BAC Information

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BAC

Clone NameB6Ng01-315A03
Chromosome10 (Build37)
Map Location 24,217,726 - 24,339,283
singlet/doubletdoublet
Overlap geneLOC628537, Ctgf
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
Downstream geneEnpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315A03.bB6Ng01-315A03.g
ACCGA105773GA105774
length6681,134
definitionB6Ng01-315A03.b B6Ng01-315A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,338,614 - 24,339,283)(24,217,726 - 24,218,437)
sequence
gaattcatttttcaactttctcattttcttatattatttgaccccccccc
cacaggtttacataggggtgtgtgtgtgcgcatgtgcgcgtgtgtgtgtg
tttgggggggggtgcatgcccacatacagacccctgtgtgggcctctgaa
gagttcataggctctagcacctgtgtactccccagaagacattgaagctc
aaaggatgtttgatccaggaactattctaagtgaggcaaatgtatgccag
acatgcaccttgcaaagaaacagaaattacatgtctagcaccatccaaag
gtcgtcagctcctgcttccacgttcctgccctgaatggatgcctgtcctg
acttcctccaatgatgtactgagatctggaagtgtaagccaaataaattc
ttccctccccaacttaatttttggtcatggtgtttcatcacagctgtagt
aaccctaacgaggacaatatacttacaaactaacaaacaaacaaacaaac
aaacaaacaaaaaaacccaaacccagccaaaggcagaatttgatgcggga
agttggtctgtttaatgttttaaatgatgtataggggaatcttcgttata
agaatatgcaaggctgtatatggtccaatcctgaagacattctcacccat
cttaaaattggctcttgc
gaattctttagcaagtctctgaagaaagaaattgaagatctcagaaggtg
aaaagatctcccatgctcatggattggcaggattaatatagtaaaagtgg
ccatcttgctgaatgcaatctacaggttcaatgcaatccccatcaaaatt
ccaactcaattcttcatcgagttagaaagggcaatttgcaaatttatctg
gaatatcaaaaaacctaggatagcaaaaactattctcaacaataaaagaa
cctctggtagaatcaccatccctgacctcaagctgtactatagagcaatt
gtgatgaaaactgcatggtactggtataatgacagacaggtagatcaata
gaatagaattgaagacccagaaatgaattcacttacctatggtcccttga
tctttgacaagggagctagaagcatccagtggaaaaaagacagaattttc
aacaaatggtgctggttcaactggaggttagcatgtagaagagtgtgaat
tgatccattcttatctccttgtacaaagctcaagtctaagtggatcaaga
acctcaacataaaaccagagacactgaaacttatacaggagaaagtgggg
aagagccttgaggatatgggcacaagggaaaaattcctgaacagaacacc
aatggcttgtgctgtaagatcaagatttgacaaatgggacctcataaaac
tgcatagctcctgtaaggcaaagaacactgtcaataagacaaaaaggcca
ccaacagattgggaaagggtctttttcaatcctaaatctgatagggggct
aatgtccaatatataaatatatacaaaaacaaaaacaaaaccctcaacaa
gttagactccagaaaaccaaataaccctattaaaaatggggtacagagtt
aaacaaagaatacatcatctcttaattcatgagaaaatgatcaacatttg
atgctacaaaagctgctgctcatcattcagtgaaatctgtacctaattgc
agtgctctactccaggaaagccagtcacttgcacttctgaacctgactga
ataacagaagactctaaccccatgttccagggaagaagagaaaagctctg
cggttgtagaatgaaaatatggaagctctgtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24338614_24339283
seq2: B6Ng01-315A03.b_45_712 (reverse)

seq1  GGAAGAGCCAATTTTAAGATGGGTGGGAATGTCTTCAGGATTGGGACCTA  50
      | ||||||||||||||||||||||| |||||||||||||||| |||||  
seq2  GCAAGAGCCAATTTTAAGATGGGTGAGAATGTCTTCAGGATT-GGACCAT  49

seq1  AGGCAGCCTTGCATATTCTTATAACGGAGGTTCCCCTCTACATCATTTAA  100
      |  ||||||||||||||||||||||| || ||||||| ||||||||||||
seq2  ATACAGCCTTGCATATTCTTATAACGAAGATTCCCCTATACATCATTTAA  99

seq1  AACATTAAAACAGACCAACTTCCCGCATCAAATTCTGCCTTTGGCTGGGT  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACATT-AAACAGACCAACTTCCCGCATCAAATTCTGCCTTTGGCTGGGT  148

seq1  TTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTAAGG  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  TTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTAGTTTGTAAGT  198

seq1  ATATTGTCCTCGTTAGGGTTACTACTGCTGTGATGAAACACCATGACCAA  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATATTGTCCTCGTTAGGGTTACTACAGCTGTGATGAAACACCATGACCAA  248

seq1  AAATTAAGTTGGGGAGGGAAGAATTTATTTGGCTTACACTTCCAGATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGTTGGGGAGGGAAGAATTTATTTGGCTTACACTTCCAGATCTC  298

