BAC Information

Click to search

BAC

Clone NameB6Ng01-310L07
Chromosome10 (Build37)
Map Location 23,892,995 - 23,894,089
singlet/doubletsinglet
Overlap geneStx7
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
Downstream geneMoxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310L07.bB6Ng01-310L07.g
ACCGA102613GA102614
length1,1751,102
definitionB6Ng01-310L07.b B6Ng01-310L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgttccccatttttaatagggttatttggttc
tctggaatctaccttcttgagttctttgtatatattggataataaccctc
tatcagatgtaggattggtaaaggttttttcccaatctactggtttccgt
tttgtgttactgacagtgtcctttgccttacagaagctttgcaattttat
gaggtcccatttgtccattggtgatcttagagcatgagccattgatgttc
tgttcaggaaaatttcccctgtgcccatgtactcatggatcttccccaac
tttttcttctattagtttcagtgtctctggttttatgtgaaggtccttga
tccacttggacttgagctttgtacaaggagataagaatgtgttgatctga
attcttctatatgttgacttccagttgaaccagcactatttgttggaaat
gctgtattttttcattggatagttttagctctgttatcaaaaatcaagtg
accataggtgcaagttcgaattttgatgggattatattgaatctgtagat
tgctttcagcaagatggccataaggttcatttctgggtcttcaattcttt
tccattaatctacctcctgtctctgtactaataccatacagttgtatcac
tattgctctgtaatacagcttgaggtcaagaatggtgattcccccaagtt
cttttattgttgagaatagtttttgctatccttctttttttttttttttt
tgttattccagatgaatttgcaaattgctatttctaactctatgaagaat
tgagttggaattttgatggggattgcattgaatctgtagattgctttcag
caagatggctgtttttactatattatttctttgccagtccacgagcatga
agatctttccatcttcagagatcttcttcaatttctttcttcagagactt
gaagttctgtcatacagatctttcacttacttggtagaatcaccaccaaa
gcatttttatattatttgtgactattgtgaggtgtgtttccctattcttc
tcagctgtaatctttgagttgagaagcctactgatgttcattaagtatat
tcagccacttgctgagttgttatagctaggatctgcgattgcattggaat
gccatctgtagctatgaggtcacca
gaattcttcttaaacatgagtcacaacagtttataaggatattcttactg
tttactcgtaagagaaaaaaacaaactgcttgcttctgtttgcccatttg
atggcttacactgtccccagttcaagccacttcccgctaagttaatgaca
actgggaattaggtggtttctgtgtgagagactgtcaggcagctgtggct
ggagcagtgctgtaaatgcagagtaagcagcaggaagtggaatcgagttt
ccaagcctggctgactcagtgcccttgctggcgtcctttcctggtaggca
ctgacttgcttgtcctctgggagtgaagcctgagtcggagcactagcatc
gcaccagggtctcaccagtcgttttatctctgacacactgccactctgtt
attgcagattcagtgacagaaaatttttctgctaaaagatggtagcgaat
tcttcctttggctgtttgggaagttaattgaaggtgctttatgtgggcta
gggccggttctgtgctccccaacggcctgatgcactcacttgtcaaacat
ttgcaagaattccacagtccctgagctgcaactctatataggccccatcc
agtgtacctgcaatcctatgactaaaaagtacatacactattcatgcccc
agtccactagagggcagcatacacacacttacttagcaggaaaagactgc
aaaaactaactttttgatggaagagaaagccctttggggtggatgtgttg
aaaatactgtcatatttttgttaaaaattatatttcataaatccccatcc
ctgaagttaatgatgcaacagtaaaagttggccaatgatagcgaaagcag
cttatgtatttcattctcatagaagtcttgacttacgctttcctctgtgt
agtaaattagaaatttctagaatttcttttgaaagttgaaaagtatttag
ttaatatttatgcatcatgttttctttagttgaagttcttccaggttgga
aataggaatatgactgtcctgtggagcttcagacacctttccagacttat
aacttgaattgagccaggcagggatggggcagaattatcaaagaggtgac
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23892995_23894089
seq2: B6Ng01-310L07.g_68_1169

seq1  GAATTCTTCTTAAACATGAGTCACAACAGTTTATAAGGATATTCTTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTAAACATGAGTCACAACAGTTTATAAGGATATTCTTACTG  50

seq1  TTTACTCGTAAGAGAAAAAAACAAACTGCTTGCTTCTGTTTGCCCATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCGTAAGAGAAAAAAACAAACTGCTTGCTTCTGTTTGCCCATTTG  100

seq1  ATGGCTTACACTGTCCCCAGTTCAAGCCACTTCCCGCTAAGTTAATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTACACTGTCCCCAGTTCAAGCCACTTCCCGCTAAGTTAATGACA  150

