BAC Information

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BAC

Clone NameB6Ng01-311N04
Chromosome10 (Build37)
Map Location 10,818,198 - 10,818,873
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039238, LOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
Downstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311N04.bB6Ng01-311N04.g
ACCGA103445GA103446
length1,1271,138
definitionB6Ng01-311N04.b B6Ng01-311N04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacattctggataaaggtattcattatatgttttaaaatttta
cttctagtctataatgtctttcattctcttaataatgacttttgagaagc
aagagtctttagttttgatgaagttaaatttactctataggttttttttt
taataattacttaaaatgtttacttaagaaacaaaattgcatagcacaca
ttgcaattggttgatgtgtctctcaagtttctacaacaccctagattcca
cttctgtcttccttcaagaatcttgtttattagttccctctccctactgt
tgggcatttcatctaaggtccctccctttgagtcctgggagtctatcacc
tcccagatctctggtgcgttttggggggtcccccccaacctcctattttc
ctgaagttgcctgtttccattctttctgctggccctcagggcttcagtcc
ttttccctcacccaatagcaggtcaggttcccctctcctccccccacttc
tccccaaccccatccactttccctcccaggtccctccttccctccccact
tgtgattgctttcttctctctcccaagtgggactgaggcatcctcacttg
gacacttcagcttgttgagctttttgagttctgtggactatatcttgtgt
attctatattattattttattttattggctaatatccactaattagtgag
tacatgccatgcatgtccttttgggtctgagttacctcactcaggatgat
attttttagttccatccatttgcctgcaaaactcaggatgtcctctttct
taatagctgagtagtattcatttgtgtaaacaaaccacatttttctgtat
ccattcttctgtcatgggacatctaaggttgttttccagcttctggctat
cacaaaataaggcccctatgaacatagtggaacacatgccccttgtggca
tgacatctttgggtatattaccaagagtggtatagctaggtcttcaaggt
agatctatttccaattttctgaggaactccaaattggattttctaaagtg
ctgtactagtttgcatcctacagcatgaggatgtttcctcttctcttaca
tccttccaacatgatgttgtgtcaaac

gaattcacagtacatttcctgggggcaaaactttacacaagattatgtca
tacaaagctgtggggtgatggctcaaagacaggtttgtgaattaatatag
tagaaccgagagggtagaggtaagtcctactccctgtacttacatgattt
ccagaaataaaacaaaagaatacatctgtctgatagaaaatactgaggta
actggacaatcttcacacaacatgaaattgaatcacctacctcacaatga
atgcaaaagtcattcagtcggagccatgacttgcattcaaggcataaaac
tataaaacaaaagagaaaacataggagcaagtctacttcgtgttggactt
cacattggattcttagaaataatgatacaaaacacatgactaataaaata
aagtagaatagggaaatttgacttgattaaagttagaaatttatgagtat
tgatacacagccacctagagaatggtagagaatattggccaatcatatgt
ttaattagtaccttttattcagaattattataagaactcataaatcaaca
ataagacaaaacagctgtcaaaaagtaggcggaactgaactaaaatccaa
aaagacatgctaatggccaaaagtacacaaaaaaatgttcaaaccaagca
gtcatggatgacacgcaaattataaactgtaaactacttcgtagcccata
aggtggtttttatccaatgagaaataacaactcttagtgtcaatgtggtg
aaatgggaattcagaattgttggcaagaatgtaaaatagtgtggccactt
tgaaaagcaatctggcaggtatccagtaagttacacacaaaattaccata
tgacccagccatttcaccactaggaaaatatccaaaagaatttaaaaata
tcagcatgaatattcatagcacagctgctcatgctcacagcagcaaattc
ccttccctttccccagcagaagaaactgaaaaacagaagaggtcaatata
ggttcttattgctaatcttaatcactaatagcagcaatagtcttaaaata
atacaaggtcagcggcagagttgatcacatgccctgagtcctagccagag
gccttagaggcctgatgacgtgttccaagaaagctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10818198_10818873
seq2: B6Ng01-311N04.g_531_1205

seq1  CCTAGAGAATGGTAGAGAATATTGGCCAATCATATGTTTAATTAGTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGAATGGTAGAGAATATTGGCCAATCATATGTTTAATTAGTACCT  50

seq1  TTTATTCAGAATTATTATAAGAACTCATAAATCAACAATAAGACAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGAATTATTATAAGAACTCATAAATCAACAATAAGACAAAACA  100

seq1  GCTGTCAAAAAGTAGGCGGAACTGAACTAAAATCCAAAAAGACATGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAAAAAGTAGGCGGAACTGAACTAAAATCCAAAAAGACATGCTAA  150

seq1  TGGCCAAAAGTACACAAAAAAATGTTCAAACCAAGCAGTCATGGATGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAAAGTACACAAAAAAATGTTCAAACCAAGCAGTCATGGATGACA  200

seq1  CGCAAATTATAAACTGTAAACTACTTCGTAGCCCATAAGGTGGTTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAATTATAAACTGTAAACTACTTCGTAGCCCATAAGGTGGTTTTTAT  250

seq1  CCAATGAGAAATAACAACTCTTAGTGTCAATGTGGTGAAATGGGAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGAAATAACAACTCTTAGTGTCAATGTGGTGAAATGGGAATTCA  300

seq1  GAATTGTTGGCAAGAATGTAAAATAGTGTGGCCACTTTGAAAAGCAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTGGCAAGAATGTAAAATAGTGTGGCCACTTTGAAAAGCAATCT  350

seq1  GGCAGGTATCCAGTAAGTTACACACAAAATTACCATATGACCCAGCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTATCCAGTAAGTTACACACAAAATTACCATATGACCCAGCCATT  400

seq1  TCACCACTAGGAAAATATCCAAAAGAA-TTAAAAATATCAGCATGAATAT  449
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCACCACTAGGAAAATATCCAAAAGAATTTAAAAATATCAGCATGAATAT  450

seq1  TCATAGCACAGCTGCTCATGCTCACAGCAGC-AATTCCCTTCCTTTCCCC  498
      ||||||||||||||||||||||||||||||| ||||||||||| || |||
seq2  TCATAGCACAGCTGCTCATGCTCACAGCAGCAAATTCCCTTCCCTTTCCC  500

seq1  CAGCAGAAGAAACTG-AAAACAGAAGAGGTCAATATAGGTTC-TATTGCT  546
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  CAGCAGAAGAAACTGAAAAACAGAAGAGGTCAATATAGGTTCTTATTGCT  550

seq1  AAATCTAATCACCTAATAGCCAGCAATAGTCTTAAAATAATACAAGGTCA  596
      ||   |||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AATCTTAATCA-CTAATAG-CAGCAATAGTCTTAAAATAATACAAGGTCA  598

seq1  GCGGCAGAAGTTGATCACATG-CCTGAGTCCTAG-CAGAAGCCCTAGGAG  644
      ||||||| ||||||||||||| |||||||||||| |||| ||| |||   
seq2  GCGGCAG-AGTTGATCACATGCCCTGAGTCCTAGCCAGAGGCCTTAG--A  645

seq1  GGGCTGATGAAGTGGGTCACAAGAAAGCTGAA  676
      || ||||||| ||  ||  |||||||||||||
seq2  GGCCTGATGACGT--GTTCCAAGAAAGCTGAA  675


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