BAC Information

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BAC

Clone NameB6Ng01-312J08
Chromosome10 (Build37)
Map Location 25,312,175 - 25,497,027
singlet/doubletdoublet
Overlap geneEG667513
Upstream geneCtgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik
Downstream geneLOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312J08.bB6Ng01-312J08.g
ACCGA104017GA104018
length1,0621,018
definitionB6Ng01-312J08.b B6Ng01-312J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,495,994 - 25,497,027)(25,312,175 - 25,313,167)
sequence
gaattcacatgaccccagatggaatcagatacaacaatttttttaaaacc
tttttgcatcaggtctaatctttcagagaatgagcacaaaaaggcagaga
tcctcccctgacccccaccctgacacacttaacaatagtacgcgtcagag
gtatcgatctgaataaggcttcttggagaagaatgaaatctcctggtacc
tccccatgtaatacctgcatggctgctattagactaaaggctgtggcaga
agcatgggcagtaattaagcatcggcatttgcataaagataatgggagct
gaataggaaagaagcaaatcagatgcacaccgatacattcttcacagaaa
gggagaggagcgcacaaagacagcagcagaagaaataaaagcagtaatcc
gcacgtctgtgtgtttaaacactgtatttagaagcatcttatcatcatga
accacatcacctgccagctgctctcaacaggggatggcgcccactcggtc
ccctgagagttaataagcgctgtctttcgctcctagctggctctgcattt
ccaagttgtaatgttgttctaagctacatgtggtggcacatacctgaaat
ctcatcattgaagagcctgaggcaggagggttgtgactttgaagccatcc
tggactacatcatgaaacccttcataatttttttttaattaaaagaaaga
aaagaaagcatatgatgttgagaaaagtgtggggaggaaactggcactca
aatcatagaagtgtgtggggccttgtgtgtaaaaaacagtacttttcagg
gcaacataaaattgtgttgatctaaatcaaggaagaaattttcttaaatt
caaagaatgcccagggtttcccagtcatgaacttcaagagctggccatgt
tgacaggggagtgacagttggggaagacaaacatgccagaggtggtggct
tggtggccaacacagggttcttagtccctggataattccaatgttgtttg
gcctttacctaattgccagttgacaaacaatcaaaaagaaaacttggagg
attaacgggttt
gaattcctgctgtgtcacatagtaagtttgcatctgtttctgttggggtt
ggccaaacttagtgatgaccccagaataatagctgctgtccaggctacca
cttgttatgtctatgacatggtagggagggaaatgagatagatactctac
caatccaaggggaatcttgtctgaaggatctacaaatctttctaactgta
tctttgtagtgtgtagacgcatattagccctggggccatgctatataagc
aaccatagcaggagtctaggaaagcagacggaggaaatattcctaaagtc
atagtgattaagtttagagttgaggttgagaaaaatctttcgacaaggct
tagattcacaatattgccattggtaagactggaaaaaaaactttgaccac
tggaggaagagcagagactatgccagacacagtatgaaagtcctggaaga
acactgcactacactgggaaagagtacttcctgcttgtattgaaatgttc
aaattagattagaatatacacaagtgttgataatgggagggtgttctgta
ttgtggacaatgtgctactactgtgtttgtactggtggtacctgggatca
cctcactggggctcaaaccatgtgaagagggcgagtcttgattggttgtt
attagtgaggcagattcagaccctgattccttgagaggagaaaggataat
agaagttgagagcaagccacactccttgcaggccatagcacttttcagca
ggtgatgttctcttgaaacaggggtgtgcatagagctgcggctatttttt
cctgaaggtcaaggcttttgcgggtggtgaccaagaagttagatctgggg
gcactgctggacttctgtgtgaatccctattcagaggaagaggtctgtaa
gcattatttttggagctattagggtttgatagaattggggctagtctata
actgtctgacctggtatgtgtcatacatgtagatttctctccagatacac
tttggatgaagtgtttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25495994_25497027
seq2: B6Ng01-312J08.b_50_1111 (reverse)

seq1  AAACCCGTTAATCCT-CAAGTTT--CTTTTGA-TGTTTGTC-ACT-GCAA  44
      ||||||||||||||| |||||||   |||||| |||||||| ||| ||||
seq2  AAACCCGTTAATCCTCCAAGTTTTCTTTTTGATTGTTTGTCAACTGGCAA  50

seq1  T--AGTAAAGCCAACACA----TGG-ATTATC--AGGACTA--GACCCTG  83
      |   |||||| | | |||    ||| ||||||   ||||||   ||||||
seq2  TTAGGTAAAGGCCAAACAACATTGGAATTATCCAGGGACTAAGAACCCTG  100

seq1  TG-TGGCCA-CAAG-CACCA-CTCT-GCATGTTTGTCT--CCCAACTGTC  126
      || |||||| |||| ||||| |||| ||||||||||||  ||||||||||
seq2  TGTTGGCCACCAAGCCACCACCTCTGGCATGTTTGTCTTCCCCAACTGTC  150