seq1  ACTGGGAATTAGGTGGTTTCTGTGTGAGAGACTGTCAGGCAGCTGTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAATTAGGTGGTTTCTGTGTGAGAGACTGTCAGGCAGCTGTGGCT  200

seq1  GGAGCAGTGCTGTAAATGCAGAGTAAGCAGCAGGAAGTGGAATCGAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTGCTGTAAATGCAGAGTAAGCAGCAGGAAGTGGAATCGAGTTT  250

seq1  CCAAGCCTGGCTGACTCAGTGCCCTTGCTGGCGTCCTTTCCTGGTAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCTGGCTGACTCAGTGCCCTTGCTGGCGTCCTTTCCTGGTAGGCA  300

seq1  CTGACTTGCTTGTCCTCTGGGAGTGAAGCCTGAGTCGGAGCACTAGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGCTTGTCCTCTGGGAGTGAAGCCTGAGTCGGAGCACTAGCATC  350

seq1  GCACCAGGGTCTCACCAGTCGTTTTATCTCTGACACACTGCCACTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGGGTCTCACCAGTCGTTTTATCTCTGACACACTGCCACTCTGTT  400

seq1  ATTGCAGATTCAGTGACAGAAAATTTTTCTGCTAAAAGATGGTAGCGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGATTCAGTGACAGAAAATTTTTCTGCTAAAAGATGGTAGCGAAT  450

seq1  TCTTCCTTTGGCTGTTTGGGAAGTTAATTGAAGGTGCTTTATGTGGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTGGCTGTTTGGGAAGTTAATTGAAGGTGCTTTATGTGGGCTA  500

seq1  GGGCCGGTTCTGTGCTCCCCAACGGCCTGATGCACTCACTTGTCAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGGTTCTGTGCTCCCCAACGGCCTGATGCACTCACTTGTCAAACAT  550

seq1  TTGCAAGAATTCCACAGTCCCTGAGCTGCAACTCTATATAGGCCCCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGAATTCCACAGTCCCTGAGCTGCAACTCTATATAGGCCCCATCC  600

seq1  AGTGTACCTGCAATCCTATGACTAAAAAGTACATACACTATTCATGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACCTGCAATCCTATGACTAAAAAGTACATACACTATTCATGCCCC  650

seq1  AGTCCACTAGAGGGCAGCATACACACACTTACTTAGCAGGAAAAGACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACTAGAGGGCAGCATACACACACTTACTTAGCAGGAAAAGACTGC  700

seq1  AAAAACTAACTTTTTGATGGAAGAGAAAGCCCTTTGGGGTGGATGTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTAACTTTTTGATGGAAGAGAAAGCCCTTTGGGGTGGATGTGTTG  750

seq1  AAAATACTGTCATATTTTTGTTAAAAATTATATTTCATAAATCCCCATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTGTCATATTTTTGTTAAAAATTATATTTCATAAATCCCCATCC  800

seq1  CTGAAGTTAATGATGCAACAGTAAAAGTTGGCCAATGATAGCGAAAGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTAATGATGCAACAGTAAAAGTTGGCCAATGATAGCGAAAGCAG  850

seq1  CTTATGTATTTCATTCTCATAGAAGTCTTGACTTACGCTTTCCTCTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTATTTCATTCTCATAGAAGTCTTGACTTACGCTTTCCTCTGTGT  900

seq1  AGTAAATTAGAAATTTCTAGAATTCCTTTTGAAAGTTGAAAAGTA-TTAG  949
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  AGTAAATTAGAAATTTCTAGAATTTCTTTTGAAAGTTGAAAAGTATTTAG  950

seq1  TTAATATTTATGCATCATGTTTTTCTTTAGTTGAAGTTCTTCCAG--TTG  997
      ||||||||||||||||||| |||||||||||||||||||||||||  | |
seq2  TTAATATTTATGCATCATG-TTTTCTTTAGTTGAAGTTCTTCCAGGTTGG  999

seq1  AAATA-GAATATGACTGTCCTGT-GAGC-TCAGAACACC-TTCCAGACTA  1043
      ||||| ||||||||||||||||| |||| |||| ||||| ||||||||| 
seq2  AAATAGGAATATGACTGTCCTGTGGAGCTTCAG-ACACCTTTCCAGACTT  1048

seq1  TAAACTGAAATGGAGCCCAGCAGGGATGGGGCAG-ATTATCAAAGA-GTG  1091
        ||||  ||| |||||  ||||||||||||||| ||||||||||| |||
seq2  ATAACTTGAATTGAGCCAGGCAGGGATGGGGCAGAATTATCAAAGAGGTG  1098

seq1  ACTG  1095
      ||||
seq2  ACTG  1102