BAC Information

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BAC

Clone NameB6Ng01-310G06
Chromosome10 (Build37)
Map Location 26,202,321 - 26,203,502
singlet/doubletsinglet
Overlap genenone
Upstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
Downstream geneLOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310G06.bB6Ng01-310G06.g
ACCGA102379GA102380
length1,2191,179
definitionB6Ng01-310G06.b B6Ng01-310G06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccatctcacataggtgtgagtatgcctagttgtaggatgcta
tagaaactcagcaaagagttacctggcatctaaattttttaaattttata
aataaaaagcatggtttaaatagtgtgcacaggcatataattttcccctt
ttatgttttttaagaagatatttttttaaagtttcacaatatcttgtcct
tgagaattagaaggaatcccagtaatatgggtaacattaaattgttgaca
aaatatttcgaatgcttgactgtaatagccatttccattatctgctttaa
tctgatttggaacatcaagcataaaaaaataatgtaggcaattactactt
acatttttagttacttctcttgttaaagcagtagcaaccagaatggctaa
aaatgtctcaatattcacatgtacatattttatttttctaaaatcataaa
tatgagtaccatccatttgcaataattgattaagtataagtcctcaagaa
ttaacaacattatgtggtacaggtagaacttaaggacactttataatttg
acatgtgcattctctaaaaataccaaattgttatctcaagccattactat
tttgacaatgtaaagaatgagattatatggccatttgttcttgtgtaagg
cctttaatctgcctgggatacaaatctgctatggcattgccttaaggggt
attgttcaggcagtccagaatgagtttttatatgttcaaagacagtcctt
taaaggaacagtactttctcttaatttgagttctatattcataaacaatt
gcaaaatttgagatttagcagtatctaaaaaaagaacaatttcaagcaat
tgtgtgtgtgtgtgtgcatgtatatgtatatatactctcagtatacaaat
ttaaagcttgattttagcattttaaaaacatgactacagcacatggttca
attatttgtgctgtagagggaaactcaggagaataaacatgtgatctaat
cacatatacttcttgtcccataagaagggctgttttataaattatagttg
atattattcttttatggatgcatacataaatttacaggaaataaaagcat
gcatagagccaaattttaacacttggttttgggacaattgattatcattt
tggctacagtggcctatgccatatgcaaatattcagaattctgtaaataa
aacaagtttaatttgccgt
gaattcctagacataggtgctttgagactgtcacatgctacccccaacca
gcaccagccctgagatgctgaagtctttcccagtttctatcatcttgttt
cttgggtaagcaggttaaatctttttgttttgttttcgagacagggtttc
tctgtgtagccctggctgtcttggaactcactttgtagaccaggctggcc
tcaaactcagaaatccacctgcctctacctcccgagtgctgggattaaag
gcgtgcgtcaccaccgcctgtctagcaggttaaatcttaagcagcttaag
agataagcattctaagtgaaaactactaacgcaaattttcaaattatttt
ttaaagattttattgattaatgttgactttacctaaggtgggcagattaa
attttctaagaatctacagcctgtaaacattctagattccttgtagtagt
aagagaaaatggctgcatatttgaataaaattttattgctaagacaattc
tgcaagaattatctaaatcatatgaaatgtttcagtaaacactttttgtg
ggaactgctcaatgttgatttaatcaataaaaacaggtttaaagcaaact
tccaagttgcaagtttacgtagtttattaaaaacgtaaggaaactaatgt
ttaggagaagcccagtctgttgtcaacacaagagaaaaacacataatcag
ctgcagaaaaaaacatcatgtttgctaagacatggtgaacaaaaggctta
ataccaagttgtattttgggaagttctccatgcacaccacaatttaccta
ttaggttcaaggactgatggttattacgttgttggaacaaaacagaaaaa
ggcctttctcgggaataacaatcctattgtaggaagccagtagcttgggc
aatagacagttctcttgaaccagatgttaaattttgaggaaagtaaataa
gcccttacacacctgtgtacgatgtcatatccatttcccacccatgtata
gcgatatatatatatataaattataagtaaatttcatatttctattgcaa
gtataaaagccagagtgcagtcaatttatggtatagtccgagctcttgtt
gtcactcttaatcagaaaccttatatatagccaggtggaggggtgagcta
tttaagcctcaagattctctaggagagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26202321_26203502
seq2: B6Ng01-310G06.g_65_1243

seq1  GAATTCCTAGACATAGGTGCTTTGAGACTGTCACATGCTACCCCCAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGACATAGGTGCTTTGAGACTGTCACATGCTACCCCCAACCA  50

seq1  GCACCAGCCCTGAGATGCTGAAGTCTTTCCCAGTTTCTATCATCTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGCCCTGAGATGCTGAAGTCTTTCCCAGTTTCTATCATCTTGTTT  100

seq1  CTTGGGTAAGCAGGTTAAATCTTTTTGTTTTGTTTTCGAGACAGGGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTAAGCAGGTTAAATCTTTTTGTTTTGTTTTCGAGACAGGGTTTC  150

