BAC Information

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BAC

Clone NameB6Ng01-310P14
Chromosome10 (Build37)
Map Location 91,995,525 - 92,057,506
singlet/doubletdoublet
Overlap geneLOC216229, LOC100041814
Upstream geneLOC100041799, LOC667203
Downstream geneNedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310P14.bB6Ng01-310P14.g
ACCGA102809GA102810
length1,077822
definitionB6Ng01-310P14.b B6Ng01-310P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,995,525 - 91,996,601)(92,056,644 - 92,057,506)
sequence
gaattcagcattagtatttcttacactatgctttaaatcaacagacgtgg
acagtcaagtgttacagacacagaatcgagctctcaggaaatacataatc
acgccatagagaagatgtcatcctaggagaacatgacttcaaacatgaca
gcagcagagttctgacgctattgcctgagaatatgctggaattcctttga
attatacttgattcacaaagctagacttcggccaaaccaattatgccata
aaagcaagataactaaacagtgttaacgaaggcaataaagtgttgacaca
atgaataaagtcacaccaactgatgcatggtaaaatgagggcctgtctct
atgaaatgaaaaaacatcaagttaccctttatagtaacaagatgtattta
tctgtttcatgttatatattttggatatattccagaactggaaaacgcca
tccacttttaaaacgacaatccaaaaagccacacttgtcgctgatttcaa
tgtgcaggaagtttttatcctacaagtaaattgtgtgtggtattcctgtg
aaagtccaccaagccaagtctgatgattctagattcatgaactagcaaag
gaaagttttctcaacacgtatagagcctccctttcccaaatatcaaagat
ggttctcattccttgtattatctaagttaaaccaccacatttatcatgtc
ccaagccaaaaagtaaaataaaataaaatgaaataaaaaaaaatggaatt
taaagcagaatgaatttaagtgtgactgactttgaagagaatgccaagga
gatggggaggtggcaaggacaagttttaccacacaggaaggaaccttgca
taaaggacaatacaggagttggtgctacgagaggtcagcaatgctcacac
caggaagacagaaaaggaggagctggtggagaatggaagtgaagcagaga
gagaggagggaggcgcacttggcttctctctcccatctaggctcatgtgt
tctttaagagttgaccgtgaatctgagatgacagagcactggagatcagt
gttgagggcaactctgagagcagactg
gaattcaacgctttcttatgacctctgcagtcctgcatacacacagtaca
tagatatacatgcaggtcaaataccctattcataaaatacaaggttaaaa
tcaggggcaattaacattccctacattcttttctaagcaccaatgagaca
tacctaaaaataagtcttttcttttcttttcatttcttttcttttctttt
cttttcttttcttttcttttcttttcttttcttttcttttcttttctttt
cttttcttctcttctcttctcttctcttctcttctcttctcttctcttct
cttctcttctcttttcttttcttttcttttcttttcttttcttttctttt
tgcaatagaactccaattagcaagctcaagagttgattcctttttggtgt
atcaaaaccatacagcataaatggctgagtcatacaaacaaatgagcttt
ttctctgtttattgctgtgccagaactcagtgactacaacaatgctgagt
gaatgtactgataattcaatgagtcagtaacctgtacatcagttccccag
gaccgtgaatgcagcctccaatggctgggatcctacgatggttccatagc
agcgtgttgacctgacttgatggcttgaagccggctgctctggtaagcca
gagagcacttactcgacgtctccacttaccagcagcttcgaggcagagtg
ttagatttcatcttgagggaatagaacagtacagacgctgagagagcatt
gtcatgtcatcttgaatgtagtaagtcactgtgatgatgcagatgtgtgt
atatgtgtatatgtgtatatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91995525_91996601
seq2: B6Ng01-310P14.b_47_1123

seq1  GAATTCAGCATTAGTATTTCTTACACTATGCTTTAAATCAACAGACGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTAGTATTTCTTACACTATGCTTTAAATCAACAGACGTGG  50

seq1  ACAGTCAAGTGTTACAGACACAGAATCGAGCTCTCAGGAAATACATAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAAGTGTTACAGACACAGAATCGAGCTCTCAGGAAATACATAATC  100