seq1  ACTCCCCTGTC-ACATGGCCAGCTCTTGAAGTTCATGACTGGGAAA-CCT  174
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  ACTCCCCTGTCAACATGGCCAGCTCTTGAAGTTCATGACTGGGAAACCCT  200

seq1  GGGCATTCTTTGA--TTTAGGAAATTTCTTCCTTGATTTAGATCAACACA  222
      |||||||||||||  || || |||||||||||||||||||||||||||||
seq2  GGGCATTCTTTGAATTTAAGAAAATTTCTTCCTTGATTTAGATCAACACA  250

seq1  A-TTTATGTTGCCCTGAAAAGTACTGTTTTTTACACACAAGGCCCCACAC  271
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGTTGCCCTGAAAAGTACTGTTTTTTACACACAAGGCCCCACAC  300

seq1  ACTTCTATGATTTGAGTGCCAGTTTCCTCCCCACACTTTTCTCAACATCA  321
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATGATTTGAGTGCCAGTTTCCTCCCCACACTTTTCTCAACATCA  350

seq1  TATGCTTTTCTTTTCTTTCTTTTAATTAAAAAAAAATTATGAAGGGTTTC  371
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGC-TTTCTTTTCTTTCTTTTAATTAAAAAAAAATTATGAAGGGTTTC  399

seq1  ATGATGTAGTCCAGGATGGCTTCAAAGTCACAACCCTCCTGCCTCAGGCT  421
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTAGTCCAGGATGGCTTCAAAGTCACAACCCTCCTGCCTCAGGCT  449

seq1  CTTCAATGATGAGATTTCAGGTATGTGCCACCACATGTAGCTTAGAACAA  471
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATGATGAGATTTCAGGTATGTGCCACCACATGTAGCTTAGAACAA  499

seq1  CATTACAACTTGGAAATGCAGAGCCAGCTAGGAGCGAAAGACAGCGCTTA  521
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAACTTGGAAATGCAGAGCCAGCTAGGAGCGAAAGACAGCGCTTA  549

seq1  TTAACTCTCAGGGGACCGAGTGGGCGCCATCCCCTGTTGAGAGCAGCTGG  571
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCTCAGGGGACCGAGTGGGCGCCATCCCCTGTTGAGAGCAGCTGG  599

seq1  CAGGTGATGTGGTTCATGATGATAAGATGCTTCTAAATACAGTGTTTAAA  621
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATGTGGTTCATGATGATAAGATGCTTCTAAATACAGTGTTTAAA  649

seq1  CACACAGACGTGCGGATTACTGCTTTTATTTCTTCTGCTGCTGTCTTTGT  671
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACGTGCGGATTACTGCTTTTATTTCTTCTGCTGCTGTCTTTGT  699

seq1  GCGCTCCTCTCCCTTTCTGTGAAGAATGTATCGGTGTGCATCTGATTTGC  721
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCCTCTCCCTTTCTGTGAAGAATGTATCGGTGTGCATCTGATTTGC  749

seq1  TTCTTTCCTATTCAGCTCCCATTATCTTTATGCAAATGCCGATGCTTAAT  771
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTATTCAGCTCCCATTATCTTTATGCAAATGCCGATGCTTAAT  799

seq1  TACTGCCCATGCTTCTGCCACAGCCTTTAGTCTAATAGCAGCCATGCAGG  821
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCCATGCTTCTGCCACAGCCTTTAGTCTAATAGCAGCCATGCAGG  849

seq1  TATTACATGGGGAGGTACCAGGAGATTTCATTCTTCTCCAAGAAGCCTTA  871
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATGGGGAGGTACCAGGAGATTTCATTCTTCTCCAAGAAGCCTTA  899

seq1  TTCAGATCGATACCTCTGACGCGTACTATTGTTAAGTGTGTCAGGGTGGG  921
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCGATACCTCTGACGCGTACTATTGTTAAGTGTGTCAGGGTGGG  949

seq1  GGTCAGGGGAGGATCTCTGCCTTTTTGTGCTCATTCTCTGAAAGATTAGA  971
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGGGAGGATCTCTGCCTTTTTGTGCTCATTCTCTGAAAGATTAGA  999

seq1  CCTGATGCAAAAAGGTTTTAAAAAAATTGTTGTATCTGATTCCATCTGGG  1021
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGCAAAAAGGTTTTAAAAAAATTGTTGTATCTGATTCCATCTGGG  1049

seq1  GTCATGTGAATTC  1034
      |||||||||||||
seq2  GTCATGTGAATTC  1062

seq1: chr10_25312175_25313167
seq2: B6Ng01-312J08.g_70_1087

seq1  GAATTCCTGCTGTGTCACATAGTAAGTTTGCATCTGTTTCTGTTGGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTGTGTCACATAGTAAGTTTGCATCTGTTTCTGTTGGGGTT  50

