BAC Information

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BAC

Clone NameB6Ng01-310N16
Chromosome10 (Build37)
Map Location 81,400,379 - 81,400,572
singlet/doubletsinglet
Overlap geneEG666542
Upstream geneGng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127
Downstream geneEG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310N16.bB6Ng01-310N16.g
ACCGA102721GA102722
length873954
definitionB6Ng01-310N16.b B6Ng01-310N16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtttctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataattatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgacgatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattcttttttttttt
tccattttttattaggtatttagctcatttacatttccaatgctatacca
aaagtcccccttacccacccacccccactcccctacccacccactccccc
cctttggccctggcgttcccctgtaccggggcacacaaagtctgcatgta
caatgggcctctctttccagtgatggccgactaggccatcttttgataca
tatgcagctagagtcaagagctcaggggtactggttagttcaataatgtt
gttccacctataggggttgaagatccctttagcatccttgggtactttct
ctagctcctcattgggaagccct
gaattccatataaaaccagatacactaaaatttatagtggagaaagtggg
gaagagcctcaaagatatttccacaggggatcctgaacaaaatacccatg
gcttgtgttgtaagatcaagaatcaattgcaaagcctctgtaaggcaaag
gacactgtcaataagccaaaaacaaaaaacaaacaaacaaacaaacaaca
acaacaacaaaaaaaacaactgattgggaaaaaatctttaccaatcctaa
atcatataggggactaatatccaatatatatagaattcaagaagttggac
tccagaaaattaaataaccctattaaaaatggggtacagagctaaacaaa
gaattctcaaatgatgaataccgaatggctgagaaacaccaaaaaaaaaa
aaaaaatgttcagcatccttaatcatcaggaaaatgcaaatcaaaacaac
cctgagattccatttcactccagtcagaatggctaagatcaaaaattcag
gtgacagcagatgttggcaaggatgtggagaaagagaaacactcctccat
tgctggtgggattgcaagctggtacaaccactctggaaatcagtctggtg
tttcctcagaaatctggccatattactacctgaagatccagcaataccac
tcttgggtatatacccagaaggtgctccaacttgtaataaggacacatgc
tccactatgttcatagtagccttatttataatagtcagaagctggaaaga
acccagatgtccctcaacagacgagtggatacagaaaatgcggtacgttt
gcacaatggagtactactcagctattaaaacaatgaatttatggaattct
tagacaaattgatgtatctggaggatatcatcctgagtgaggtaacccaa
ccacaaagaacacacatgatattcactcactgataagtgatattagccca
gaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81400379_81400572
seq2: B6Ng01-310N16.b_708_904 (reverse)

seq1  GGAGCTAGAGAAAGTACCCAAGGA-GCTAAAGGGATCTGCAA-CCCTATA  48
      |||||||||||||||||||||||| ||||||||||||| ||| |||||||
seq2  GGAGCTAGAGAAAGTACCCAAGGATGCTAAAGGGATCTTCAACCCCTATA  50

seq1  GGTGGAACAACATTA-TGAACTAACCAGTACCCCGGAGCTCTTGACTCTA  97
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  GGTGGAACAACATTATTGAACTAACCAGTACCCCTGAGCTCTTGACTCTA  100

seq1  GCTGCATATGTTTCAAAAGATGGCCTAGTCGGCCATCACTGGGAAGAGAG  147
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAG  150

seq1  GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCC  194
      |||||||| || |||| ||||| | |||||| |||||||||||||||
seq2  GCCCATTGTACATGCAGACTTTGTGTGCCCCGGTACAGGGGAACGCC  197