BAC Information

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BAC

Clone NameB6Ng01-311B06
Chromosome10 (Build37)
Map Location 128,816,894 - 128,901,018
singlet/doubletdoublet
Overlap geneOlfr784, EG546488, Olfr786, Olfr787
Upstream geneAnkrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1
Downstream geneOlfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311B06.bB6Ng01-311B06.g
ACCGA102885GA102886
length1,0021,093
definitionB6Ng01-311B06.b B6Ng01-311B06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,816,894 - 128,817,851)(128,899,915 - 128,901,018)
sequence
gaattcttaaaatatttgtaataaattctttctttttcattaaacattat
tatccaaaagaaaaaaaaaaagaaatcagcattgaaactctttaaagtca
caataaatggtattagatatttaccctgctgtgagtctgccagacctgga
gttggctaaagccagacacaaagttttctgacattctgacgaatgttttc
ctgacattctagctctctaactttactgaatgtttgctgataacttctta
aaagtcctaaaagctttcttgctcattctgagagttaaaaactgctggct
taggtgattaacagtgatagcctatcagagaggattaagtaaagtagcct
atgccctttctcccacaggaagttccattgatctaactcccagtttaaca
attgaagccacaggaagacaaaggaacactttgaaaagtgattttaatct
ttttaaaaacattagtagttattttctttatttacatttcaaatgttatt
cacttcccttgtttcccctccggaaaaccctctatcccatcctccctccc
tctgcttctatgagggtgttccctcgaccatctacccactctctcttccc
catcttggcattcccctacactgaggcatccagctttcataagaccaagg
gcctgtcctcccactaatgttccacaaggccgtcttctgctacatatgaa
gctggagtccctcaatgtgtactatttggttggtggtctagtccctgaga
gctctggggtgtctggttcattcatattgtttttcctcctatggggctgc
aaaacccttcagctccttcagtcctttctcaaactcttccattggggacc
ccgtgctcagtccaatggttggctgtgagcatctacctctgtatctgtca
agctctggcagagcctctcagagacagctatgtcagacttcctatcaaca
agcacttgttggcatccataatagttgtcagggtttggtaactgtatatg
gg
gaattccacttaacttcttcagagaagagctcaagagaaatagatgtttc
agaccattttgggctaggcaccagactgttatattaaaaatgaatctaac
aacaacaaaaaaaaaaaaaacaagaaaggaataagcaaataccacaactg
taaatcattgcttgcatttagcattcacgagtctaaaagcaaccatactg
tagcatctttcagattaataatagtaaaacaagacaaaagtgctcagcag
catagatgcctgagagataaggacacatgggagaggacaataaacttcat
tttgtctttatgtcattacaatatttgttcctcttagcacgtatcctcat
ttgcttctataaagtactactttattaatcaaatccttgaaggcttgttt
tacttgttcatttctcaacgagtaaatgaaagggttcagcatgggagcaa
ttgaagtattgagaacagccacccctttggtcagtgatgccctttcattt
gcagaaggtttgacatacatgaaaatgcagctgccataagagatggagat
gacaatcatatgagaggaacaagtggagaaagcctttttcctctgactgg
cagatgggaacctcagaatggtgctgatgatggagatatatgacaagatc
actagagccagtgtgaacagcagagtaataaatgcaaagtaaaagccaat
catctctaaactccttgtatctgagcaggagagctgtagaatggggaagt
agtcacaggagaagtgatcaatgacattagaagcacagaagtccagcttg
aggaccaacattaatggtggaaagatggtcaggaatcctgccagccatga
ggcaaggacaagaagggtgcagactttctgattcatgatgagggtgtagt
gcagtggcttgcagatggcaacataacgatcgtagacatagcagttagaa
gaaagaactcagacactcccatggagatgaagaaaattataactgagccc
aacagtgttataggaaattgtcttgacttagtaatatgactcaaaatcta
ggatgcaacactgttgaatatatttctagaagggaaatctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128816894_128817851
seq2: B6Ng01-311B06.b_47_1004

seq1  GAATTCTTAAAATATTTGTAATAAATTCTTTCTTTTTCATTAAACATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAATATTTGTAATAAATTCTTTCTTTTTCATTAAACATTAT  50

seq1  TATCCAAAAGAAAAAAAAAAAGAAATCAGCATTGAAACTCTTTAAAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAAAGAAAAAAAAAAAGAAATCAGCATTGAAACTCTTTAAAGTCA  100

seq1  CAATAAATGGTATTAGATATTTACCCTGCTGTGAGTCTGCCAGACCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGGTATTAGATATTTACCCTGCTGTGAGTCTGCCAGACCTGGA  150

