BAC Information

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BAC

Clone NameB6Ng01-313N19
Chromosome10 (Build37)
Map Location 104,015,036 - 104,016,149
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313N19.bB6Ng01-313N19.g
ACCGA104956GA104957
length1,1071,178
definitionB6Ng01-313N19.b B6Ng01-313N19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtattgcctttgctttccaactttcatctcaattttgtatgta
agtacagaaaactgtccctgcctctggtgtctataggcattaaaacacta
ctgaaagagcagtttcacagtagggattttacatacctggaagcagctga
tctatgagctatgtaaaagtcataaaagtagagatgcgagcagtgttaat
attctgtgaattttgtatcataaacacaaatattcatgacctggtcttat
aatcaattgccttcagagtagaatagctcttttttggggtatttgctata
ttaacatgatcttagttttccatggcagcagatcattgtggctataagta
ccaccttcctttactttagtaaagtatactagaaaagtcactttatagta
cttgtagagtttgtatctttttaggagaacaaaaataaaaatctaagaga
agaaataccaagcaaaccgataaaggtgacaagaggtgatagaagttgct
cttgagcagaacagctgtttaagcaaaactcagtgttataagcttctgtt
gtgtgaagaaggtattcagcctgcagggtctctatgaacatacttaaaca
cagcaagaagataaaattgagaattttaagtaccagtaatgtttcaattt
ccaagttgcaactgtttgagtttgggattccacagctgtgaagagacacc
atgacaaagacaaccattctaaaggataaaatttaattagggttggcttc
caggctcagaagttcagtgtattatcaacaaggcaggagcatgatggagt
ccaagcaggcatggtgaaggagggtttccattataatctgaaaggccacc
agaagattgtctcatgggcagctaggaggagggtatcaaagtcccccttg
caagtgacacacttcttccaataaatgacacatactcccaagaggccaag
cttcctaatagtccctgggccaaacatattcaaaccatcatgtcccactc
gctggcatccatagtcttgtcaaattcttgactctatggggatatactag
tacagaataatacaaaatacgttgtctaacttcagacgtccatagtctat
agcagtc

gaattcctcagccagtcccacaaaacccagaggaagctccactcccaggt
gctctaacatgcccaggaccacaggatcccaggatcccaggagcttggac
acagcagaatctcagggtcccagaggcaggttgactcccaggagctctga
cacacccagtaacacaggatcccagatcacagagacaactgaactctgag
gagctctgacacacagaggatcacaggaaggaaaggtcccagtcagatag
agcaagggcaggcagcacgagagataatcagatagtaaaaggcaaacata
agaacataagcaacaaaaaccaaaattaattggcatcatcagaacccaat
tatccaatcatagaaagtcctgtatataccatcacaccataaaagcaaga
tttggatctaaaatcacttctcatgatggtgataaaggaatttaagaaag
tcataaataactcccaaaaaagaaacacaggagaacaaaggtaaacagct
agaagcccttaaagaggaaacataaaaatcccttaaaagattacaggaaa
acacaattaaagaggtgaaggaaatgaacagaaccatccaaggtctaaaa
atggaaatagagacaataaagaaatcacaaaaggagacaacacttgagtt
agaaaacctaggaaagagatcaggagacatagatgcaagcatcaccaaca
gaatacaagagatagaatagagaatcttgggtgcagaagatagcatagaa
aacattgacacaacagtcaaagacaaggaaaaaggcaaaaagctcctaac
ccaaaacatccaggaaacccaggacacaatgaaaagacgaaacctatgga
taataggtagagaagagagcaagattccaaagtttaaagggccagtaaat
atcttcaaaaaaattataggaaaaaacttcctttacctaagaaagagtgc
ccatgaatatacagagctcacagactccaatagactggacgtgaaataac
tcctcccttcatgtaatatcaaacaccaatgcacaaacaagaaagaatac
taaagcataaagaaaagtcaaataacatataaagtagactatcggagtaa
cccggacttctcacgactatgaagcctagaagattcctgggccagtgttc
aatacaggaaacccttagaggagatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104015036_104016149
seq2: B6Ng01-313N19.b_46_1152 (reverse)

seq1  GACTGCTATAGACTATGGGACGTCTGAAGTTAGACAAACGTATTTTGTAT  50
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  GACTGCTATAGACTAT-GGACGTCTGAAGTTAGAC-AACGTATTTTGTAT  48

seq1  TATTCTGTAACTAGGTATAATCCCCATAGAGTCAAGAATTTGAACAAGAC  100
      |||||||| |||| |||| ||||||||||||||||||||||| |||||||
seq2  TATTCTGT-ACTA-GTAT-ATCCCCATAGAGTCAAGAATTTG-ACAAGAC  94

