BAC Information

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BAC

Clone NameB6Ng01-307O23
Chromosome10 (Build37)
Map Location 127,567,433 - 127,740,491
singlet/doubletdoublet
Overlap geneRbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52
Upstream geneLOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085
Downstream geneTmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307O23.bB6Ng01-307O23.g
ACCGA100570GA100571
length1,0901,089
definitionB6Ng01-307O23.b B6Ng01-307O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,567,433 - 127,568,522)(127,739,398 - 127,740,491)
sequence
gaattcaggtctagaaatggctgggtgagtttgggtctaccacctactca
actgtattgctcttggcgacaaaatgggaggtgcccacttgaccggaagg
gccagggacaaaaacaaactagtccttccgaaaccctcagcaaataacgc
ttcacttccaccccattttttattattgagcacttgccctttccaaagcc
gttttgcttcacaagcttggtccctatcattgttcccacatattcctaag
taatagcaggacctgtctccaaaagtccagtccatctacagtctgaccca
atgagatgggataggcctggagcctagtgaagagtcacacgaggtcaggt
gtgagctctagtccactctgattgattggaagcaaaaccacaatgtacta
aaatgagtacaggtgagatatagagtgcagagccatctatctggcctcca
tgcaaacaggactcaggagactgttaggagccttgggcaggatgatggag
aggaggcttacaactcatccctcatggcttgcatactacttcctgtcttc
agtcgctacctttctgagtaatgagctaatgaggaaaagagtggatggaa
atcactaagcagaaattacacagtgagtgccattaaccactataaaaaca
aaattacaggttgccctcatttcccatgctcacacctgttcaaccagaaa
cactagaaccctaaccagtatactcaaaagaaaaacctaaaaaggtaatt
tcaaattttaaaactgtcagttattcaaattgctttagaactacagaaaa
aggaacaatttttaataggcagtgaaggagcagcagtggcagcaagactg
tcagcagggtttccacaggacagagctctgagtctgtcactgagtgctag
agggctagaggtcgatactgggtatgaccttcctgatgttggaagcacca
atgagaaactggtcattttgtactttatgctgtccattgtctcagccctt
tcctcagtctagaacgccacagcagcacaagtcaggccaggattcccaaa
ttctgttagtgtgcacagctgctgagccagttctcaccat
gaattcaaacgagtagggggtagagaaagcgccgtcagctccgcgggaaa
ttccagtttccctactactcccccgcctctagctcaacctaacccaagca
agacggacggtggattggcagccatcgcttccaatcagcgggggccacgg
gctcatcccagccaatcagaaaaagccaggtacaggcagcgcctgagaag
gagagtgacgtagcctccgccaaaacaaggttacggaatgccaccgggga
caaactgaatcaggcgcggatctatttggtgttacgaaaagtaatccctt
cgctctcaggctttgttaagcaaaattaactttagactttgaagccaagc
ttttacgctccctgaataagaactagactaaaggggcgccagaggctaag
cactgggactcgcccggtgggtattcccagcgtggccttcatcattcccg
gcgtatagaccttcatcttgctgtgcctgtgagccattccaatacctctg
accctgtacccccgaaactcactggcatttcctatgacttctagatgtgg
ggaagaaaaaggaagcgggagcctgacttctagtgtggcccaagtggcca
ccttttctctatttctagaggcatccatctgaaattcccatcaatgtttg
tgtcgtccccagaggtcccctaattttcccaagaaacaagtctcctagac
tgtcaaaattcccctagaccgtggagctggacattgaccccaagagagag
ataaacagtaaactgagtcaactgagctgtagctattctgaggggttctt
gattaatctccaactaagagatcctactgcctctccctctcctgtgagag
tgtgtcaccgtgtctaaaatatttggggggtactggctgtgtactaaact
gctttggaattggtccaggctgtgagatgtctaggttgccaaactcagct
ctgtcatctctgttttaaggccctgtgccactagtgtcatacctacaata
cctgcattattaaagcagagcaggaatcccttacaaattcgaggtcagtc
taggctacataagaatagtagaccagctttggctatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127567433_127568522
seq2: B6Ng01-307O23.b_46_1135

seq1  GAATTCAGGTCTAGAAATGGCTGGGTGAGTTTGGGTCTACCACCTACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTAGAAATGGCTGGGTGAGTTTGGGTCTACCACCTACTCA  50

seq1  ACTGTATTGCTCTTGGCGACAAAATGGGAGGTGCCCACTTGACCGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATTGCTCTTGGCGACAAAATGGGAGGTGCCCACTTGACCGGAAGG  100

seq1  GCCAGGGACAAAAACAAACTAGTCCTTCCGAAACCCTCAGCAAATAACGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGACAAAAACAAACTAGTCCTTCCGAAACCCTCAGCAAATAACGC  150

