BAC Information

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BAC

Clone NameB6Ng01-312L06
Chromosome10 (Build37)
Map Location 114,417,616 - 114,418,250
singlet/doubletsinglet
Overlap genenone
Upstream geneTrhde, 4930473D10Rik
Downstream geneTph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071, EG668073, Tspan8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312L06.bB6Ng01-312L06.g
ACCGA104107GA104108
length1,201850
definitionB6Ng01-312L06.b B6Ng01-312L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccattcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacacccctccattgttggt
gggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtagcacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccttatccagggatccacaccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
agggacccagatgtagctgtctcttgtgagactatgccggggcctagcaa
cacagaagtggatgctcacagtcagctaatggatggatcaaggggctccc
aatggaggagctagaggaaagtagccaaggagctaaagggatctgcaacc
ctataggttgaacaacattatgactaaccagtaccccggagctctggact
ctagctgcatatgtatcaaagaatgcctagtggtcaatcagtgcaagaag
aggccattggacacgctaccttttaatgcccagtacagggacgcagtcaa
tgggcaattgggtgggcttaggggtaagtcgtcgactatcccgactctag
a
gaattcacatagggcaggaacttggaggcaggagctgatgcagaggccat
ggagaggtgctgcttactggcttgcttcccctggcttactcagcctgctt
tcttttttttttttctgacaataagtttattttatttatttttttccatt
ttttattaggtatttagctcatttacatttccaatgctataccaaaagtc
ccccatacccacccacccccactcccctacccacccactccccctttttg
gccctggcgttcccctgtactggggcatataaagtttgcctgtccaatgg
gcctctctttccagtgatggccgacttggccatcttttgatacatatgca
gctagagtcaagagctccggggtactggttagttcataatgttgttccac
ctatagggttgcagatccctttagctccttgggtactttctctagctcct
ccattgggagctctgtgatccatccattagctgactgtgagcatccactt
ctgtgtttgctaggccccggcatagtctcacaagagacagctacatctgg
gtcctttcgataaaatcttgctatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgattagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgatgtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggacctgagattg
aaaggatggaccatgtagagacttgccatatccagggatccaccccaata

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_114417616_114418250
seq2: B6Ng01-312L06.g_66_700 (reverse)

seq1  TCCACTAATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTA  50

seq1  CCTCACTCAGGATAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCAGGATAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTC  100

seq1  TCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  150

seq1  GTCAGCTAATGGATGGATCACAGAGCTCCCAATGGAGGAGCTAGAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTAATGGATGGATCACAGAGCTCCCAATGGAGGAGCTAGAGAAAG  200

seq1  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTAT  250

seq1  GAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAA  300

seq1  AGATGGCCAAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCAAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAGGCAA  350

seq1  ACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTG  400

seq1  GGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGC  450

seq1  ATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAATAA  500

seq1  ATAAAATAAACTTATTGTCAGAAAAAAAAAAAAGAAAGCAGGCTGAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAACTTATTGTCAGAAAAAAAAAAAAGAAAGCAGGCTGAGTAA  550

seq1  GCCAGGGGAAGCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGAAGCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCA  600

seq1  GCTCCTGCCTCCAAGTTCCTGCCCTATGTGAATTC  635
      |||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCCTCCAAGTTCCTGCCCTATGTGAATTC  635