seq1  ACGCCATAGAGAAGATGTCATCCTAGGAGAACATGACTTCAAACATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCATAGAGAAGATGTCATCCTAGGAGAACATGACTTCAAACATGACA  150

seq1  GCAGCAGAGTTCTGACGCTATTGCCTGAGAATATGCTGGAATTCCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGTTCTGACGCTATTGCCTGAGAATATGCTGGAATTCCTTTGA  200

seq1  ATTATACTTGATTCACAAAGCTAGACTTCGGCCAAACCAATTATGCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTTGATTCACAAAGCTAGACTTCGGCCAAACCAATTATGCCATA  250

seq1  AAAGCAAGATAACTAAACAGTGTTAACGAAGGCAATAAAGTGTTGACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGATAACTAAACAGTGTTAACGAAGGCAATAAAGTGTTGACACA  300

seq1  ATGAATAAAGTCACACCAACTGATGCATGGTAAAATGAGGGCCTGTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAAGTCACACCAACTGATGCATGGTAAAATGAGGGCCTGTCTCT  350

seq1  ATGAAATGAAAAAACATCAAGTTACCCTTTATAGTAACAAGATGTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGAAAAAACATCAAGTTACCCTTTATAGTAACAAGATGTATTTA  400

seq1  TCTGTTTCATGTTATATATTTTGGATATATTCCAGAACTGGAAAACGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCATGTTATATATTTTGGATATATTCCAGAACTGGAAAACGCCA  450

seq1  TCCACTTTTAAAACGACAATCCAAAAAGCCACACTTGTCGCTGATTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTTAAAACGACAATCCAAAAAGCCACACTTGTCGCTGATTTCAA  500

seq1  TGTGCAGGAAGTTTTTATCCTACAAGTAAATTGTGTGTGGTATTCCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGAAGTTTTTATCCTACAAGTAAATTGTGTGTGGTATTCCTGTG  550

seq1  AAAGTCCACCAAGCCAAGTCTGATGATTCTAGATTCATGAACTAGCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCACCAAGCCAAGTCTGATGATTCTAGATTCATGAACTAGCAAAG  600

seq1  GAAAGTTTTCTCAACACGTATAGAGCCTCCCTTTCCCAAATATCAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTTCTCAACACGTATAGAGCCTCCCTTTCCCAAATATCAAAGAT  650

seq1  GGTTCTCATTCCTTGTATTATCTAAGTTAAACCACCACATTTATCATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCATTCCTTGTATTATCTAAGTTAAACCACCACATTTATCATGTC  700

seq1  CCAAGCCAAAAAGTAAAATAAAATAAAATGAAATAAAAAAAAATGGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCAAAAAGTAAAATAAAATAAAATGAAATAAAAAAAAATGGAATT  750

seq1  TAAAGCAGAATGAATTTAAGTGTGACTGACTTTGAAGAGAATGCCAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGAATGAATTTAAGTGTGACTGACTTTGAAGAGAATGCCAAGGA  800

seq1  GATGGGGAGGTGGCAAGGACAAGTTTTACCACACAGGAAGGAACCTTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGAGGTGGCAAGGACAAGTTTTACCACACAGGAAGGAACCTTGCA  850

seq1  T-AAGGACAATACAGGAGTTGGTGCTACGAGAGGTCAGCAATGCTCACAC  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGACAATACAGGAGTTGGTGCTACGAGAGGTCAGCAATGCTCACAC  900

seq1  CAGGAAGACAGAAAAGGAGGAGCTGGTGGAGAAATGGAAGTGAAGCAGAG  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGGAAGACAGAAAAGGAGGAGCTGGTGGAG-AATGGAAGTGAAGCAGAG  949

seq1  AGAGAGGAGGGAGGCGCACTTGGCTTCTCTCTCCCATCTAGGCTCCATGT  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAGAGGAGGGAGGCGCACTTGGCTTCTCTCTCCCATCTAGGCT-CATGT  998

seq1  G-TCTTTAAGAGTTGACCGTGAATCTGAGATGACAGAGGCACTGGAGATC  1048
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTCTTTAAGAGTTGACCGTGAATCTGAGATGACAGA-GCACTGGAGATC  1047

