BAC Information

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BAC

Clone NameB6Ng01-314F02
Chromosome10 (Build37)
Map Location 30,031,649 - 30,032,708
singlet/doubletsinglet
Overlap genenone
Upstream geneEchdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik
Downstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314F02.bB6Ng01-314F02.g
ACCGA105286GA105287
length1,1871,039
definitionB6Ng01-314F02.b B6Ng01-314F02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcaatgtaatccactatataaacaaactcaaagacaaaacct
acatgatcatctcatgagatgctgagaaagcatttgacaaaatccaacat
cccttcatgataaaagtcttgcaaagaacaggaattgccctccttggcat
atagccagaagatgctccaacgtgtaataaggatacatgatccactacgt
tcatagcagccttatttataatagacagaagctggaaagaaccccgatgg
tcctcaacagaggaatagttataaaaaatgtggtgctgagctatagtggt
gcacaagtttaaaaacagcacttgggaggcagaggcaatataccatataa
ataaaccacatgatcatctcagaagatgcagaaaaagcctttgacaaaaa
cccagcatccttcatgataaaagccctggagagactagggattgaagtga
catatgtttgttttttgttttttgtttgttgttttttattacgtattttc
ctcaattacatttccaatgctatcccaaaagtcccccataccctcccccc
caattccctacccactcattcccatttttttggccctggcgttcccctgt
actggggcatataaagtttgtgtgtccaatgggcctctctttccagtgat
ggccgactaggccatcttttgatacatatgtagctagagtcaagagctcc
agggtactggttagttcataatgttgttccacctatatggttgcagatcc
ctttagctccttggatactttctctagctcctccattgggggccctgtga
tccatccaatagctgactgtgagcatccacttctgtgtttgctaggcccc
ggcttagtctcacaagagacagctatatctgggtcctttcagcaaaatct
tgctagtgtatgcaatggtgtcagcatttgggaagctgattatggggtgg
atccctagataaggcagactctagatggtccatccttttggaagtgacat
atgtttattttaatacaggtaatttagagcaatcccacagccatcaccaa
tcaaaaacagaagagaactcaagcatttaccacttaaaatcatgaacaga
ccaggatgtccctctgtctcatacctaagttcgattaagaacattgaagt
tcttctagtcctttgtgagccaatttagagaacaacg
gaattcttttcctttggaacttttgttttttttaaatgttatgtcctctt
caatctatccaagaaagaaagcaaaactttaatttacaattagaaggtac
tgagatattggtttgatacactattcttttttttcctagaatatgatata
agtaaaaatttaaggtaagttctagaatatttaggaaatttaagaaaatg
gctaagacataatgaatctatgaaaaggtgaaggcaaatgttctaattaa
aatgaactagattaaaatgaattagatatgtagaatctatccaataatat
atgtatatatgtaaacaaatgtacatgtgggtataagtaaacatgaagaa
aagaaaactagaaggctatataaggggatgagacaggactgatgaaaggt
aatggacacagtttagaaaaataaaaggctagttacttttctagttataa
ttctgtgaacagattttttttttttttttttttttggttttggtagtgaa
ttagtgaataaaatacatttgatactgaaagtgtaaaacttaagatgaag
cttctctgttctattctgaatgccattctgattgtagagatgttcattga
gttgaatagacattgcatctaactaattttggtatgtgcgactggataca
taaacaatatccagtattttgctacatacagaaaatacacctcagggtca
aagacaaacactaccctagagtaaaaggctggaaaataattttccaagca
aatggttctaagaaacaagctggaatagccgttttaatatcgaaaaaaat
ctatgttcaacctaagttatcaaaaaagatatagaagaaaacttccctga
cctaagaaagagatgcccagaaaacatatgaagcctacagaactccaatg
cagcggaccagaaaatagttcctcccatctcatatatcaaacacaaattc
acaacatagaacatattaaagagtaagaaaagtcagaaacatatgaggcg
acctactaagtacacggacctctcgccagagactacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30031649_30032708
seq2: B6Ng01-314F02.g_65_1103 (reverse)

seq1  TTTGTAGTCTCTGGCGAGAAGTCTGGTGTAATTTTGGTAAGTCTGCCTTC  50
      ||||||||||||||||||| |||  |||||   || ||| ||| ||| ||
seq2  TTTGTAGTCTCTGGCGAGAGGTC-CGTGTA--CTTAGTAGGTC-GCC-TC  45

