BAC Information

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BAC

Clone NameB6Ng01-312I24
Chromosome10 (Build37)
Map Location 89,340,448 - 89,441,826
singlet/doubletdoublet
Overlap geneAnks1b, LOC100043039
Upstream geneSlc5a8, Tmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik
Downstream geneLOC544719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312I24.bB6Ng01-312I24.g
ACCGA104001GA104002
length7531,158
definitionB6Ng01-312I24.b B6Ng01-312I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,441,279 - 89,441,826)(89,340,448 - 89,341,585)
sequence
gaattctattgtagggggaaaaaatctcattttgtttattcagtcatcac
ttgcagacatttggattgtttccagggttagctataatgctagtataaac
ccttttgagcaggcgccttcatttcacttgggtagatacctaagtgtgga
attactgtgttatctagtaaccttacatttaaccttgtgagaaaatatac
aatatctttcttaaaacagtttcaaaccccattctatagtcttaccagct
acaaatgtctgagtttgtccacatctttgccaatatgttacagttccttt
gaacagctgagtgtgtatgaggtgtgtatgtagtatgtatttggtgacag
cttccttggagccttattttgcagttctccaatgatgagatggagcacat
tttcttgtgcttatcagttacttatagatcttctttagcaaaatatctat
taaaatctttgtctatttaaaaacatccgggggatggaaattccgattag
tggtacagcacctgactagaaacaacaaggatggggttctaggaccacag
gagaaggaagaaaaagggaagaggtagagaaactggtcttgaaaaacaac
tgcaaaacaaagtgattaaagctttaaccatcagtagaactggggagtgg
ctcaagagctaacatgagactgtgggccttctccactctcccgccaagcc
aagcatctccgccttccctgccccagtagaggacagctggtttatggact
aaa
gaattctattcctatggtttttgtgaggattaaatgacataaaaagtaat
aaatgaagaatattgactacataggtgttcattgttacagttagggtcct
cacatgattctaaagcacaggagacaccgtgagacttgatttatttattt
aattttattttttaaattcttcaatcctttttttttttttttcagtccag
tctttatccccctcccggtccatcctctgactgttccacatcccatactt
ccccccacccccttttccaagaggatgttccagctccccctagccctcta
ctccactccaccagacctccctactccctggagcctcaagtttctttatg
gttaggtacatcttatctcactgagtcaagacctggcagtcctctgctgt
gtatgtattgggggcctcatatcagctggtctgtgctgcctggttggtgg
ttcagtctctgaacaacgttagttgagactgctggtctttctataggttg
ctataggagacttgatttcttaaggacttatttaaactgggaggaagtct
ctcctgagctacgtgtctctacgctctcaatccgccatccaacaaacatg
gatcaggtaatgcagtttgtagagcccagccggcagtttgtaaaggactc
aattcggctggttaaaagatgcaccaaacccgacagaaaagaattccaga
agattgccatggctacagctataggatttgctatcatgggattcattggc
ttcttcgtgaaactgatccatatacccattaataacattattgtgggtgg
ctgagtccttctcatcaatgggaacgagtgagccagagcgggggaaaggg
catgaagtaaaagcgttgctctgaaaaaaaaaaaaaaaaaaaaaaaaaac
ctggggaggaaattgccaccaccacatttttacactggaattggagtctc
tcaaataagaaaggggcctttagttcaagttctaacatgggtggaggaat
ttcttttctgccaaattactctccaagccattattaacatggtagagtta
tctccagccatcactcactagtctagataactaaatccaggtacacacac
accttatttttgtgggcggaatctggttatctcccttgaaggcgaatctt
gaaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89441279_89441826
seq2: B6Ng01-312I24.b_253_800 (reverse)

seq1  TTTAGTCCATAAACCAGCTGTCCTCTACTGGGGCAGGGAAGGCGGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCCATAAACCAGCTGTCCTCTACTGGGGCAGGGAAGGCGGAGATG  50