seq1  AGTG-TGAGGGAAACTCTGAGAGCAGACTG  1077
      |||| |||||| ||||||||||||||||||
seq2  AGTGTTGAGGGCAACTCTGAGAGCAGACTG  1077

seq1: chr10_92056644_92057506
seq2: B6Ng01-310P14.g_70_891 (reverse)

seq1  TCATATACACATATACACATATACACACATCTGCATCATCACAGTGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCATATACACATATACACATATACACACATCTGCATCATCACAGTGACT-  49

seq1  TACTACATTTTTCCAAGATGACCATGACAATGCCTTCTTCTCCCAGCCTT  100
      |||||||||    |||||||| |||||||||||     |||| ||||   
seq2  TACTACATT----CAAGATGA-CATGACAATGC-----TCTCTCAGC--G  87

seq1  TCTGTACTGTTCCCTATTCCCCCTCAAAAAAATGAAATCTAACACTCCTG  150
      |||||||||||  |||||||| |     || ||||||||||||||| |||
seq2  TCTGTACTGTT--CTATTCCCTC-----AAGATGAAATCTAACACT-CTG  129

seq1  CCTCGAAAGCCTGCTGGTAAGTGGAGACGTCGAGTAAAGTTGCTCTTCTG  200
      |||||||   |||||||||||||||||||||||||||   ||||| ||||
seq2  CCTCGAA--GCTGCTGGTAAGTGGAGACGTCGAGTAA--GTGCTC-TCTG  174

seq1  GCTTTACCAGAGCAGCCCGGGCTTCAAGCCATCCAAGTTCAGGGGTCAAA  250
      || ||||||||||||||  ||||||||||||| |||| |||  |||| ||
seq2  GC-TTACCAGAGCAGCC--GGCTTCAAGCCAT-CAAG-TCA--GGTC-AA  216

seq1  CACGCTGCTATGGAACCATCCGTAGGATCCCAGCCATTTGGAGGCTGCAT  300
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  CACGCTGCTATGGAACCAT-CGTAGGATCCCAGCCA-TTGGAGGCTGCAT  264

seq1  TCACGGTCCTGGGGGAACTGATTGTACAGGTTACTGACTCATTGAATTTA  350
      |||||||||| |||||||||| |||||||||||||||||||||||| |||
seq2  TCACGGTCCT-GGGGAACTGA-TGTACAGGTTACTGACTCATTGAA-TTA  311

seq1  TCAGTACATTTCACTCAGCATTGTTTGTAGTCACTGAGTTCTGGCACAGC  400
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  TCAGTACA-TTCACTCAGCATTG-TTGTAGTCACTGAGTTCTGGCACAGC  359

seq1  AATAAACAGAGAAAAAGCTCATTTGTTTGTATGACTCAGCCATTTATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAGAGAAAAAGCTCATTTGTTTGTATGACTCAGCCATTTATGCT  409

seq1  GTATGGTTTTGATACACCAAAAAGGAATCAACTCTTGAGCTTGCTAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTTTTGATACACCAAAAAGGAATCAACTCTTGAGCTTGCTAATTG  459

seq1  GAGTTCTATTGCAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTATTGCAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  509

seq1  AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG  559

seq1  AAGAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  609

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAATGAAAAGAAAAGAAAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAATGAAAAGAAAAGAAAAGAC  659

seq1  TTATTTTTAGGTATGTCTCATTGGTGCTTAGAAAAGAATGTAGGGAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAGGTATGTCTCATTGGTGCTTAGAAAAGAATGTAGGGAATGT  709

seq1  TAATTGCCCCTGATTTTAACCTTGTATTTTATGAATAGGGTATTTGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCCCCTGATTTTAACCTTGTATTTTATGAATAGGGTATTTGACCT  759

seq1  GCATGTATATCTATGTACTGTGTGTATGCAGGACTGCAGAGGTCATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATATCTATGTACTGTGTGTATGCAGGACTGCAGAGGTCATAAGA  809

seq1  AAGCGTTGAATTC  863
      |||||||||||||
seq2  AAGCGTTGAATTC  822