seq1  GGCCAAACTTAGTGATGACCCCAGAATAATAGCTGCTGTCCAGGCTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAACTTAGTGATGACCCCAGAATAATAGCTGCTGTCCAGGCTACCA  100

seq1  CTTGTTATGTCTATGACATGGTAGGGAGGGAAATGAGATAGATACTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATGTCTATGACATGGTAGGGAGGGAAATGAGATAGATACTCTAC  150

seq1  CAATCCAAGGGGAATCTTGTCTGAAGGATCTACAAATCTTTCTAACTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAAGGGGAATCTTGTCTGAAGGATCTACAAATCTTTCTAACTGTA  200

seq1  TCTTTGTAGTGTGTAGACGCATATTAGCCCTGGGGCCATGCTATATAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTAGTGTGTAGACGCATATTAGCCCTGGGGCCATGCTATATAAGC  250

seq1  AACCATAGCAGGAGTCTAGGAAAGCAGACGGAGGAAATATTCCTAAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGCAGGAGTCTAGGAAAGCAGACGGAGGAAATATTCCTAAAGTC  300

seq1  ATAGTGATTAAGTTTAGAGTTGAGGTTGAGAAAAATCTTTCGACAAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATTAAGTTTAGAGTTGAGGTTGAGAAAAATCTTTCGACAAGGCT  350

seq1  TAGATTCACAATATTGCCATTGGTAAGACTGGAAAAAAAACTTTGACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCACAATATTGCCATTGGTAAGACTGGAAAAAAAACTTTGACCAC  400

seq1  TGGAGGAAGAGCAGAGACTATGCCAGACACAGTATGAAAGTCCTGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAGAGCAGAGACTATGCCAGACACAGTATGAAAGTCCTGGAAGA  450

seq1  ACACTGCACTACACTGGGAAAGAGTACTTCCTGCTTGTATTGAAATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACTACACTGGGAAAGAGTACTTCCTGCTTGTATTGAAATGTTC  500

seq1  AAATTAGATTAGAATATACACAAGTGTTGATAATGGGAGGGTGTTCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGATTAGAATATACACAAGTGTTGATAATGGGAGGGTGTTCTGTA  550

seq1  TTGTGGACAATGTGCTACTACTGTGTTTGTACTGGTGGTACCTGGGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGACAATGTGCTACTACTGTGTTTGTACTGGTGGTACCTGGGATCA  600

seq1  CCTCACTGGGGCTCAAACCATGTGAAGAGGGCGAGTCTTGATTGGTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGGGGCTCAAACCATGTGAAGAGGGCGAGTCTTGATTGGTTGTT  650

seq1  ATTAGTGAGGCAGATTCAGACCCTGATTCCTTGAGAGGAGAAAGGATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGAGGCAGATTCAGACCCTGATTCCTTGAGAGGAGAAAGGATAAT  700

seq1  AGAAGTTGAGAGCAAGCCACACTCCTTGCAGGCCATAGCAC-TTTCAGCA  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAAGTTGAGAGCAAGCCACACTCCTTGCAGGCCATAGCACTTTTCAGCA  750

seq1  GGTGATGTTCTC-TGAAACAGGGGTGTGCATAGAGCTGCGGCTA-TTTTT  797
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  GGTGATGTTCTCTTGAAACAGGGGTGTGCATAGAGCTGCGGCTATTTTTT  800

seq1  CCTGAA-GTCAA-GCCTTTGCGGGTGGTGACCAAG-AGTTAGATCT-GGG  843
      |||||| ||||| || ||||||||||||||||||| |||||||||| |||
seq2  CCTGAAGGTCAAGGCTTTTGCGGGTGGTGACCAAGAAGTTAGATCTGGGG  850

seq1  GCACTGCT-GAC-TCTGTGTGAATCCCTATTCAGAG--AGAGGCCTGTAA  889
      |||||||| ||| |||||||||||||||||||||||  ||||| ||||||
seq2  GCACTGCTGGACTTCTGTGTGAATCCCTATTCAGAGGAAGAGGTCTGTAA  900

seq1  GCATTA-TTTTGGAGCTA-TAGG--TTGATAGAATT-GGGCCAGCC--AG  932
      |||||| ||||||||||| ||||  ||||||||||| |||| || |    
seq2  GCATTATTTTTGGAGCTATTAGGGTTTGATAGAATTGGGGCTAGTCTATA  950

seq1  ACTG-CTGA-CTGGTAAG-GTCAAAC-TGTAGATT--CCTCCAGATTACA  976
      |||| |||| |||||| | |||| || ||||||||   ||||||| ||||
seq2  ACTGTCTGACCTGGTATGTGTCATACATGTAGATTTCTCTCCAGA-TACA  999

seq1  CTT--GAGGAAGTGTTTGG  993
      |||  || |||||||||||
seq2  CTTTGGATGAAGTGTTTGG  1018