seq1  CTTGGCTTGGCGGGAGAGTGGAGAAGGCCCACAGTCTCATGTTAGCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTGGCGGGAGAGTGGAGAAGGCCCACAGTCTCATGTTAGCTCTT  100

seq1  GAGCCACTCCCCAGTTCTACTGATGGTTAAAGCTTTAATCACTTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTCCCCAGTTCTACTGATGGTTAAAGCTTTAATCACTTTGTTTT  150

seq1  GCAGTTGTTTTTCCAGACCAGTTTCTCTACCTCTTCCCTTTTTCTTCCTT  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGTTTTTCAAGACCAGTTTCTCTACCTCTTCCCTTTTTCTTCCTT  200

seq1  CTCCTGTGGTCCTAGAACCCCATCCTTGTTGTTTCTAGTCAGGTGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGGTCCTAGAACCCCATCCTTGTTGTTTCTAGTCAGGTGCTGTA  250

seq1  CCACTAATCGGAATTTCCATCCCCCGGATGTTTTTAAATAGACAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAATCGGAATTTCCATCCCCCGGATGTTTTTAAATAGACAAAGATT  300

seq1  TTAATAGATATTTTGCTAAAGAAGATCTATAAGTAACTGATAAGCACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGATATTTTGCTAAAGAAGATCTATAAGTAACTGATAAGCACAAG  350

seq1  AAAATGTGCTCCATCTCATCATTGGAGAACTGCAAAATAAGGCTCCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGCTCCATCTCATCATTGGAGAACTGCAAAATAAGGCTCCAAGG  400

seq1  AAGCTGTCACCAAATACATACTACATACACACCTCATACACACTCAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTCACCAAATACATACTACATACACACCTCATACACACTCAGCTG  450

seq1  TTCAAAGGAACTGTAACATATTGGCAAAGATGTGGACAAACTCAGACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGAACTGTAACATATTGGCAAAGATGTGGACAAACTCAGACATT  500

seq1  TGTAGCTGGTAAGACTATAGAATGGGGTTTGAAACTGTTTTAAGAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGGTAAGACTATAGAATGGGGTTTGAAACTGTTTTAAGAAAG  548

seq1: chr10_89340448_89341585
seq2: B6Ng01-312I24.g_70_1227

seq1  GAATTCTATTCCTATGGTTTTTGTGAGGATTAAATGACATAAAAAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCCTATGGTTTTTGTGAGGATTAAATGACATAAAAAGTAAT  50

seq1  AAATGAAGAATATTGACTACATAGGTGTTCATTGTTACAGTTAGGGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAATATTGACTACATAGGTGTTCATTGTTACAGTTAGGGTCCT  100

seq1  CACATGATTCTAAAGCACAGGAGACACCGTGAGACTTGATTTATTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATTCTAAAGCACAGGAGACACCGTGAGACTTGATTTATTTATTT  150

seq1  AATTTTATTTTTTAAATTCTTCAATCCTTTTTTTTTTTTTTTCAGTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTTTTAAATTCTTCAATCCTTTTTTTTTTTTTTTCAGTCCAG  200

seq1  TCTTTATCCCCCTCCCGGTCCATCCTCTGACTGTTCCACATCCCATACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCCCCCTCCCGGTCCATCCTCTGACTGTTCCACATCCCATACTT  250

seq1  CCCCCCACCCCCTTTTCCAAGAGGATGTTCCAGCTCCCCCTAGCCCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCTTTTCCAAGAGGATGTTCCAGCTCCCCCTAGCCCTCTA  300

seq1  CTCCACTCCACCAGACCTCCCTACTCCCTGGAGCCTCAAGTTTCTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCCACCAGACCTCCCTACTCCCTGGAGCCTCAAGTTTCTTTATG  350

seq1  GTTAGGTACATCTTATCTCACTGAGTCAAGACCTGGCAGTCCTCTGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTACATCTTATCTCACTGAGTCAAGACCTGGCAGTCCTCTGCTGT  400

