BAC Information

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BAC

Clone NameB6Ng01-310M16
Chromosome10 (Build37)
Map Location 32,855,632 - 32,856,771
singlet/doubletsinglet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310M16.bB6Ng01-310M16.g
ACCGA102673GA102674
length7781,150
definitionB6Ng01-310M16.b B6Ng01-310M16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataaaattcttaggcaaatgaatggaactagaaaatatcatcca
gagtgtggtaacccaatcacaaaaggacacacatggtacacactcactga
taagtggatattagcccaaaagctcagattgcccaaaatacaattcacag
accacatgaaggtcaagaagaaggaagaacaaagtatggatactttgttc
agtccttcttagaagtggggaacaaaatatcgatgagaagagatacagag
acaaagggtggaacacagactgaaggaaaggccatctagacactgcccta
cctcaggatatatcccatatacagttaccaaacccagacactattgtgga
tgccaagaagtacttactgacaggagcccggtacagctgtatcctgagag
gctctgccagagcctgacaaatacagaggtgaatgctcacagccaaccat
tggactaagcacggggtccccaataaaggagttagagaaagaactgaagg
agttgaaggtgtttgcaaccccacaggaagaacaacaatatcaaccaatc
agaccttccagaccaccaaccaaggaatacacatggagggaaccatggct
ccagctgcatacatagcataggatggtcttatgggacttcagtgtgggga
gaggccctttgtcctatgaaggcttgatgttccagtgtagaggaatgcca
gaatggggaagtgggacaggttgggtagatgggaaaacaccttcatagaa
gcagagggagggggataggatagtgggg

gaattcaactagaaaacaacaaataaatgaaaagtactcagaaggtgatc
ttccgttttccacaaagcacacaaaactgtacctttcattttccattcac
atttgctactgaagttgcccaaagccaagagacagaaaattgagagggca
taaaattgccttccttgacaagataaatgcaaggaacagagtgcgtaatc
tgagactacattatgttttagaagcactttaaacatgacaggatcaggtt
attgatattctggaaagaatgaggggtaaatgttactggacagtttgaca
caggctttgcttcttgaaacgttgctcttcagaactggaccagagacatc
aggcatacttttaaattctattcattttgattattttgattgctatatag
aatcatgtacaaaagaagcggggatctgactgcacagccatgcagctctg
cattgttaaagtagaaaaaggagcagctgtacaatgcttctaaagatggc
ttcacaatcaaaccatgcagggcagtaaaatcagaagcctcaggcagaaa
ttacttaacctcactatcccttattgatcactcaaaaacactgccaacta
tactagcccacttttattcctgtgaagaaccaatatgaggctggacaaga
atctccagggagacaagcctagattacagattgatatcagtaaaacaaca
cattttatctaataagtattatgagttttgcatttcagcatgggatgtag
tttgtgaaatacattgtatttcaacatttggagagcagtggagagagatg
gttgtttataccatcagcatcatatgtgtactacacacacacacacacac
acacacacaaatgaattttctatgaggtttcttaaaaagatgtttgtgca
agtacaaagttgaaaaggttacaaatatctgtcttttaacaatgtaattg
gtatttgtagaatgtctatgtatcatatagagagtcaggatgaatttatg
cttttcctgttagttatataaaagctaaaagatattaccagaaaaatata
taaagccacccaataggtgacctttgttaaatagtcataaatattcttat
cattattatggagagaaattttctgacccaatcaaaatcatgtaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32855632_32856771
seq2: B6Ng01-310M16.g_67_1216 (reverse)

seq1  AAAAATTACATGATTTCTGA-TGGGTCAG-AAATTTCT---CAT-ATATT  44
      |||||||||||||||| ||| |||||||| ||||||||   ||| ||| |
seq2  AAAAATTACATGATTT-TGATTGGGTCAGAAAATTTCTCTCCATAATAAT  49

seq1  GATAAGAATA--TATGACTATTTTAACAAAGGTCA-CTATTGGTTGCTTT  91
      ||||||||||  |||||||| |||||||||||||| ||||||| ||  ||
seq2  GATAAGAATATTTATGACTA-TTTAACAAAGGTCACCTATTGGGTGGCTT  98

seq1  TATATA-TTTTCTGTTAATATCTTTTAGCTTTTATAT-ACTTACA-GAAA  138
      |||||| ||||||| |||||||||||||||||||||| ||| ||| ||||
seq2  TATATATTTTTCTGGTAATATCTTTTAGCTTTTATATAACTAACAGGAAA  148

