BAC Information

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BAC

Clone NameB6Ng01-309E10
Chromosome10 (Build37)
Map Location 103,485,456 - 103,486,579
singlet/doubletsinglet
Overlap genenone
Upstream geneCart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309E10.bB6Ng01-309E10.g
ACCGA101558GA101559
length1,1721,145
definitionB6Ng01-309E10.b B6Ng01-309E10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaagtaaaataaagtaactctccagggatactcatgtatctg
tctctgtctctttaggacctgggatgtcaatgatgtgctaacatgtatgt
aagcttctgatccaatccttcagcatctagtgaagacatggcctcatttt
cacacatttgtttaaaatcagacagacacacacatatacatatatatgat
aacaatttgttaacattgaacattttgttattaaaaatcacaccaggatg
caggttatttagcaaatatacattctgagttctatagaatacttagtagc
tgcttactgctcagtagacacacttagaaaatattgcttcatttgcattt
taagcagcgaaatcaccgagaacacataaaatataataaatgttgcactg
aatacctatgaatataatgctcacttgtgctatgggatgtgtatgaagaa
gacatagttattccatgtcaggaaatgtttcaggcatcttaaaatttctt
tatacttctcaaatatgttaacaacaatgaaagtgacatgaatatttcta
gctgcaggaaagtaaaatttaaatatgtaatccatgagtaaattgaatat
attgcatttaccatgaagttctatttctaatggatagttctaccggaatc
caaagggacttgtttccatttttaagtcttcatatattctgattataaaa
aataagtcatataaataatgtgaaatttcttgatgcaaaatatgttcccc
caccatcactatgagcgtaggtataaatttggaaaagggattcagactga
tttccattctttagaaacacacctccttgaggaaatttgatctctcagta
gaattctctacattatgaaaaaccatgctagcaacaacagcagaaggaca
tttttaatttttattttccttcttaagaaattcatagtcttttaaaaata
agttatggatattctacaggtctacctaattaaatgtctccttgtagctt
tttattaaatctgcatgtgggaaagcttttctccaggaatattggtgtac
acatagcttcttagtgctcctttcatcacggagagttagagatgtggttg
aggaattgcagtacatatgaccagaatattctgaatgaatccaataggtc
cacattcttagagggacatatt

gaattctcacctgaggaatacccaatggctgagaagaacctgaaaaaatg
ctcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcactccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcattctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaacacctctcctggac
acatatccagaagatgtcccaaccggtaagaaggacacatgctccactag
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgcatacaaaaaatgtggtacatttacacatgg
agtactactcagctattaaaaagaatgaatttatgaaaattctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcaaatgatacgtactcactgataagtggatattagcccagacact
tagtatacccgagatataagatacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagcgtggacacttttccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagagatccatcccataatta
ggctccacacgatgacaccactgcatacacttttcagcaagattttgctg
aaaggaccttgatatagctgtctcttgtgagactaggccggggccctagc
aaaaacgtaagtagatgctcacagtcagctattggatggagcacagggcc
cctaatgagagctagagaaagtatccaaagagctaagagatctgcacctg
tatgtgcaacaacattatgactacagtacctagagctctgactctagctg
catatgtatccaaagatgctagtcggccatcactgaaagagagtcccatt
gaacttgcactttatgccaatacggatggccagggccaaaaatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103485456_103486579
seq2: B6Ng01-309E10.b_94_1215

seq1  TCTCTGTCTCTTTAGGACCTGGGATGTCAATGATGTGCTAACATGTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTTTAGGACCTGGGATGTCAATGATGTGCTAACATGTATGT  50

seq1  AAGCTTCTGATCCAATCCTTCAGCATCTAGTGAAGACATGGCCTCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTGATCCAATCCTTCAGCATCTAGTGAAGACATGGCCTCATTTT  100

seq1  CACACATTTGTTTAAAATCAGACAGACACACACATATACATATATATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTTGTTTAAAATCAGACAGACACACACATATACATATATATGAT  150

seq1  AACAATTTGTTAACATTGAACATTTTGTTATTAAAAATCACACCAGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTGTTAACATTGAACATTTTGTTATTAAAAATCACACCAGGATG  200

