BAC Information

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BAC

Clone NameB6Ng01-315A14
Chromosome10 (Build37)
Map Location 34,596,269 - 34,597,368
singlet/doubletsinglet
Overlap genenone
Upstream geneSult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse, Tspyl1, Tspyl4, Nt5dc1, Col10a1, Frk
Downstream geneLOC667824, LOC100041585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315A14.bB6Ng01-315A14.g
ACCGA105795GA105796
length1,2031,094
definitionB6Ng01-315A14.b B6Ng01-315A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttatgggagcctaaaggaaagtaggaaaattggctttatcaa
aggagagctagctggcatcatttgccttccagtcactgtgtgctgaaaaa
gttcattgcttagctgacatcttgactatgaaagtcttgaaaggctggat
aggtgagctagttcttctggaaaagttctggaagcaagtctttaaaagaa
gcagctttgatgtagttgaggtagaatcaaacacagagctgggatggaag
gttccagaatctcatcatcccagtgtgtgaatcttttcagggctgacttt
ctcttctttcatcctgtagtatacaaaacttaaaagcaacatatagttct
gcacacagattggtcaatgaagatcaataaaaaaagatgactgcctttcc
tcaggtttgttttatcacataatcaaactgcaatataactttgtatactt
gccctcataaaggaatgtatgtaataacaagttatgagaaatttgttccc
aataaatgttattgggtctgtatagacattttagtctcagccagttctcc
atatacagagacataaacatcaccacatatacatcacctattttgttaat
tgtgttagcctcccttttcttctctgtcaccaaggtcttcaagaagtctc
cctttgtcatgtctgatttttgtcaactttgaaggaaaccacaggtgtgg
aaacacaggcagaacccctcccccagcataacacatttcacattcacatt
ctgatatcagaatacccttaatataaaaaggatgctttattaaaaaataa
aaaaactaaaaaaatttttaaaaaatgatgctttagttcaacagcagttc
gttccacaatgcaatgtctttcagcagctgtggtgttttgttcattgaca
ttttaaaaatttaaggttaataaaacactatgtaatctatctttgggagg
ttctcgttgatcctttttgcctactaagcatctcctttagagttcgatag
atctctccacacttgctgtctgtgtgatatgcctgtaacatgttttatat
atatatcagaatactgcttcattcttattagagaatatatgctggaccat
tgtctggttttattgcgtgggcattccaatacttccatactcttaccagt
gtgtgtattacaggaagtcagccctttcttctgagcacgcgccataagat
tgc
gaattcttgaaacagggaacataaagggccccatgccacaatatattttc
tgtgagacaaagactttataagacctcatacacaaagggagagtgaggat
aaattcttcagtattaaggaagaatgtgatgaggcaacaattatgctata
agtgccagggaatttaagaataggcatcacataatctaatctcaggaatg
atgcaaacatttcaagtaaaaccataatataaaatatctatcttatgtat
tttcatgtatattgtttctgtctctttcatttggttttgctctctataga
tcatagattatttctccttgattttttttttttttggttataaaagctga
tttaaggactgtccagttttaatcaataatttatggactgatgaagaatt
actcaaggatgtaacttgctaggtccttacttctatacttcttcatctgg
tgaagttaagttctctctactgaacctttttcatagagctcttccttctt
catcacaatcttatcttatgctcccttacagaatttatttactccagtct
tctctaatcataacagtaaccttctgtgaatctattttttaattaacttt
attttattaacaagactgataattatggataattataactggtcatgatt
tctttctttttttaattaattaatttatttttttacactctatgttttat
tcctcgcccccgtctctaccctgacagttctacaacccattcctcctctc
cacctaactgtctccatgtgggtgtccccatcccacaccccacctgtctt
ctaaactatctggggcctccagtgtcttgaaaggttaggtgaatcatctc
tgaataaagacagacccggcagtcgtctattctatgtgttggggggcctc
atatcagctggagtagatacctgtttggtggtccatgttttagatatctt
ggagtccaggttaatgagactgctgtcctcctacaggatgcccttcttct
cagcttctttcagcttccctaatcaacattaggggtcactgcttatgatc
attagttgatggcaatatctggcatctggattcttcagccggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_34596269_34597368
seq2: B6Ng01-315A14.g_67_1160

seq1  GAATTCTTGAAACAGGGAACATAAAGGGCCCCATGCCACAATATATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAAACAGGGAACATAAAGGGCCCCATGCCACAATATATTTTC  50

seq1  TGTGAGACAAAGACTTTATAAGACCTCATACACAAAGGGAGAGTGAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACAAAGACTTTATAAGACCTCATACACAAAGGGAGAGTGAGGAT  100