seq1  AGCATAAATTCATCCTGACTCTCTATATGATACATAGACATTCTACAAAT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAATTCATCCTGACTCTCTATATGATACATAGACATTCTACAAAT  198

seq1  ACCAATTACATTGTTAAAAGACAGATATTTGTAACCTTTTCAACTTTGTA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTACATTGTTAAAAGACAGATATTTGTAACCTTTTCAACTTTGTA  248

seq1  CTTGCACAAACATCTTTTTAAGAAACCTCATAGAAAATTCATTTGTGTGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACAAACATCTTTTTAAGAAACCTCATAGAAAATTCATTTGTGTGT  298

seq1  GTGTGTGTGTGTGTGTGTGTAGTACACATATGATGCTGATGGTATAAACA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTAGTACACATATGATGCTGATGGTATAAACA  348

seq1  ACCATCTCTCTCCACTGCTCTCCAAATGTTGAAATACAATGTATTTCACA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCTCTCCACTGCTCTCCAAATGTTGAAATACAATGTATTTCACA  398

seq1  AACTACATCCCATGCTGAAATGCAAAACTCATAATACTTATTAGATAAAA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACATCCCATGCTGAAATGCAAAACTCATAATACTTATTAGATAAAA  448

seq1  TGTGTTGTTTTACTGATATCAATCTGTAATCTAGGCTTGTCTCCCTGGAG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTTTTACTGATATCAATCTGTAATCTAGGCTTGTCTCCCTGGAG  498

seq1  ATTCTTGTCCAGCCTCATATTGGTTCTTCACAGGAATAAAAGTGGGCTAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTCCAGCCTCATATTGGTTCTTCACAGGAATAAAAGTGGGCTAG  548

seq1  TATAGTTGGCAGTGTTTTTGAGTGATCAATAAGGGATAGTGAGGTTAAGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTGGCAGTGTTTTTGAGTGATCAATAAGGGATAGTGAGGTTAAGT  598

seq1  AATTTCTGCCTGAGGCTTCTGATTTTACTGCCCTGCATGGTTTGATTGTG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGCCTGAGGCTTCTGATTTTACTGCCCTGCATGGTTTGATTGTG  648

seq1  AAGCCATCTTTAGAAGCATTGTACAGCTGCTCCTTTTTCTACTTTAACAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATCTTTAGAAGCATTGTACAGCTGCTCCTTTTTCTACTTTAACAA  698

seq1  TGCAGAGCTGCATGGCTGTGCAGTCAGATCCCCGCTTCTTTTGTACATGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTGCATGGCTGTGCAGTCAGATCCCCGCTTCTTTTGTACATGA  748

seq1  TTCTATATAGCAATCAAAATAATCAAAATGAATAGAATTTAAAAGTATGC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATAGCAATCAAAATAATCAAAATGAATAGAATTTAAAAGTATGC  798

seq1  CTGATGTCTCTGGTCCAGTTCTGAAGAGCAACGTTTCAAGAAGCAAAGCC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTCTCTGGTCCAGTTCTGAAGAGCAACGTTTCAAGAAGCAAAGCC  848

seq1  TGTGTCAAACTGTCCAGTAACATTTACCCCTCATTCTTTCCAGAATATCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAACTGTCCAGTAACATTTACCCCTCATTCTTTCCAGAATATCA  898

seq1  ATAACCTGATCCTGTCATGTTTAAAGTGCTTCTAAAACATAATGTAGTCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGATCCTGTCATGTTTAAAGTGCTTCTAAAACATAATGTAGTCT  948

seq1  CAGATTACGCACTCTGTTCCTTGCATTTATCTTGTCAAGGAAGGCAATTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTACGCACTCTGTTCCTTGCATTTATCTTGTCAAGGAAGGCAATTT  998

seq1  TATGCCCTCTCAATTTTCTGTCTCTTGGCTTTGGGCAACTTCAGTAGCAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCTCTCAATTTTCTGTCTCTTGGCTTTGGGCAACTTCAGTAGCAA  1048

seq1  ATGTGAATGGAAAATGAAAGGTACAGTTTTGTGTGCTTTGTGGAAAACGG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATGGAAAATGAAAGGTACAGTTTTGTGTGCTTTGTGGAAAACGG  1098

seq1  AAGATCACCTTCTGAGTACTTTTCATTTATTTGTTGTTTTCTAGTTGAAT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACCTTCTGAGTACTTTTCATTTATTTGTTGTTTTCTAGTTGAAT  1148

seq1  TC  1140
      ||
seq2  TC  1150


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