seq1  TCTGTGTAGCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCC  200

seq1  TCAAACTCAGAAATCCACCTGCCTCTACCTCCCGAGTGCTGGGATTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAGAAATCCACCTGCCTCTACCTCCCGAGTGCTGGGATTAAAG  250

seq1  GCGTGCGTCACCACCGCCTGTCTAGCAGGTTAAATCTTAAGCAGCTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGTCACCACCGCCTGTCTAGCAGGTTAAATCTTAAGCAGCTTAAG  300

seq1  AGATAAGCATTCTAAGTGAAAACTACTAACGCAAATTTTCAAATTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGCATTCTAAGTGAAAACTACTAACGCAAATTTTCAAATTATTTT  350

seq1  TTAAAGATTTTATTGATTAATGTTGACTTTACCTAAGGTGGGCAGATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTTTATTGATTAATGTTGACTTTACCTAAGGTGGGCAGATTAA  400

seq1  ATTTTCTAAGAATCTACAGCCTGTAAACATTCTAGATTCCTTGTAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAGAATCTACAGCCTGTAAACATTCTAGATTCCTTGTAGTAGT  450

seq1  AAGAGAAAATGGCTGCATATTTGAATAAAATTTTATTGCTAAGACAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAATGGCTGCATATTTGAATAAAATTTTATTGCTAAGACAATTC  500

seq1  TGCAAGAATTATCTAAATCATATGAAATGTTTCAGTAAACACTTTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAATTATCTAAATCATATGAAATGTTTCAGTAAACACTTTTTGTG  550

seq1  GGAACTGCTCAATGTTGATTTAATCAATAAAAACAGGTTTAAAGCAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGCTCAATGTTGATTTAATCAATAAAAACAGGTTTAAAGCAAACT  600

seq1  TCCAAGTTGCAAGTTTACGTAGTTTATTAAAAACGTAAGGAAACTAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTTGCAAGTTTACGTAGTTTATTAAAAACGTAAGGAAACTAATGT  650

seq1  TTAGGAGAAGCCCAGTCTGTTGTCAACACAAGAGAAAAACACATAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAAGCCCAGTCTGTTGTCAACACAAGAGAAAAACACATAATCAG  700

seq1  CTGCAGAAAAAAACATCATGTTTGCTAAGACATGGTGAACAAAAGGCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAAAAAAACATCATGTTTGCTAAGACATGGTGAACAAAAGGCTTA  750

seq1  ATACCAAGTTGTATTTTGGGAAGTTCTCCATGCACACCACAATTTACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGTTGTATTTTGGGAAGTTCTCCATGCACACCACAATTTACCTA  800

seq1  TTAGGTTCAAGGACTGATGGTTATTACGTTGTTGGAACAAAACAGAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTCAAGGACTGATGGTTATTACGTTGTTGGAACAAAACAGAAAAA  850

seq1  GGCCTTTCTCGGGAATAAACAATCCTATTGTAGGAAGCCAGTAGCTT-GG  899
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  GGCCTTTCTCGGGAAT-AACAATCCTATTGTAGGAAGCCAGTAGCTTGGG  899

seq1  CAATAGACAGTTCTCTTGAACCAGATGTTAAATTTTGAGGAAAGTAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGACAGTTCTCTTGAACCAGATGTTAAATTTTGAGGAAAGTAAATA  949

seq1  AG-CCTTACACACCTGTGTACGATGTCATATCCA-TTCCCACCCATGTAT  997
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCCTTACACACCTGTGTACGATGTCATATCCATTTCCCACCCATGTAT  999

seq1  AGGCGATATATATTATAATTATAAATTATAAGTAAATTTCCATATTTTCT  1047
      | |||||||||| ||||  |||||||||||||||||||| |||| |||||
seq2  A-GCGATATATA-TATA--TATAAATTATAAGTAAATTT-CATA-TTTCT  1043

seq1  ATTGCAAAGTTATTAAAAGCCAGAAGTGCCAGTCAAATTTATGGTATAGT  1097
      ||||| ||||   |||||||||| |||| ||||| |||||||||||||||
seq2  ATTGC-AAGT--ATAAAAGCCAG-AGTG-CAGTC-AATTTATGGTATAGT  1087

seq1  CACAGAGGCTCTGGTTTGTCACTC-TAATTAGAGACACTTATA-ATAGC-  1144
      |  |   ||||| | ||||||||| |||| ||| || |||||| ||||| 
seq2  CCGA---GCTCTTG-TTGTCACTCTTAATCAGAAAC-CTTATATATAGCC  1132

seq1  -AGTTGAGGGGTGAGCTATTTA--GCTC-AGATTCT-----AGAGTG  1182
        || |||||||||||||||||   ||| |||||||     ||||||
seq2  AGGTGGAGGGGTGAGCTATTTAAGCCTCAAGATTCTCTAGGAGAGTG  1179