seq1  CAGGTTATTTAGCAAATATACATTCTGAGTTCTATAGAATACTTAGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTATTTAGCAAATATACATTCTGAGTTCTATAGAATACTTAGTAGC  250

seq1  TGCTTACTGCTCAGTAGACACACTTAGAAAATATTGCTTCATTTGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACTGCTCAGTAGACACACTTAGAAAATATTGCTTCATTTGCATTT  300

seq1  TAAGCAGCGAAATCACCGAGAACACATAAAATATAATAAATGTTGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCGAAATCACCGAGAACACATAAAATATAATAAATGTTGCACTG  350

seq1  AATACCTATGAATATAATGCTCACTTGTGCTATGGGATGTGTATGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTATGAATATAATGCTCACTTGTGCTATGGGATGTGTATGAAGAA  400

seq1  GACATAGTTATTCCATGTCAGGAAATGTTTCAGGCATCTTAAAATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTTATTCCATGTCAGGAAATGTTTCAGGCATCTTAAAATTTCTT  450

seq1  TATACTTCTCAAATATGTTAACAACAATGAAAGTGACATGAATATTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCTCAAATATGTTAACAACAATGAAAGTGACATGAATATTTCTA  500

seq1  GCTGCAGGAAAGTAAAATTTAAATATGTAATCCATGAGTAAATTGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGAAAGTAAAATTTAAATATGTAATCCATGAGTAAATTGAATAT  550

seq1  ATTGCATTTACCATGAAGTTCTATTTCTAATGGATAGTTCTACCGGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATTTACCATGAAGTTCTATTTCTAATGGATAGTTCTACCGGAATC  600

seq1  CAAAGGGACTTGTTTCCATTTTTAAGTCTTCATATATTCTGATTATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGACTTGTTTCCATTTTTAAGTCTTCATATATTCTGATTATAAAA  650

seq1  AATAAGTCATATAAATAATGTGAAATTTCTTGATGCAAAATATGTTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTCATATAAATAATGTGAAATTTCTTGATGCAAAATATGTTCCCC  700

seq1  CACCATCACTATGAGCGTAGGTATAAATTTGGAAAAGGGATTCAGACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACTATGAGCGTAGGTATAAATTTGGAAAAGGGATTCAGACTGA  750

seq1  TTTCCATTCTTTAGAAACACACCTCCTTGAGGAAATTTGATCTCTCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTCTTTAGAAACACACCTCCTTGAGGAAATTTGATCTCTCAGTA  800

seq1  GAATTCTCTACATTATGAAAAACCATGCTAGCAACAACAGCAGAAGGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACATTATGAAAAACCATGCTAGCAACAACAGCAGAAGGACA  850

seq1  TTTTTAATTTTTATTTTCCTTCTTAAGAAATTCATAGTCTTTTAAAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTTTATTTTCCTTCTTAAGAAATTCATAGTCTTTTAAAAATA  900

seq1  AGTTATGGATATTCTACAGGTCTACCTAATTAAATGTCTCCTTGTAGC-T  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTTATGGATATTCTACAGGTCTACCTAATTAAATGTCTCCTTGTAGCTT  950

seq1  TTTATTAAATCTGCATGTGGGAAAGCTTTTCTCCAAGGAATATTGGTGTA  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTATTAAATCTGCATGTGGGAAAGCTTTTCTCC-AGGAATATTGGTGTA  999

seq1  CACAATAGC-TCTTAGTGGCTCCTTCAATCACGGAAGGAG-TAGAGATGT  1047
      ||| ||||| ||||||| |||||||  ||||||||  ||| |||||||||
seq2  CAC-ATAGCTTCTTAGT-GCTCCTTTCATCACGGA--GAGTTAGAGATGT  1045

seq1  GGTTGAGGA--TGCAGTAACATAAGGACAAGATATCCTGGAATG-ATACA  1094
      |||||||||  |||||| ||||| |  ||  |||| || ||||| || ||
seq2  GGTTGAGGAATTGCAGT-ACATATGACCAGAATATTCT-GAATGAATCCA  1093

seq1  ATAAAGGTCCACATTCCTAGA-GGACATATT  1124
      ||  |||||||||||| |||| |||||||||
seq2  AT--AGGTCCACATTCTTAGAGGGACATATT  1122


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