seq1  AAATTCTTCAGTATTAAGGAAGAATGTGATGAGGCAACAATTATGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTCAGTATTAAGGAAGAATGTGATGAGGCAACAATTATGCTATA  150

seq1  AGTGCCAGGGAATTTAAGAATAGGCATCACATAATCTAATCTCAGGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGGGAATTTAAGAATAGGCATCACATAATCTAATCTCAGGAATG  200

seq1  ATGCAAACATTTCAAGTAAAACCATAATATAAAATATCTATCTTATGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACATTTCAAGTAAAACCATAATATAAAATATCTATCTTATGTAT  250

seq1  TTTCATGTATATTGTTTCTGTCTCTTTCATTTGGTTTTGCTCTCTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTATATTGTTTCTGTCTCTTTCATTTGGTTTTGCTCTCTATAGA  300

seq1  TCATAGATTATTTCTCCTTGATTTTTTTTTTTTTTGGTTATAAAAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATTATTTCTCCTTGATTTTTTTTTTTTTTGGTTATAAAAGCTGA  350

seq1  TTTAAGGACTGTCCAGTTTTAATCAATAATTTATGGACTGATGAAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGACTGTCCAGTTTTAATCAATAATTTATGGACTGATGAAGAATT  400

seq1  ACTCAAGGATGTAACTTGCTAGGTCCTTACTTCTATACTTCTTCATCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGATGTAACTTGCTAGGTCCTTACTTCTATACTTCTTCATCTGG  450

seq1  TGAAGTTAAGTTCTCTCTACTGAACCTTTTTCATAGAGCTCTTCCTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTAAGTTCTCTCTACTGAACCTTTTTCATAGAGCTCTTCCTTCTT  500

seq1  CATCACAATCTTATCTTATGCTCCCTTACAGAATTTATTTACTCCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAATCTTATCTTATGCTCCCTTACAGAATTTATTTACTCCAGTCT  550

seq1  TCTCTAATCATAACAGTAACCTTCTGTGAATCTATTTTTTAATTAACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATCATAACAGTAACCTTCTGTGAATCTATTTTTTAATTAACTTT  600

seq1  ATTTTATTAACAAGACTGATAATTATGGATAATTATAACTGGTCATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTAACAAGACTGATAATTATGGATAATTATAACTGGTCATGATT  650

seq1  TCTTTCTTTTTTTAATTAATTAATTTATTTTTTTACACTCTATGTTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTTTTAATTAATTAATTTATTTTTTTACACTCTATGTTTTAT  700

seq1  TCCTCGCCCCCGTCTCTACCCTGACAGTTCTACAACCCATTCCTCCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGCCCCCGTCTCTACCCTGACAGTTCTACAACCCATTCCTCCTCTC  750

seq1  CACCTAACTGTCTCCATGTGGGTGTCCCCATCCCACACCCCACCTGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACTGTCTCCATGTGGGTGTCCCCATCCCACACCCCACCTGTCTT  800

seq1  CTAAACTATCTGGGGCCTCCAGTGTCTTG-AAGGTTAGGTGAATCATCTC  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTAAACTATCTGGGGCCTCCAGTGTCTTGAAAGGTTAGGTGAATCATCTC  850

seq1  TGAATAAAGACAGACCCGGCAGTCGTCTATTCTATGTGTT-GGGGGCCTC  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAATAAAGACAGACCCGGCAGTCGTCTATTCTATGTGTTGGGGGGCCTC  900

seq1  ATATCAGCTGGAGTAAGATACCTGTTTGGTGGTCCAATGTTTTAGATATC  948
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  ATATCAGCTGGAGT-AGATACCTGTTTGGTGGTCC-ATGTTTTAGATATC  948

seq1  TTGGAGGTCCAGGTTAATTGAGACTGCTGGTCCTCCTACAGGATTGCCCT  998
      ||||| ||||||||||| |||||||||| |||||||||||||| ||||||
seq2  TTGGA-GTCCAGGTTAA-TGAGACTGCT-GTCCTCCTACAGGA-TGCCCT  994

seq1  TCTTCTCAGCTTCTTTCAGCTTTCCCTAATTCAACATTAGGGGTCAACTG  1048
      |||||||||||||||||||| |||||||| ||||||||||||||| ||||
seq2  TCTTCTCAGCTTCTTTCAGC-TTCCCTAA-TCAACATTAGGGGTC-ACTG  1041

seq1  CTTATGATCATTAGTTGAGTGCAAATATCT-GCATCT-GATTCTTTCAG-  1095
      |||||||||||||||||| ||  ||||||| |||||| ||||| ||||| 
seq2  CTTATGATCATTAGTTGA-TGGCAATATCTGGCATCTGGATTC-TTCAGC  1089

seq1  CGGCT  1100
      |||||
seq2  CGGCT  1094