BAC Information

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BAC

Clone NameB6Ng01-312P19
Chromosome10 (Build37)
Map Location 16,488,914 - 16,490,072
singlet/doubletsinglet
Overlap geneLOC546472
Upstream geneLOC671439, LOC382457
Downstream geneLOC100039576, LOC627511, Cited2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312P19.bB6Ng01-312P19.g
ACCGA104319GA104320
length1,1911,153
definitionB6Ng01-312P19.b B6Ng01-312P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactagactttcaaaaaagagctaatatcaacactcttcaaagt
attattcaaaataaaatccgaaggaacattgccaaagttattttatgagg
ccatagtcacccggatacataaaacacacagactcaacaaagaaatagaa
ttttagacaattacattcccttatgaacattgacgccaaaataataaaat
actagaaaactgacctcaagaaacctataaaacatcatccaacatgatca
agtaggttttatcccagggatacagggatggttcaacataagaaaaccca
tcaatataagccacaatataaacaaactgaaagaaaaatgcataatcatg
acgttagatgcttaaatgcttaaaaaatcctttggcaaagaagctgaact
attttaaaggggaaaaagtaaagaaataatcttgaactggaagtctgcat
ataaaagaaagtaaatagatccagatttatcttcctccacaaaactcaag
tccaagtcgatcaagaccttcacaaaaatcagtatacagtaaatctaata
gaaaagaaagtgggaaacagccttgaatacattggcacatgacacaacct
tctgaacagaacaactgctcaagcattaagatcaacaattaataaatgag
atctcatgcaactgaaaagatccagtaagtcagaggacacccttaattgg
aaaaaaacaaaaaacaaaaaacagcctacataatagaaaatatctcacca
acttatatcaattagatgactaatatccacaatatagaaagaactgaagg
aattagaaaccaacaaaccatataacctaattaaaaattggagtacaaaa
ctaaacagagaattctcagcagagaaatctctaatggcacttaaagaaag
gtttagtggtcctagtcatcaggaaaatgcaaatctagacaactttgaga
ttccatcttatatcagtcaaaatggctagtccagaaactcaagcacagca
catgctagcaataatctggagcatgtgaaactcctcattgatggtaggag
tgcacatttgtacagcactctggaatcagttggacaggtttctcagaatt
tggacttatactcagctctaacctctctgcacctgtacacaacatgttta
acgtactacatgacacttagatccactcttggctatattcc
gaattctttggaaaaccaccctattttctgctccatgggcattcctgagg
tatgttatcttgactttggtgttgcagtcttctaggaggttcagtgaatt
gatggatgcagattttatctgacaagagtcaatgcttaaaccatgtcaca
gttctctcttcttttttctaaacaccatattgctctttcctttaattgat
actttgtgccccttgttatgtggttggcttctccctagaaaaaacagatt
aatgtatgctaaattttctattcaaagactgtatttaagttgagaaatcc
atttaagaatcattctttttctattattattattattattattattatta
ttattattattaatcattccattcactacatctcaaatgatatccctctt
cccggttaccccctccatcatcccccattccatgatattcctatttcctg
gttacctctccaccaccacccccaccacacaaacacacctatcccacagg
ggcagcagccacaaatggagatagatcagccaggaaggtcttcacctttt
tagcacgcgggaagatgtattcagtctcgacacacaaagccaggacccgc
ttgtaccctttgataatggaatgtcgcactcaggcaagatttgggtacgc
aatctgcagacagacgctggccatattgcgactccatatgggaagcaaga
gtgcagggtctgttctgtgatgcccagcacttcagggttgtaaatgctgc
cattgtcaaacacctgctggatgatcagcccaaagaagcgggagatgttc
aacgttcaacctgttcagcagtgtggcttcattggttcttactttgtccc
cagtttttatcacctgtacatcactcagaatttcagtggtgactctggag
attttagtggtgatgcctaaagctttgagaagaggtctttctcagtccca
gaccagtgttctgagcaggcacagtgacctcacatggggcaatgacacag
ctcgagcagcagctggcaccttattgggccagcagcatgtccgatctcag
tgcgtctcgtgtgtacacgatgcccacgttccgaatgtgaagcagccagt
ttctttcagaggccggtgttctcaagtgccaatgtgcaatcatagatatt
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16488914_16490072
seq2: B6Ng01-312P19.g_66_1218 (reverse)

seq1  AAGAATA-CTATGA-TGCACA-TGGCACCTGGAGAACAACCCGGCTCTG-  46
      ||||||| |||||| |||||| ||||| || |||||| ||| | ||||| 
seq2  AAGAATATCTATGATTGCACATTGGCA-CTTGAGAAC-ACCGGCCTCTGA  48

seq1  AAGAAACT-GCTGCCTCACATCCGGGAACGTGGGCATCGTGTACACCAAG  95
      |||||||| ||||| |||||| | ||||||||||||||||||||||  | 
seq2  AAGAAACTGGCTGCTTCACATTC-GGAACGTGGGCATCGTGTACAC--AC  95