seq1  ATATGTTTCTTGACTTTTTCCTTTACTTCTTTTAATATTGTCTATGTTTT  100
      ||||||||| ||||||||    |||||   ||||||||  ||||||  ||
seq2  ATATGTTTC-TGACTTTT---CTTACT--CTTTAATATGTTCTATG--TT  87

seq1  GTGAATTTGGTGTTTTGATTATTATGAGATGGGAGGAACTTATTTTCTGG  150
      |||||||| ||| ||||||   ||||||||||||||||| ||||||||||
seq2  GTGAATTT-GTG-TTTGAT--ATATGAGATGGGAGGAAC-TATTTTCTGG  132

seq1  TCCGCTGCATTTGGAGTTCTGTAGGCTTCATATGTTTTCTGGGCATCTCT  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTGCA-TTGGAGTTCTGTAGGCTTCATATGTTTTCTGGGCATCTCT  181

seq1  TTCTTTAGGTCAGGGAAGTTTTCTTCTATATCTTTTTTGATAACTTTAGG  250
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTC-TTAGGTCAGGGAAGTTTTCTTCTATATCTTTTTTGATAAC-TTAGG  229

seq1  TTGAACATAGATTTTTTTCGATATTAAAACGGCTATTCCAGCTTGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATAGATTTTTTTCGATATTAAAACGGCTATTCCAGCTTGTTTCT  279

seq1  TAGAACCATTTGCTTGGAAAATTATTTTCCAGCCTTTTACTCTAGGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCATTTGCTTGGAAAATTATTTTCCAGCCTTTTACTCTAGGGTAG  329

seq1  TGTTTGTCTTTGACCCTGAGGTGTATTTTCTGTATGTAGCAAAATACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCTTTGACCCTGAGGTGTATTTTCTGTATGTAGCAAAATACTGG  379

seq1  ATATTGTTTATGTATCCAGTCGCACATACCAAAATTAGTTAGATGCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTTATGTATCCAGTCGCACATACCAAAATTAGTTAGATGCAATG  429

seq1  TCTATTCAACTCAATGAACATCTCTACAATCAGAATGGCATTCAGAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAACTCAATGAACATCTCTACAATCAGAATGGCATTCAGAATAG  479

seq1  AACAGAGAAGCTTCATCTTAAGTTTTACACTTTCAGTATCAAATGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAAGCTTCATCTTAAGTTTTACACTTTCAGTATCAAATGTATTT  529

seq1  TATTCACTAATTCACTACCAAAACCAAAAAAAAAAAAAAAAAAAAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTAATTCACTACCAAAACCAAAAAAAAAAAAAAAAAAAAAATCT  579

seq1  GTTCACAGAATTATAACTAGAAAAGTAACTAGCCTTTTATTTTTCTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACAGAATTATAACTAGAAAAGTAACTAGCCTTTTATTTTTCTAAAC  629

seq1  TGTGTCCATTACCTTTCATCAGTCCTGTCTCATCCCCTTATATAGCCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCATTACCTTTCATCAGTCCTGTCTCATCCCCTTATATAGCCTTC  679

seq1  TAGTTTTCTTTTCTTCATGTTTACTTATACCCACATGTACATTTGTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTTTTCTTCATGTTTACTTATACCCACATGTACATTTGTTTAC  729

seq1  ATATATACATATATTATTGGATAGATTCTACATATCTAATTCATTTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATATTATTGGATAGATTCTACATATCTAATTCATTTTAAT  779

seq1  CTAGTTCATTTTAATTAGAACATTTGCCTTCACCTTTTCATAGATTCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCATTTTAATTAGAACATTTGCCTTCACCTTTTCATAGATTCATT  829

seq1  ATGTCTTAGCCATTTTCTTAAATTTCCTAAATATTCTAGAACTTACCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAGCCATTTTCTTAAATTTCCTAAATATTCTAGAACTTACCTTA  879

seq1  AATTTTTACTTATATCATATTCTAGGAAAAAAAAGAATAGTGTATCAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTACTTATATCATATTCTAGGAAAAAAAAGAATAGTGTATCAAAC  929

seq1  CAATATCTCAGTACCTTCTAATTGTAAATTAAAGTTTTGCTTTCTTTCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTCAGTACCTTCTAATTGTAAATTAAAGTTTTGCTTTCTTTCTT  979

seq1  GGATAGATTGAAGAGGACATAACATTTAAAAAAAACAAAAGTTCCAAAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATTGAAGAGGACATAACATTTAAAAAAAACAAAAGTTCCAAAGG  1029

seq1  AAAAGAATTC  1060
      ||||||||||
seq2  AAAAGAATTC  1039