BAC Information

Click to search

BAC

Clone NameB6Ng01-308A23
Chromosome10 (Build37)
Map Location 99,104,270 - 99,105,443
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502
Downstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308A23.bB6Ng01-308A23.g
ACCGA100660GA100661
length9161,182
definitionB6Ng01-308A23.b B6Ng01-308A23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaacgggtgttggattttg
tcacatgctttctcagcatctaatgagatgatcatatgttttttttcccc
ttgagtttgtttatatagtggattatgttgatggatttttgtatatacaa
ccatcccagcatccctaggacaaagcctacttgatcatggtggatgatca
tttttatgtgttcttggattcggttttcgagtatttttgaatcgatattc
ataagggaaattggtctgaagttctctttctttgttggatctttgtgcgg
tttacgtatcagagtaattgtggcttcatagaatgaattgagtagagtac
cttctgtttctgtttttcagaatagtttgaggagtactggtattaggtct
tctttgaaggtttgatagaactctgcataaaacccatttggtcctgggct
ttatttggttgggggactagtaatgacagtttatattactttagggacta
cgagactgtttagatcattaacctgatcctgatttaactttggtacctgg
tatctgtctagaaagttgtccatttcatccaggttatccaggtttgttga
gtaaggcttttgtagtaagatctgatgattttttggatttcctcagtttc
tgtcgttatatctcccttttaatttctgattttgttaattaggatactgt
ttctatgccctctagttagtctggttaagggtttatctatcttgttgatt
ttctcaaagaacctgctcctggtttggttgattctttgtacagttctttt
tgtttccacttggttgattttcagccctgattctgattatttcctgctgt
ctactgcccttggatgaatttgctctctttgttctagagctttcaggtgt
gctgtcatgcctgcta
gaattctttaaccaagctattctcaagttcttactctttttgtttcccac
actggttaaaactcgtcctttcacaaaaaaacccaaattctaaattctat
caaaggaatttggtctaattatcttacccggcaccttcgcaaccaaagaa
aattaaatcgaagaaaaagacctggatctgacacaaaatatccagagaac
cttgagtaattaatttccttctcctcttcctggcctcattatcctcagtg
atacatggaaactaaggaccagaaaagccgactgcactgcagttctgtgg
ggtgcaggctctaacttcgaacggagaacgcgccctttgaccactagtcg
tccttcttgtgcagaagatgagaatgcttcctctggcgctgcaaagcaga
cggaagtgttttcagttggctggtacccagaagagaaaactcgccccatt
cactatgctgaccttcgtttgcttattatctttgtattttcccagagagg
tccatatacatagatctgcattacaaagaggatgacatttttaaaataag
ctaacttctctgtagtatggttagccattaattctttcctttgtaggaag
tgttcattaaactccaggtgaaggggtttaagtcccagaaggtagtgatc
aaacgaacataagtgaataataagtggattttgtttgtttgctttaaaaa
aaagtgtttcaaaaatggtgtccgtgcttgcaaccacatatactcaccct
tctgggtgcaagaacaggagagaactacaaaggcaacaaactagaagctt
ccttgtaggcatacctacctgtgaggctagggactcaggtttttatttat
atggttgcagacatcaacatcttaaactgcattctgaaataaaggaatgg
aagacacactcaatgaagggcagaacctgacgcccattttcagcagttag
aaactctcaactatcaggaagaaaaagtgcttgcatcatcttttatgatg
cagtttccaatcaaatttattgcatgagggtgtgtgctctctagagctac
tgcttgaagcggcaaaatattcttgacaggtcacatttattcacttaact
tcggaaattgccagccatgaacgctaatttaagttatcaaggtagccctc
ttgatgccacattttcctgtaatggtgtgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99104270_99105443
seq2: B6Ng01-308A23.g_67_1247

seq1  GAATTCTTTAACCAAGCTATTCTCAAGTTCTTACTCTTTTTGTTTCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAACCAAGCTATTCTCAAGTTCTTACTCTTTTTGTTTCCCAC  50

seq1  ACTGGTTAAAACTCGTCCTTTCACAAAAAAACCCAAATTCTAAATTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAAAACTCGTCCTTTCACAAAAAAACCCAAATTCTAAATTCTAT  100

seq1  CAAAGGAATTTGGTCTAATTATCTTACCCGGCACCTTCGCAACCAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAATTTGGTCTAATTATCTTACCCGGCACCTTCGCAACCAAAGAA  150

seq1  AATTAAATCGAAGAAAAAGACCTGGATCTGACACAAAATATCCAGAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCGAAGAAAAAGACCTGGATCTGACACAAAATATCCAGAGAAC  200