seq1  GTATGTATTGGGGGCCTCATATCAGCTGGTCTGTGCTGCCTGGTTGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATTGGGGGCCTCATATCAGCTGGTCTGTGCTGCCTGGTTGGTGG  450

seq1  TTCAGTCTCTGAACAACGTTAGTTGAGACTGCTGGTCTTTCTATAGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTCTGAACAACGTTAGTTGAGACTGCTGGTCTTTCTATAGGTTG  500

seq1  CTATAGGAGACTTGATTTCTTAAGGACTTATTTAAACTGGGAGGAAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGAGACTTGATTTCTTAAGGACTTATTTAAACTGGGAGGAAGTCT  550

seq1  CTCCTGAGCTACGTGTCTCTACGCTCTCAATCCGCCATCCAACAAACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGCTACGTGTCTCTACGCTCTCAATCCGCCATCCAACAAACATG  600

seq1  GATCAGGTAATGCAGTTTGTAGAGCCCAGCCGGCAGTTTGTAAAGGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGTAATGCAGTTTGTAGAGCCCAGCCGGCAGTTTGTAAAGGACTC  650

seq1  AATTCGGCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGAATTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGGCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGAATTCCAGA  700

seq1  AGATTGCCATGGCTACAGCTATAGGATTTGCTATCATGGGATTCATTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCCATGGCTACAGCTATAGGATTTGCTATCATGGGATTCATTGGC  750

seq1  TTCTTCGTGAAACTGATCCATATACCCATTAATAACATTATTGTGGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCGTGAAACTGATCCATATACCCATTAATAACATTATTGTGGGTGG  800

seq1  CTGAGTCCTTCTCATC-ATGGG-ACGAGTGAGCCAGAGCGGGGGAAAGGG  848
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  CTGAGTCCTTCTCATCAATGGGAACGAGTGAGCCAGAGCGGGGGAAAGGG  850

seq1  CATGAAGT-AAAGCGTTGC-CTGAAAAAAAAAAAAAAAAAAAAAAAAAAA  896
      |||||||| |||||||||| |||   ||||||||||||||||||||||||
seq2  CATGAAGTAAAAGCGTTGCTCTG---AAAAAAAAAAAAAAAAAAAAAAAA  897

seq1  AAACT-GGGAGGAAATTGCCA-CACCACATTTTT-CACTGGAATTGGAGT  943
      || || ||||||||||||||| |||||||||||| |||||||||||||||
seq2  AACCTGGGGAGGAAATTGCCACCACCACATTTTTACACTGGAATTGGAGT  947

seq1  C-CTCAAAT-AGAAAGGGGCCTTTAGTCCAAGTTCTTACAT-GGTGGAGG  990
      | ||||||| ||||||||||||||||| |||||||| |||| ||||||||
seq2  CTCTCAAATAAGAAAGGGGCCTTTAGTTCAAGTTCTAACATGGGTGGAGG  997

seq1  AATTTC--TTCTG-CAAATTA-TCT-CAAG-CATTATTAACATTGT-GAG  1033
      ||||||  ||||| ||||||| ||| |||| |||||||||||| || |||
seq2  AATTTCTTTTCTGCCAAATTACTCTCCAAGCCATTATTAACATGGTAGAG  1047

seq1  TTATCTCAAG-CATCACCCAC-AGTCTCAGTAACTAAACCCAGGGCACAC  1081
      ||||||| || |||||| ||| |||||   |||||||| ||| || ||||
seq2  TTATCTCCAGCCATCACTCACTAGTCTAGATAACTAAATCCA-GGTACAC  1096

seq1  ACAC-CCCTATTTTTGTGGCCGG-ATCTTGTTATCTCCCT--GAGGCCGA  1127
      |||| || ||||||||||| ||| |||| |||||||||||   ||||  |
seq2  ACACACCTTATTTTTGTGGGCGGAATCTGGTTATCTCCCTTGAAGGCGAA  1146

seq1  TCTTG-AACTCA  1138
      ||||| ||||||
seq2  TCTTGAAACTCA  1158