seq1  GTTGGCTAAAGCCAGACACAAAGTTTTCTGACATTCTGACGAATGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTAAAGCCAGACACAAAGTTTTCTGACATTCTGACGAATGTTTTC  200

seq1  CTGACATTCTAGCTCTCTAACTTTACTGAATGTTTGCTGATAACTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTCTAGCTCTCTAACTTTACTGAATGTTTGCTGATAACTTCTTA  250

seq1  AAAGTCCTAAAAGCTTTCTTGCTCATTCTGAGAGTTAAAAACTGCTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTAAAAGCTTTCTTGCTCATTCTGAGAGTTAAAAACTGCTGGCT  300

seq1  TAGGTGATTAACAGTGATAGCCTATCAGAGAGGATTAAGTAAAGTAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTAACAGTGATAGCCTATCAGAGAGGATTAAGTAAAGTAGCCT  350

seq1  ATGCCCTTTCTCCCACAGGAAGTTCCATTGATCTAACTCCCAGTTTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTTCTCCCACAGGAAGTTCCATTGATCTAACTCCCAGTTTAACA  400

seq1  ATTGAAGCCACAGGAAGACAAAGGAACACTTTGAAAAGTGATTTTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCCACAGGAAGACAAAGGAACACTTTGAAAAGTGATTTTAATCT  450

seq1  TTTTAAAAACATTAGTAGTTATTTTCTTTATTTACATTTCAAATGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAACATTAGTAGTTATTTTCTTTATTTACATTTCAAATGTTATT  500

seq1  CACTTCCCTTGTTTCCCCTCCGGAAAACCCTCTATCCCATCCTCCCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTTGTTTCCCCTCCGGAAAACCCTCTATCCCATCCTCCCTCCC  550

seq1  TCTGCTTCTATGAGGGTGTTCCCTCGACCATCTACCCACTCTCTCTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCTATGAGGGTGTTCCCTCGACCATCTACCCACTCTCTCTTCCC  600

seq1  CATCTTGGCATTCCCCTACACTGAGGCATCCAGCTTTCATAAGACCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGCATTCCCCTACACTGAGGCATCCAGCTTTCATAAGACCAAGG  650

seq1  GCCTGTCCTCCCACTAATGTTCCACAAGGCCGTCTTCTGCTACATATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCCTCCCACTAATGTTCCACAAGGCCGTCTTCTGCTACATATGAA  700

seq1  GCTGGAGTCCCTCAATGTGTACTATTTGGTTGGTGGTCTAGTCCCTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGTCCCTCAATGTGTACTATTTGGTTGGTGGTCTAGTCCCTGAGA  750

seq1  GCTCTGGGGTGTCTGGTTCATTCATATTGTTTTTCCTCCTATGGGGCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGTGTCTGGTTCATTCATATTGTTTTTCCTCCTATGGGGCTGC  800

seq1  AAAACCCTTCAGCTCCTTCAGTCCTTTCTCAAACTCTTCCATTGGGGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTTCAGCTCCTTCAGTCCTTTCTCAAACTCTTCCATTGGGGACC  850

seq1  CCGTGCTCAGTCCAATGGTTGGCTGTGAGCATCTACCTCTGTATCTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCTCAGTCCAATGGTTGGCTGTGAGCATCTACCTCTGTATCTGTCA  900

seq1  GGCTCTGGCAGAGCCTCTCAGGAGACAGCTATGTCAGAC-TCCTATCAAC  949
       ||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  AGCTCTGGCAGAGCCTCTCA-GAGACAGCTATGTCAGACTTCCTATCAAC  949

seq1  AAGCACTTG  958
      |||||||||
seq2  AAGCACTTG  958

seq1: chr10_128899915_128901018
seq2: B6Ng01-311B06.g_68_1160 (reverse)

seq1  TCCAGAATTTCTCCTTCTTAGAAATTATATTCACCAGTGTTTCCATCCCT  50
      ||||| ||||| ||||| |||||| |||||||| ||||| || ||| |||
seq2  TCCAG-ATTTC-CCTTC-TAGAAA-TATATTCAACAGTG-TTGCAT-CCT  44

seq1  AGATTTTTGGAGTCAATAATTACTAAAGTCAAGACAATTTCCTATAACAA  100
      |||||||  ||||||   |||||| ||||||||||||||||||||||| |
seq2  AGATTTT--GAGTCA--TATTACT-AAGTCAAGACAATTTCCTATAAC-A  88