seq1  CTTGAGTAATTAATTTCCTTCTCCTCTTCCTGGCCTCATTATCCTCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTAATTAATTTCCTTCTCCTCTTCCTGGCCTCATTATCCTCAGTG  250

seq1  ATACATGGAAACTAAGGACCAGAAAAGCCGACTGCACTGCAGTTCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGAAACTAAGGACCAGAAAAGCCGACTGCACTGCAGTTCTGTGG  300

seq1  GGTGCAGGCTCTAACTTCGAACGGAGAACGCGCCCTTTGACCACTAGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGGCTCTAACTTCGAACGGAGAACGCGCCCTTTGACCACTAGTCG  350

seq1  TCCTTCTTGTGCAGAAGATGAGAATGCTTCCTCTGGCGCTGCAAAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTGTGCAGAAGATGAGAATGCTTCCTCTGGCGCTGCAAAGCAGA  400

seq1  CGGAAGTGTTTTCAGTTGGCTGGTACCCAGAAGAGAAAACTCGCCCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGTGTTTTCAGTTGGCTGGTACCCAGAAGAGAAAACTCGCCCCATT  450

seq1  CACTATGCTGACCTTCGTTTGCTTATTATCTTTGTATTTTCCCAGAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGCTGACCTTCGTTTGCTTATTATCTTTGTATTTTCCCAGAGAGG  500

seq1  TCCATATACATAGATCTGCATTACAAAGAGGATGACATTTTTAAAATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACATAGATCTGCATTACAAAGAGGATGACATTTTTAAAATAAG  550

seq1  CTAACTTCTCTGTAGTATGGTTAGCCATTAATTCTTTCCTTTGTAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTCTCTGTAGTATGGTTAGCCATTAATTCTTTCCTTTGTAGGAAG  600

seq1  TGTTCATTAAACTCCAGGTGAAGGGGTTTAAGTCCCAGAAGGTAGTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTAAACTCCAGGTGAAGGGGTTTAAGTCCCAGAAGGTAGTGATC  650

seq1  AAACGAACATAAGTGAATAATAAGTGGATTTTGTTTGTTTGCTTTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAACATAAGTGAATAATAAGTGGATTTTGTTTGTTTGCTTTAAAAA  700

seq1  AAAGTGTTTCAAAAATGGTGTCCGTGCTTGCAACCACATATACTCACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTCAAAAATGGTGTCCGTGCTTGCAACCACATATACTCACCCT  750

seq1  TCTGGGTGCAAGAACAGGAGAGAACTACAAAGGCAACAAACTAGAAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGCAAGAACAGGAGAGAACTACAAAGGCAACAAACTAGAAGCTT  800

seq1  CCTTGTAGGCATACCTACCTGTGAGGCTAGGGACTCAGGTTTTTATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAGGCATACCTACCTGTGAGGCTAGGGACTCAGGTTTTTATTTAT  850

seq1  ATGGTTGCAGACATCAACATCTTAAACTGCATTCTGAAATAAAGGAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGCAGACATCAACATCTTAAACTGCATTCTGAAATAAAGGAATGG  900

seq1  AAGACACACTCAATGAAGGGCAGAACCTGACGCCCATTTTCAGGCAGTTA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGACACACTCAATGAAGGGCAGAACCTGACGCCCATTTTCA-GCAGTTA  949

seq1  GAAACTCTCAACTATCAGGAAGAAAAAAGTGGCTTGCATCATCTTTTATG  1000
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  GAAACTCTCAACTATCAGGAAG-AAAAAGT-GCTTGCATCATCTTTTATG  997

seq1  ATGCAGTTTCCAATCAAATTTATTGCATGAGGGTGTGTGCTCTCTAGAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTTCCAATCAAATTTATTGCATGAGGGTGTGTGCTCTCTAGAGC  1047

seq1  TACTGGTTGAAAGCGGGAAAATAT--CTGACAGTTAATTATTA-TCACTT  1097
      ||||| ||| |||||| |||||||   |||||| | |   ||| |||| |
seq2  TACTGCTTG-AAGCGGCAAAATATTCTTGACAGGTCACATTTATTCAC-T  1095

seq1  TAACTTTGGGAAT--GCAGCAATGAAGGTGAATTTAAGTTATCAA-GTAG  1144
      |||||| || |||   |||| ||||| |  ||||||||||||||| ||||
seq2  TAACTTCGGAAATTGCCAGCCATGAACGCTAATTTAAGTTATCAAGGTAG  1145

seq1  CCCTTTTGATGCCATATTT--CTGTA----TGTGTA  1174
      |||| ||||||||| ||||  |||||    ||||||
seq2  CCCTCTTGATGCCACATTTTCCTGTAATGGTGTGTA  1181