seq1  TTCACTTCCACCCCATTTTTTATTATTGAGCACTTGCCCTTTCCAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCCACCCCATTTTTTATTATTGAGCACTTGCCCTTTCCAAAGCC  200

seq1  GTTTTGCTTCACAAGCTTGGTCCCTATCATTGTTCCCACATATTCCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTTCACAAGCTTGGTCCCTATCATTGTTCCCACATATTCCTAAG  250

seq1  TAATAGCAGGACCTGTCTCCAAAAGTCCAGTCCATCTACAGTCTGACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAGGACCTGTCTCCAAAAGTCCAGTCCATCTACAGTCTGACCCA  300

seq1  ATGAGATGGGATAGGCCTGGAGCCTAGTGAAGAGTCACACGAGGTCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATGGGATAGGCCTGGAGCCTAGTGAAGAGTCACACGAGGTCAGGT  350

seq1  GTGAGCTCTAGTCCACTCTGATTGATTGGAAGCAAAACCACAATGTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCTAGTCCACTCTGATTGATTGGAAGCAAAACCACAATGTACTA  400

seq1  AAATGAGTACAGGTGAGATATAGAGTGCAGAGCCATCTATCTGGCCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTACAGGTGAGATATAGAGTGCAGAGCCATCTATCTGGCCTCCA  450

seq1  TGCAAACAGGACTCAGGAGACTGTTAGGAGCCTTGGGCAGGATGATGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAGGACTCAGGAGACTGTTAGGAGCCTTGGGCAGGATGATGGAG  500

seq1  AGGAGGCTTACAACTCATCCCTCATGGCTTGCATACTACTTCCTGTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTTACAACTCATCCCTCATGGCTTGCATACTACTTCCTGTCTTC  550

seq1  AGTCGCTACCTTTCTGAGTAATGAGCTAATGAGGAAAAGAGTGGATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGCTACCTTTCTGAGTAATGAGCTAATGAGGAAAAGAGTGGATGGAA  600

seq1  ATCACTAAGCAGAAATTACACAGTGAGTGCCATTAACCACTATAAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAAGCAGAAATTACACAGTGAGTGCCATTAACCACTATAAAAACA  650

seq1  AAATTACAGGTTGCCCTCATTTCCCATGCTCACACCTGTTCAACCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAGGTTGCCCTCATTTCCCATGCTCACACCTGTTCAACCAGAAA  700

seq1  CACTAGAACCCTAACCAGTATACTCAAAAGAAAAACCTAAAAAGGTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAACCCTAACCAGTATACTCAAAAGAAAAACCTAAAAAGGTAATT  750

seq1  TCAAATTTTAAAACTGTCAGTTATTCAAATTGCTTTAGAACTACAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTAAAACTGTCAGTTATTCAAATTGCTTTAGAACTACAGAAAA  800

seq1  AGGAACAATTTTTAATAGGCAGTGAAGGAGCAGCAGTGGCAGCAAGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAATTTTTAATAGGCAGTGAAGGAGCAGCAGTGGCAGCAAGACTG  850

seq1  TCAGCAGGGTTTCCACAGGACAGAGCTCTGAGTCTGTCACTGAGTGCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGGTTTCCACAGGACAGAGCTCTGAGTCTGTCACTGAGTGCTAG  900

seq1  AGGGCTAGAGGTCGATAACTGGGTATGACCTTCCTGATGTTGGAAGCACC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGGCTAGAGGTCGAT-ACTGGGTATGACCTTCCTGATGTTGGAAGCACC  949

seq1  AATGAGAAAACTGGTCATTTTGTACTTTATGCTGTCCATTGTCCTCAGCC  1000
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  AATGAG-AAACTGGTCATTTTGTACTTTATGCTGTCCATTGT-CTCAGCC  997

seq1  CCTTCCTCAGTCTAGAACG-CACAGCAGCAC-AGTCAGGCCAGGATTCCC  1048
      | ||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CTTTCCTCAGTCTAGAACGCCACAGCAGCACAAGTCAGGCCAGGATTCCC  1047

seq1  -AATTCTG-TAGTGTGCACAGCTGCTGAGCCAGTTTCTCACCAT  1090
       ||||||| |||||||||||||||||||||||| ||||||||||
seq2  AAATTCTGTTAGTGTGCACAGCTGCTGAGCCAG-TTCTCACCAT  1090

seq1: chr10_127739398_127740491
seq2: B6Ng01-307O23.g_65_1153 (reverse)

seq1  GCCATAG-CAAGCCTGGTCCTTACTAT--CTATGTAGCCTAGGCTGGCCT  47
      ||||||| |||  ||||||  ||||||   |||||||||||| ||| |||
seq2  GCCATAGCCAAAGCTGGTC--TACTATTCTTATGTAGCCTAGACTGACCT  48

