BAC Information

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BAC

Clone NameB6Ng01-313L05
Chromosome10 (Build37)
Map Location 128,980,783 - 128,981,940
singlet/doubletsinglet
Overlap genenone
Upstream geneZc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792
Downstream geneGA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313L05.bB6Ng01-313L05.g
ACCGA104837GA104838
length1,1451,174
definitionB6Ng01-313L05.b B6Ng01-313L05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccagagaagggagaggagacacagtggtagcttctgatagtt
gctccccagtgccctgcttttctaactcatatatatatatatatcattcc
tacttctgagaattaagaacaacataaatgtacttgagctaagaattttt
ctaccacctgttattttgtttttgtagttttgtgtttcactctttttatt
tattttatattattttaaaccctattcctcccacctggagcagctcttgg
ctgtaaacaaattattttaacccatattcctcgtgtcttgagggattcct
tgagatccctttaaaaacaattcatatttacttaatgcttgtcccatagt
ctagccactcttcctacctttctcaaatctgtctcacagtgtgggtgaca
ctgtggcaatctctgtgcagatcttcactcacttcctaatgaagtggcga
tccagtgcagaccttcactcattccctgaagaggcagaggtccaatgtga
accttcactcacctcctgaagaggcagcagttccatgtgagccttcactc
actttttgacaaagcagcgaatcaatgcagaccttcagtcacctcttgaa
gaggtggcagtccaatgagaaccttcactcacctcctggagaggtggcgg
ttcaatctgagccttcactcacttcttgaggaagccatggctcagtgtga
gccttcactcactttttgacaaagtggtggctcagtgcaagtctgcactc
acctcttgacaaagcagtgactcagtgcaaaccttcactcacttcctgac
gaagcagtggttcaatgagagctttcactcacttcttgatgaagtggtgg
ctcaatgtgaagagtggtctctctcagaccccaaacccagaaccccacgt
tgggcgccagttttccccagacctgcagggacatcagcggggacccaggg
caggagaaagagagagagagagtgggagacacaaagacacgaggacccag
gcagagaaagagagagagagagagtggtagaccccaagagacacgaagga
tgagagcagtcaatcatactgatcagctctgaactttattcaggagtggc
aatatagctagcagagggagatcaagggaggggtaagagcttggg
gaattctctgtttagttttataccccattttttgattgtattatttcatt
tctttgtggttatcttctcgagttctttatatattctagatattagccct
ctattggttgtaaggttagtgaagattattttttccaatctttaggttgc
cgatttggtttgtcctattgactatgtcctttgccttacagaagatttcc
agtttcatgaagtcctatttatcagttcttaatcttagagcctgaaccac
tagagttctatgaaggaaatttcccccggtgccaatgagtctgaagctct
ttcccactttttcttctgttagattcagtgtatctggttttatattgagg
tccttgatccacttggacttgagctttgtgcaaggtgacaaatatgtatc
tattttcatttatctacatatagactaccagttaaaccagcactatttat
tgaagatactttcttttttccattgtataattttggcttctctgtcaaag
atcaagtgtctataaatgtgtggatttatttgtgggtcttcaattctatc
tatcaacctatctatctttgtacaaatatcatgctgtttttatcactatt
aatctgtagtatagtttgagcccaaggatggtgattcccccagaagttct
ttgattgttaagaattgttttcgctattctgggttttttgtttttccaga
tgaatttgagaattgttttttttccagaattgtatcgtaattttgatggg
gattgcattgaatctgtagattgtttttggtaggatggccattttactgg
cttttgttttgacttttttgtttgtttgcttgttttgtttttgtttttgt
tacagagttcgtctacatagccctgcctgccctagaagttgctatataga
ccagactggcctcaaaagcatagacttctgcctgagtctgcctcctaagt
gttgggattaaaggcctggagcaccatacctgactgtcttttttttcctc
ctgcgacacatctcatttagcttagttacagtgacttgctgtatactgag
atccacagcatattccatccactcaaccaatatatttaaggatcatagta
gtctggcaggcataatgccttacgattttttcggatgcagatattcacag
tcccacagatattttaacatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128980783_128981940
seq2: B6Ng01-313L05.b_45_1189

seq1  GAATTCTGCCAGAGAAGGGAGAGGAGACACAGTGGTAGCTTCTGATAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCAGAGAAGGGAGAGGAGACACAGTGGTAGCTTCTGATAGTT  50

seq1  GCTCCCCAGTGCCCTGCTTTTCTAACTCATATATATATATATATCATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCAGTGCCCTGCTTTTCTAACTCATATATATATATATATCATTCC  100

seq1  TACTTCTGAGAATTAAGAACAACATAAATGTACTTGAGCTAAGAATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGAGAATTAAGAACAACATAAATGTACTTGAGCTAAGAATTTTT  150