seq1  AGTACATCATTGGAGGAAGTCAGGACAGGCATCCATTCAGGGCAGGAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATCATTGGAGGAAGTCAGGACAGGCATCCATTCAGGGCAGGAACG  348

seq1  TGGAAGCAGGAGCTGACGACCTTTGGATGGTGCTAGACATGTAATTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAGGAGCTGACGACCTTTGGATGGTGCTAGACATGTAATTTCTG  398

seq1  TTTCTTTGCAAGGTGCATGTCTGGCATACATTTGCCTCACTTAGAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGCAAGGTGCATGTCTGGCATACATTTGCCTCACTTAGAATAGT  448

seq1  TCCTGGATCAAACATCCTTTGAGCTTCAATGTCTTCTGGGGAGTACACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATCAAACATCCTTTGAGCTTCAATGTCTTCTGGGGAGTACACAG  498

seq1  GTGCTAGAGCCTATGAACTCTTCAGAGGCCCACACAGGGGTCTGTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGAGCCTATGAACTCTTCAGAGGCCCACACAGGGGTCTGTATGTG  548

seq1  GGCATGCACCCCCCCCCAAACACACACACACGCGCACATGCGCACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACCCCCCCCCAAACACACACACACGCGCACATGCGCACACACA  598

seq1  CACCCCTATGTAAACCTGTGGGGGGGGGGTCAAATAATATAAGAAAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTATGTAAACCTGTGGGGGGGGGGTCAAATAATATAAGAAAATGA  648

seq1  GAAAGTTGAAAAATGAATTC  670
      ||||||||||||||||||||
seq2  GAAAGTTGAAAAATGAATTC  668

seq1: chr10_24217726_24218437
seq2: B6Ng01-315A03.g_487_1198

seq1  CATCCAGTGGAAAAAAGACAGAATTTTCAACAAATGGTGCTGGTTCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAAAAAGACAGAATTTTCAACAAATGGTGCTGGTTCAACT  50

seq1  GGAGGTTAGCATGTAGAAGAGTGTGAATTGATCCATTCTTATCTCCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTAGCATGTAGAAGAGTGTGAATTGATCCATTCTTATCTCCTTGT  100

seq1  ACAAAGCTCAAGTCTAAGTGGATCAAGAACCTCAACATAAAACCAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTCAAGTCTAAGTGGATCAAGAACCTCAACATAAAACCAGAGAC  150

seq1  ACTGAAACTTATACAGGAGAAAGTGGGGAAGAGCCTTGAGGATATGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATACAGGAGAAAGTGGGGAAGAGCCTTGAGGATATGGGCA  200

seq1  CAAGGGAAAAATTCCTGAACAGAACACCAATGGCTTGTGCTGTAAGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAAAATTCCTGAACAGAACACCAATGGCTTGTGCTGTAAGATCA  250

seq1  AGATTTGACAAATGGGACCTCATAAAACTGCATAGCTCCTGTAAGGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGACAAATGGGACCTCATAAAACTGCATAGCTCCTGTAAGGCAAA  300

seq1  GAACACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGGTCT  350

seq1  TTTTCAATCCTAAATCTGATAGGGGGCTAATGTCCAATATATAAATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATCCTAAATCTGATAGGGGGCTAATGTCCAATATATAAATATAT  400

seq1  ACAAAAACAAAAACAAAACCCTCAACAAGTTAGACTCCAGAAAACCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAAACAAAACCCTCAACAAGTTAGACTCCAGAAAACCAAAT  450

seq1  AACCCTATTAAAAATGGGGTACAGAGTTAAACAAAGAATACATCATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATTAAAAATGGGGTACAGAGTTAAACAAAGAATACATCATCTCT  500

seq1  TAATTCATGAGAAAATGATCAACATTTGATGCTAC-AAAGCTGCTGCTCA  549
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAATTCATGAGAAAATGATCAACATTTGATGCTACAAAAGCTGCTGCTCA  550

seq1  TCATTCAGGTGAAATCTGTACCTAATTGCAGTGCTCTACTCCAGGAAAGC  599
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCA-GTGAAATCTGTACCTAATTGCAGTGCTCTACTCCAGGAAAGC  599

seq1  CAGTCACTTGCAACCTTCCTGAACCCTGACTG-ATAACAG-AGACTCTTA  647
      ||||||||||||  ||| ||||| |||||||| ||||||| |||||| ||
seq2  CAGTCACTTGCA--CTT-CTGAA-CCTGACTGAATAACAGAAGACTC-TA  644

seq1  ACCCCATGTTCCCAGGAAG-AGAGAAAAGCTCTGCGGTTGTAG-ATGAAT  695
      ||||||||||||  ||||| ||||||||||||||||||||||| ||||| 
seq2  ACCCCATGTTCCAGGGAAGAAGAGAAAAGCTCTGCGGTTGTAGAATGAAA  694

seq1  A-ATTGGAGCTCTGTACA  712
      | || | |||||||||||
seq2  ATATGGAAGCTCTGTACA  712