seq1  TATGGATGCCAGCGAGTGGGACATGATGGTTTGAATATGTTTGGCCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATGCCAGCGAGTGGGACATGATGGTTTGAATATGTTTGGCCCAGG  144

seq1  GACTATTAGGAAGCTTGGCCTCTTGGGAGTATGTGTCATTTTATTGGAAG  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GACTATTAGGAAGCTTGGCCTCTTGGGAGTATGTGTCA-TTTATTGGAAG  193

seq1  AAGTGTGTCACTTTGCAAGGGGGACTTTGATACCCTCCTCCTAGCTGCCC  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTCAC-TTGCAAGGGGGACTTTGATACCCTCCTCCTAGCTGCCC  242

seq1  ATGAGACAATCTTCTGGTGGCC-TTCAGATTATAATGGAAACCCTCCTTC  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGAGACAATCTTCTGGTGGCCTTTCAGATTATAATGGAAACCCTCCTTC  292

seq1  ACCATGCCTGCTTGGACTCCATCATGCTCCTGCCTTGTTGATAATACACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCTGCTTGGACTCCATCATGCTCCTGCCTTGTTGATAATACACT  342

seq1  GAACTTCTGAGCCTGGAAGCCAACCCTAATTAAATTTTATCCTTTAGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTGAGCCTGGAAGCCAACCCTAATTAAATTTTATCCTTTAGAAT  392

seq1  GGTTGTCTTTGTCATGGTGTCTCTTCACAGCTGTGGAATCCCAAACTCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTTTGTCATGGTGTCTCTTCACAGCTGTGGAATCCCAAACTCAA  442

seq1  ACAGTTGCAACTTGGAAATTGAAACATTACTGGTACTTAAAATTCTCAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCAACTTGGAAATTGAAACATTACTGGTACTTAAAATTCTCAAT  492

seq1  TTTATCTTCTTGCTGTGTTTAAGTATGTTCATAGAGACCCTGCAGGCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCTTGCTGTGTTTAAGTATGTTCATAGAGACCCTGCAGGCTGA  542

seq1  ATACCTTCTTCACACAACAGAAGCTTATAACACTGAGTTTTGCTTAAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTCTTCACACAACAGAAGCTTATAACACTGAGTTTTGCTTAAACA  592

seq1  GCTGTTCTGCTCAAGAGCAACTTCTATCACCTCTTGTCACCTTTATCGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTGCTCAAGAGCAACTTCTATCACCTCTTGTCACCTTTATCGGT  642

seq1  TTGCTTGGTATTTCTTCTCTTAGATTTTTATTTTTGTTCTCCTAAAAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGGTATTTCTTCTCTTAGATTTTTATTTTTGTTCTCCTAAAAAGA  692

seq1  TACAAACTCTACAAGTACTATAAAGTGACTTTTCTAGTATACTTTACTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTCTACAAGTACTATAAAGTGACTTTTCTAGTATACTTTACTAA  742

seq1  AGTAAAGGAAGGTGGTACTTATAGCCACAATGATCTGCTGCCATGGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGGAAGGTGGTACTTATAGCCACAATGATCTGCTGCCATGGAAAA  792

seq1  CTAAGATCATGTTAATATAGCAAATACCCCAAAAAAGAGCTATTCTACTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATCATGTTAATATAGCAAATACCCCAAAAAAGAGCTATTCTACTC  842

seq1  TGAAGGCAATTGATTATAAGACCAGGTCATGAATATTTGTGTTTATGATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAATTGATTATAAGACCAGGTCATGAATATTTGTGTTTATGATA  892

seq1  CAAAATTCACAGAATATTAACACTGCTCGCATCTCTACTTTTATGACTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCACAGAATATTAACACTGCTCGCATCTCTACTTTTATGACTTT  942

seq1  TACATAGCTCATAGATCAGCTGCTTCCAGGTATGTAAAATCCCTACTGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGCTCATAGATCAGCTGCTTCCAGGTATGTAAAATCCCTACTGTG  992

seq1  AAACTGCTCTTTCAGTAGTGTTTTAATGCCTATAGACACCAGAGGCAGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTCTTTCAGTAGTGTTTTAATGCCTATAGACACCAGAGGCAGGG  1042

seq1  ACAGTTTTCTGTACTTACATACAAAATTGAGATGAAAGTTGGAAAGCAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCTGTACTTACATACAAAATTGAGATGAAAGTTGGAAAGCAAA  1092

seq1  GGCAATACAGAATTC  1114
      |||||||||||||||
seq2  GGCAATACAGAATTC  1107


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