BAC Information

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BAC

Clone NameB6Ng01-314N02
Chromosome10 (Build37)
Map Location 35,741,861 - 35,742,960
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041585
Downstream geneLOC667860, Hs3st5, Hdac2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314N02.bB6Ng01-314N02.g
ACCGA105635GA105636
length951,092
definitionB6Ng01-314N02.b B6Ng01-314N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actttgtagaccaggttggcctcaaactcagaaattcgactgcctctgcc
tctgcctcccaagtgctgggattaaaggcgtgcaccaccatgccc

gaattctatttaacttccaatttaagaatatgttctaactttatctactt
atcctcatccccttaactactatgcattattttcaggaaaggtctgtgtg
ctgcgtttacacaatatatttgtaatatgattagttatatgatattttga
aattatttttgaagatacttttgtctagcaagaaacattagcattttaaa
aatttatttgtaagatgcttctttaataaacttttaatatttataattta
ttgtctgtgatatttcttaattggtacttaattaagaattttgtaaactt
ccttctttaacagtgcttttatcattgctgactgctgcaattactagctt
ctcctcccagaacagtactggcagtcataatagtactacaaattcttgtt
catggttttaatggaaatagcttttatatttcaaggataagtttaatgtt
gtctttgacttcaatagagaacatttactgtaaaggcaacttttcccttc
cattagtgtattgccacaatcttaaaataagagtttattgttagacacca
tgaaattgtcttcttgtattttgtagaaagtagtatttttctcttattga
ttatatgcactggtaatcatagctggcttaatcccaagttttcctaaaac
aaatcttatctggatatgctataacattaatagtaataataatatatgta
aaaagtgaaatatagttacaaaattatttttactttcatgacattcttca
aatgtttaataaccaaaataagatgtttaataaagaaaaatggtgtccca
caatgtcctcctctgctgtatatgtagctggagccatgagtccctccatg
tgcactctttgtttgatggctttgtccctgggagctctgggggtactggt
tggttcatattgttgtttctcctgggggctgcaaacccctttcagctcct
tgggtcctttctctagctctcattgtgggcccgtgttcagtcatggatgg
ctgtgaaaatccacttctgtatttgtgggacatcactgaaggaaagtcct
tgtcttgtgacgattgaatgccccaaagtaagggcatgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35741861_35742960
seq2: B6Ng01-314N02.g_67_1158

seq1  GAATTCTATTTAACTTCCAATTTAAGAATATGTTCTAACTTTATCTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAACTTCCAATTTAAGAATATGTTCTAACTTTATCTACTT  50

seq1  ATCCTCATCCCCTTAACTACTATGCATTATTTTCAGGAAAGGTCTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCATCCCCTTAACTACTATGCATTATTTTCAGGAAAGGTCTGTGTG  100

seq1  CTGCGTTTACACAATATATTTGTAATATGATTAGTTATATGATATTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTTTACACAATATATTTGTAATATGATTAGTTATATGATATTTTGA  150

seq1  AATTATTTTTGAAGATACTTTTGTCTAGCAAGAAACATTAGCATTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTTGAAGATACTTTTGTCTAGCAAGAAACATTAGCATTTTAAA  200

seq1  AATTTATTTGTAAGATGCTTCTTTAATAAACTTTTAATATTTATAATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTGTAAGATGCTTCTTTAATAAACTTTTAATATTTATAATTTA  250

seq1  TTGTCTGTGATATTTCTTAATTGGTACTTAATTAAGAATTTTGTAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTGATATTTCTTAATTGGTACTTAATTAAGAATTTTGTAAACTT  300

seq1  CCTTCTTTAACAGTGCTTTTATCATTGCTGACTGCTGCAATTACTAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTAACAGTGCTTTTATCATTGCTGACTGCTGCAATTACTAGCTT  350

seq1  CTCCTCCCAGAACAGTACTGGCAGTCATAATAGTACTACAAATTCTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCAGAACAGTACTGGCAGTCATAATAGTACTACAAATTCTTGTT  400

seq1  CATGGTTTTAATGGAAATAGCTTTTATATTTCAAGGATAAGTTTAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTTAATGGAAATAGCTTTTATATTTCAAGGATAAGTTTAATGTT  450

seq1  GTCTTTGACTTCAATAGAGAACATTTACTGTAAAGGCAACTTTTCCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGACTTCAATAGAGAACATTTACTGTAAAGGCAACTTTTCCCTTC  500

seq1  CATTAGTGTATTGCCACAATCTTAAAATAAGAGTTTATTGTTAGACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTGTATTGCCACAATCTTAAAATAAGAGTTTATTGTTAGACACCA  550

seq1  TGAAATTGTCTTCTTGTATTTTGTAGAAAGTAGTATTTTTCTCTTATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTCTTCTTGTATTTTGTAGAAAGTAGTATTTTTCTCTTATTGA  600

seq1  TTATATGCACTGGTAATCATAGCTGGCTTAATCCCAAGTTTTCCTAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCACTGGTAATCATAGCTGGCTTAATCCCAAGTTTTCCTAAAAC  650

seq1  AAATCTTATCTGGATATGCTATAACATTAATAGTAATAATAATATATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTATCTGGATATGCTATAACATTAATAGTAATAATAATATATGTA  700

seq1  AAAAGTGAAATATAGTTACAAAATTATTTTTACTTTCATGACATTCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAAATATAGTTACAAAATTATTTTTACTTTCATGACATTCTTCA  750

seq1  AATGTTTAATAACCAAAATAAGATGTTTAATAAAGAAAAATGGTGTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTAATAACCAAAATAAGATGTTTAATAAAGAAAAATGGTGTCCCA  800

seq1  CAATGTCCTCCTCTGCTGTATATGTAGCTGGAGCCATGAGTCCCTCCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCCTCCTCTGCTGTATATGTAGCTGGAGCCATGAGTCCCTCCATG  850

seq1  TGCACTCTTTGTTTGATGGCTTTGTCCCTGGGAGCTCTGGGGGTACTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTTTGTTTGATGGCTTTGTCCCTGGGAGCTCTGGGGGTACTGGT  900

seq1  TGGTTCATATTGTTGTTTCTCCTGGGGGCTGCAAACCCCTTTCAGCTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCATATTGTTGTTTCTCCTGGGGGCTGCAAACCCCTTTCAGCTCCT  950

seq1  TGGGTCCTTTCTCTAGCTCCTCCATTGTGGGCCCGGTGTTCAGTCCAATG  1000
      |||||||||||||||||||   |||||||||||| ||||||||||  |||
seq2  TGGGTCCTTTCTCTAGCTC--TCATTGTGGGCCC-GTGTTCAGTC--ATG  995

seq1  GATGGCTGTGAAAATCCACTTCTGTATTTGTGGGACATCACTGAGAGGAA  1050
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GATGGCTGTGAAAATCCACTTCTGTATTTGTGGGACATCACTGA-AGGAA  1044

seq1  AGGCCCTTGGTCCTGTGAAGGATTG-ATGCCCCAGAGTAGGGGGATGTCA  1099
      || ||  | ||| |||| | ||||| |||||||| |||| ||| ||||||
seq2  AGTCC--TTGTCTTGTG-ACGATTGAATGCCCCAAAGTAAGGGCATGTCA  1091

seq1  G  1100
      |
seq2  G  1092


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