seq1  CTACCACCTGTTATTTTGTTTTTGTAGTTTTGTGTTTCACTCTTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCTGTTATTTTGTTTTTGTAGTTTTGTGTTTCACTCTTTTTATT  200

seq1  TATTTTATATTATTTTAAACCCTATTCCTCCCACCTGGAGCAGCTCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATTATTTTAAACCCTATTCCTCCCACCTGGAGCAGCTCTTGG  250

seq1  CTGTAAACAAATTATTTTAACCCATATTCCTCGTGTCTTGAGGGATTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACAAATTATTTTAACCCATATTCCTCGTGTCTTGAGGGATTCCT  300

seq1  TGAGATCCCTTTAAAAACAATTCATATTTACTTAATGCTTGTCCCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCCTTTAAAAACAATTCATATTTACTTAATGCTTGTCCCATAGT  350

seq1  CTAGCCACTCTTCCTACCTTTCTCAAATCTGTCTCACAGTGTGGGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCACTCTTCCTACCTTTCTCAAATCTGTCTCACAGTGTGGGTGACA  400

seq1  CTGTGGCAATCTCTGTGCAGATCTTCACTCACTTCCTAATGAAGTGGCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCAATCTCTGTGCAGATCTTCACTCACTTCCTAATGAAGTGGCGA  450

seq1  TCCAGTGCAGACCTTCACTCATTCCCTGAAGAGGCAGAGGTCCAATGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGCAGACCTTCACTCATTCCCTGAAGAGGCAGAGGTCCAATGTGA  500

seq1  ACCTTCACTCACCTCCTGAAGAGGCAGCAGTTCCATGTGAGCCTTCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCACTCACCTCCTGAAGAGGCAGCAGTTCCATGTGAGCCTTCACTC  550

seq1  ACTTTTTGACAAAGCAGCGAATCAATGCAGACCTTCAGTCACCTCTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGACAAAGCAGCGAATCAATGCAGACCTTCAGTCACCTCTTGAA  600

seq1  GAGGTGGCAGTCCAATGAGAACCTTCACTCACCTCCTGGAGAGGTGGCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGCAGTCCAATGAGAACCTTCACTCACCTCCTGGAGAGGTGGCGG  650

seq1  TTCAATCTGAGCCTTCACTCACTTCTTGAGGAAGCCATGGCTCAGTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCTGAGCCTTCACTCACTTCTTGAGGAAGCCATGGCTCAGTGTGA  700

seq1  GCCTTCACTCACTTTTTGACAAAGTGGTGGCTCAGTGCAAGTCTGCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACTCACTTTTTGACAAAGTGGTGGCTCAGTGCAAGTCTGCACTC  750

seq1  ACCTCTTGACAAAGCAGTGACTCAGTGCAAACCTTCACTCACTTCCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTGACAAAGCAGTGACTCAGTGCAAACCTTCACTCACTTCCTGAC  800

seq1  GAAGCAGTGGTTCAATGAGAGCTTTCACTCACTTCTTGATGAAGTGGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTGGTTCAATGAGAGCTTTCACTCACTTCTTGATGAAGTGGTGG  850

seq1  CTCAATGTGAAGAGTGGTCTCTCTCAGACCCCAAACCCAGAACCCCACGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTGAAGAGTGGTCTCTCTCAGACCCCAAACCCAGAACCCCACGT  900

seq1  TGGGCGCCAGTTTTCCCCAGACCTGCAGGGACAATCAGCGGGGACCCAGG  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGGCGCCAGTTTTCCCCAGACCTGCAGGGAC-ATCAGCGGGGACCCAGG  949

seq1  GCAGGAGAAAGAGAGAGAGAGAGTGGGAGACACAAAAGACACGAGGACCC  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCAGGAGAAAGAGAGAGAGAGAGTGGGAGACAC-AAAGACACGAGGACCC  998

seq1  AGGGCAGGAGAAAGAGAGAGAGAGAGAGTGGGAGA-CACAAGAGACACGA  1049
      | |||| |||||||||||||||||||||||| ||| | ||||||||||||
seq2  A-GGCA-GAGAAAGAGAGAGAGAGAGAGTGGTAGACCCCAAGAGACACGA  1046

seq1  GGAATGAGAGCAAGTCAATCATACTGATCAAGCTCTGAAAACTTTATTCA  1099
       | |||||||| ||||||||||||||||| |||||||  |||||||||||
seq2  AGGATGAGAGC-AGTCAATCATACTGATC-AGCTCTG--AACTTTATTCA  1092

seq1  GGAGTGGCAATATAAGCATAAGCAAGAGGAGGATCCAAGGGAGGGGGAAA  1149
      ||||||||||||| |||   ||| |||||  ||| ||||||| |||| ||
seq2  GGAGTGGCAATAT-AGC--TAGC-AGAGGGAGAT-CAAGGGA-GGGGTAA  1136

seq1  GAGCCTGGG  1158
      |||| ||||
seq2  GAGCTTGGG  1145