seq1  GAGGACCGCACTGAGATTCGGGACATGCTGCTGG-CCAATAAGGTGCCAG  144
      |||   |||||||||||   |||||||||||||| |||||||||||||||
seq2  GAG--ACGCACTGAGAT--CGGACATGCTGCTGGCCCAATAAGGTGCCAG  141

seq1  CTGCTGCTCGAGCTGGTGTCATTGCCCCATGTGAGGTCACTGTGCCTGCT  194
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTCGAGCT-GTGTCATTGCCCCATGTGAGGTCACTGTGCCTGCT  190

seq1  CAGAACACTGGTCTGGGACCTGAG-AAGACCTCTTTCTTCAAAGCTTTAG  243
      |||||||||||||||||| ||||| ||||||||||   ||||||||||||
seq2  CAGAACACTGGTCTGGGA-CTGAGAAAGACCTCTT--CTCAAAGCTTTAG  237

seq1  GCATCACCACTAAAATCTCCAGAGTCACCACTGAAATTCTGAGTGATGTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACCACTAAAATCTCCAGAGTCACCACTGAAATTCTGAGTGATGTA  287

seq1  CAGGTGATAAAAACTGGGGACAAAGTAAGAACCAATGAAGCCACACTGCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATAAAAACTGGGGACAAAGTAAGAACCAATGAAGCCACACTGCT  337

seq1  GAACAGGTTGAACGTTGAACATCTCCCGCTTCTTTGGGCTGATCATCCAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGTTGAACGTTGAACATCTCCCGCTTCTTTGGGCTGATCATCCAG  387

seq1  CAGGTGTTTGACAATGGCAGCATTTACAACCCTGAAGTGCTGGGCATCAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTTGACAATGGCAGCATTTACAACCCTGAAGTGCTGGGCATCAC  437

seq1  AGAACAGACCCTGCACTCTTGCTTCCCATATGGAGTCGCAATATGGCCAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGACCCTGCACTCTTGCTTCCCATATGGAGTCGCAATATGGCCAG  487

seq1  CGTCTGTCTGCAGATTGCGTACCCAAATCTTGCCTGAGTGCGACATTCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGTCTGCAGATTGCGTACCCAAATCTTGCCTGAGTGCGACATTCCA  537

seq1  TTATCAAAGGGTACAAGCGGGTCCTGGCTTTGTGTGTCGAGACTGAATAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAAGGGTACAAGCGGGTCCTGGCTTTGTGTGTCGAGACTGAATAC  587

seq1  ATCTTCCCGCGTGCTAAAAAGGTGAAGACCTTCCTGGCTGATCTATCTCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCGCGTGCTAAAAAGGTGAAGACCTTCCTGGCTGATCTATCTCC  637

seq1  ATTTGTGGCTGCTGCCCCTGTGGGATAGGTGTGTTTGTGTGGTGGGGGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGGCTGCTGCCCCTGTGGGATAGGTGTGTTTGTGTGGTGGGGGTG  687

seq1  GTGGTGGAGAGGTAACCAGGAAATAGGAATATCATGGAATGGGGGATGAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGAGAGGTAACCAGGAAATAGGAATATCATGGAATGGGGGATGAT  737

seq1  GGAGGGGGTAACCGGGAAGAGGGATATCATTTGAGATGTAGTGAATGGAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGTAACCGGGAAGAGGGATATCATTTGAGATGTAGTGAATGGAA  787

seq1  TGATTAATAATAATAATAATAATAATAATAATAATAATAATAATAGAAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAATAATAATAATAATAATAATAATAATAATAATAATAATAGAAAA  837

seq1  AGAATGATTCTTAAATGGATTTCTCAACTTAAATACAGTCTTTGAATAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATTCTTAAATGGATTTCTCAACTTAAATACAGTCTTTGAATAGA  887

seq1  AAATTTAGCATACATTAATCTGTTTTTTCTAGGGAGAAGCCAACCACATA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGCATACATTAATCTGTTTTTTCTAGGGAGAAGCCAACCACATA  937

seq1  ACAAGGGGCACAAAGTATCAATTAAAGGAAAGAGCAATATGGTGTTTAGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGGCACAAAGTATCAATTAAAGGAAAGAGCAATATGGTGTTTAGA  987

seq1  AAAAAGAAGAGAGAACTGTGACATGGTTTAAGCATTGACTCTTGTCAGAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGAGAGAACTGTGACATGGTTTAAGCATTGACTCTTGTCAGAT  1037

seq1  AAAATCTGCATCCATCAATTCACTGAACCTCCTAGAAGACTGCAACACCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGCATCCATCAATTCACTGAACCTCCTAGAAGACTGCAACACCA  1087

seq1  AAGTCAAGATAACATACCTCAGGAATGCCCATGGAGCAGAAAATAGGGTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGATAACATACCTCAGGAATGCCCATGGAGCAGAAAATAGGGTG  1137

seq1  GTTTTCCAAAGAATTC  1159
      ||||||||||||||||
seq2  GTTTTCCAAAGAATTC  1153