCGGAAA-TTCTA  848
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  CCTTCAATGTTAAGAAAGATTTTTTTTTTCCCCATCTGCGGAAATTTCTA  850

seq1  AAA-TTTTATCTCTTCTTGTGTGTGTGACCAAGTA-TTTATATTCTGGTG  896
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAATTTTTATCTCTTCTTGTGTGTGTGACCAAGTATTTTATATTCTGGTG  900

seq1  CAACTAACTACCATGT-GGGAATTGATCCCTGTGC-AAAAAAAAAAAAAA  944
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  CAACTAACTACCATGTGGGGAATTGATCCCTGTGCAAAAAAAAAAAAAAA  950

seq1  AGATTTT---TCCCCCCTCACATCACAGTTGACTGCTTAAAAATTA--TT  989
      |||||||   |||||| |||||||||||||||||||||||||||||  ||
seq2  AGATTTTTTCTCCCCCTTCACATCACAGTTGACTGCTTAAAAATTATTTT  1000

seq1  TTATGCAGAAGTTTT--CTTGATT--GAAATAGATT-ATACAGTAG-TAG  1033
      |||||||||||||||  || ||||  |||||||||| ||||||||| |||
seq2  TTATGCAGAAGTTTTTCCTGGATTTGGAAATAGATTAATACAGTAGTTAG  1050

seq1  CCTAAAA  1040
      |||||||
seq2  CCTAAAA  1057