seq1  CTGTTTGGCTCAGTTATA--TTTCTTCATCTCCATGGGAGTGTCTGAGTT  148
      ||||| ||||||||||||  ||||||||||||||||||||||||||||||
seq2  CTGTTGGGCTCAGTTATAATTTTCTTCATCTCCATGGGAGTGTCTGAGTT  138

seq1  CTTTCTTCTAACTGCTATGTCTTACGATCGTTATGTTGCCATCTGCAAGC  198
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTTCTTCTAACTGCTATGTC-TACGATCGTTATGTTGCCATCTGCAAGC  187

seq1  CACTGCACTACACCCTCATCATGAATCAGAAAGTCTGCACCCTTCTTGTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCACTACACCCTCATCATGAATCAGAAAGTCTGCACCCTTCTTGTC  237

seq1  CTTGCCTCATGGCTGGCAGGATTCCTGACCATCTTTCCACCATTAATGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCATGGCTGGCAGGATTCCTGACCATCTTTCCACCATTAATGTT  287

seq1  GGTCCTCAAGCTGGACTTCTGTGCTTCTAATGTCATTGATCACTTCTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCAAGCTGGACTTCTGTGCTTCTAATGTCATTGATCACTTCTCCT  337

seq1  GTGACTACTTCCCCATTCTACAGCTCTCCTGCTCAGATACAAGGAGTTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTACTTCCCCATTCTACAGCTCTCCTGCTCAGATACAAGGAGTTTA  387

seq1  GAGATGATTGGCTTTTACTTTGCATTTATTACTCTGCTGTTCACACTGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGATTGGCTTTTACTTTGCATTTATTACTCTGCTGTTCACACTGGC  437

seq1  TCTAGTGATCTTGTCATATATCTCCATCATCAGCACCATTCTGAGGTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGATCTTGTCATATATCTCCATCATCAGCACCATTCTGAGGTTCC  487

seq1  CATCTGCCAGTCAGAGGAAAAAGGCTTTCTCCACTTGTTCCTCTCATATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCCAGTCAGAGGAAAAAGGCTTTCTCCACTTGTTCCTCTCATATG  537

seq1  ATTGTCATCTCCATCTCTTATGGCAGCTGCATTTTCATGTATGTCAAACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATCTCCATCTCTTATGGCAGCTGCATTTTCATGTATGTCAAACC  587

seq1  TTCTGCAAATGAAAGGGCATCACTGACCAAAGGGGTGGCTGTTCTCAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAAATGAAAGGGCATCACTGACCAAAGGGGTGGCTGTTCTCAATA  637

seq1  CTTCAATTGCTCCCATGCTGAACCCTTTCATTTACTCGTTGAGAAATGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTGCTCCCATGCTGAACCCTTTCATTTACTCGTTGAGAAATGAA  687

seq1  CAAGTAAAACAAGCCTTCAAGGATTTGATTAATAAAGTAGTACTTTATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAACAAGCCTTCAAGGATTTGATTAATAAAGTAGTACTTTATAG  737

seq1  AAGCAAATGAGGATACGTGCTAAGAGGAACAAATATTGTAATGACATAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATGAGGATACGTGCTAAGAGGAACAAATATTGTAATGACATAAA  787

seq1  GACAAAATGAAGTTTATTGTCCTCTCCCATGTGTCCTTATCTCTCAGGCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATGAAGTTTATTGTCCTCTCCCATGTGTCCTTATCTCTCAGGCA  837

seq1  TCTATGCTGCTGAGCACTTTTGTCTTGTTTTACTATTATTAATCTGAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTGCTGAGCACTTTTGTCTTGTTTTACTATTATTAATCTGAAAG  887

seq1  ATGCTACAGTATGGTTGCTTTTAGACTCGTGAATGCTAAATGCAAGCAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACAGTATGGTTGCTTTTAGACTCGTGAATGCTAAATGCAAGCAAT  937

seq1  GATTTACAGTTGTGGTATTTGCTTATTCCTTTCTTGTTTTTTTTTTTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACAGTTGTGGTATTTGCTTATTCCTTTCTTGTTTTTTTTTTTTTT  987

seq1  GTTGTTGTTAGATTCATTTTTAATATAACAGTCTGGTGCCTAGCCCAAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTAGATTCATTTTTAATATAACAGTCTGGTGCCTAGCCCAAAA  1037

seq1  TGGTCTGAAACATCTATTTCTCTTGAGCTCTTCTCTGAAGAAGTTAAGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGAAACATCTATTTCTCTTGAGCTCTTCTCTGAAGAAGTTAAGTG  1087

seq1  GAATTC  1104
      ||||||
seq2  GAATTC  1093