seq1  CGAATTTGTAAGGGATTCCTGCCTCTGCTTTAATAATGCAGGTATTGTAG  97
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CGAATTTGTAAGGGATTCCTG-CTCTGCTTTAATAATGCAGGTATTGTAG  97

seq1  GTATGGACCACTAGTGGCACAGGGCCTTTAAAAACAGAGATGACAGAGCT  147
      |||||   ||||||||||||||||||||  ||||||||||||||||||||
seq2  GTATG--ACACTAGTGGCACAGGGCCTT--AAAACAGAGATGACAGAGCT  143

seq1  GAGTTTGGGCAACCTAAGACATCTCACAGCCTGGACCAATTCCAAAGCAG  197
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  GAGTTT-GGCAACCT-AGACATCTCACAGCCTGGACCAATTCCAAAGCAG  191

seq1  TTTAGTACACAGCCAGTA-CCCCCAAATATTTTAGACACGGTGACACACT  246
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTAGTACACAGCCAGTACCCCCCAAATATTTTAGACACGGTGACACACT  241

seq1  CTCACAGGAGAGGGAGAGGCAGTAGGATCTCTTAGTTGGAGATTAATCAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGAGAGGGAGAGGCAGTAGGATCTCTTAGTTGGAGATTAATCAA  291

seq1  GAACCCCTCAGAATAGCTACAGCTCAGTTGACTCAGTTTACTGTTTATCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCTCAGAATAGCTACAGCTCAGTTGACTCAGTTTACTGTTTATCT  341

seq1  CTCTCTTGGGGTCAATGTCCAGCTCCACGGTCTAGGGGAATTTTGACAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGGGGTCAATGTCCAGCTCCACGGTCTAGGGGAATTTTGACAGT  391

seq1  CTAGGAGACTTGTTTCTTGGGAAAATTAGGGGACCTCTGGGGACGACACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGACTTGTTTCTTGGGAAAATTAGGGGACCTCTGGGGACGACACA  441

seq1  AACATTGATGGGAATTTCAGATGGATGCCTCTAGAAATAGAGAAAAGGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGATGGGAATTTCAGATGGATGCCTCTAGAAATAGAGAAAAGGTG  491

seq1  GCCACTTGGGCCACACTAGAAGTCAGGCTCCCGCTTCCTTTTTCTTCCCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTGGGCCACACTAGAAGTCAGGCTCCCGCTTCCTTTTTCTTCCCC  541

seq1  ACATCTAGAAGTCATAGGAAATGCCAGTGAGTTTCGGGGGTACAGGGTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGAAGTCATAGGAAATGCCAGTGAGTTTCGGGGGTACAGGGTCA  591

seq1  GAGGTATTGGAATGGCTCACAGGCACAGCAAGATGAAGGTCTATACGCCG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATTGGAATGGCTCACAGGCACAGCAAGATGAAGGTCTATACGCCG  641

seq1  GGAATGATGAAGGCCACGCTGGGAATACCCACCGGGCGAGTCCCAGTGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATGAAGGCCACGCTGGGAATACCCACCGGGCGAGTCCCAGTGCT  691

seq1  TAGCCTCTGGCGCCCCTTTAGTCTAGTTCTTATTCAGGGAGCGTAAAAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTGGCGCCCCTTTAGTCTAGTTCTTATTCAGGGAGCGTAAAAGC  741

seq1  TTGGCTTCAAAGTCTAAAGTTAATTTTGCTTAACAAAGCCTGAGAGCGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTCAAAGTCTAAAGTTAATTTTGCTTAACAAAGCCTGAGAGCGAA  791

seq1  GGGATTACTTTTCGTAACACCAAATAGATCCGCGCCTGATTCAGTTTGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTACTTTTCGTAACACCAAATAGATCCGCGCCTGATTCAGTTTGTC  841

seq1  CCCGGTGGCATTCCGTAACCTTGTTTTGGCGGAGGCTACGTCACTCTCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGTGGCATTCCGTAACCTTGTTTTGGCGGAGGCTACGTCACTCTCCT  891

seq1  TCTCAGGCGCTGCCTGTACCTGGCTTTTTCTGATTGGCTGGGATGAGCCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCGCTGCCTGTACCTGGCTTTTTCTGATTGGCTGGGATGAGCCC  941

seq1  GTGGCCCCCGCTGATTGGAAGCGATGGCTGCCAATCCACCGTCCGTCTTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCCCGCTGATTGGAAGCGATGGCTGCCAATCCACCGTCCGTCTTG  991

seq1  CTTGGGTTAGGTTGAGCTAGAGGCGGGGGAGTAGTAGGGAAACTGGAATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTAGGTTGAGCTAGAGGCGGGGGAGTAGTAGGGAAACTGGAATT  1041

seq1  TCCCGCGGAGCTGACGGCGCTTTCTCTACCCCCTACTCGTTTGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCGGAGCTGACGGCGCTTTCTCTACCCCCTACTCGTTTGAATTC  1089