BAC Information

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BAC

Clone NameB6Ng01-315J08
Chromosome10 (Build37)
Map Location 97,963,096 - 97,964,226
singlet/doubletsinglet
Overlap genenone
Upstream geneDcn, Lum, Kera, Epyc, 4921510H08Rik, EG667438
Downstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315J08.bB6Ng01-315J08.g
ACCGA106195GA106196
length2781,129
definitionB6Ng01-315J08.b B6Ng01-315J08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagaggaaaaccaacagaaacaactaaccattgggggctcgcagagactg
aattatcaagcaatgattaagcgtgggctggaaccaggctctttgcatat
atgttgtagatgtgcaccttggtcttcatgtgggtcccccaacaactggg
gtgaaagctgtccctgaatctgttgcctgcctgcttgtggatcctgttgc
cctaactgttgccttggctgacctcagtagaagatgagcctattcctgca
gtaacttgatgtgtgtgtgtgttggggg
gaattcacattgatttttcctaggcagaagagaagctatatacattggat
catgtgctattgaaaaacctcatctttggcttaggaggttgctcagaagg
aaagaatgattgctgccataagcatgaggtcctgtatttaaatatattat
tcacaatatctatgcacatataaacacacatagacacagacacacaaaca
cagagacatacacatatatatacaagcacacacagatacaaacacaaata
cacacacttacaaacactcaagcacacatatgcacacatacacacatgca
cacaacacacacacacacacacacacacacacacacacacacacacacat
tcacacccatctcatttagcccaggataaccttgatctcgagatatagct
cactatgtagttgagtctttgaacatctgatcatttggccttctcccttt
tgattgctaggattgttggcatgttccactatgcccagtttttaacaaga
tcctgtgcctgtatgtcttaaggtagtaacccaagtaggaaggaagacaa
gaatatttgagaggatttatttcaaatggtaaagatgggattagaccgta
atggtaaaatgggcagaattaaatgaactaggtaatgtgcgtacatagca
gtgtgcagtagataggcattgttaaaatgatcattttgcttgaactttat
attatagtaaagccatgaagtcattgaaacaatttgggagtgaaaatggg
aagtagcacaaggtgtaatgactattttgatagtccttgtctttgagtag
aaatactttcatgggggtcaagaaatgaaagaagaaatgtgtgttgatcg
tatcagaatcacatgtcttggtgtggttttgttggaaagttaaaaaaagt
ataaagaatactcatcacttcaagtcacttgctcctctcccctgtgaagt
ccctcaaatccaatgacacattactcagaggagagagagggattgagcat
ccattgtggggagaaactgcctgaaaatgatgcgcctccttagtttggga
acctcccatgttatggaatacctcgaagttgttgacagccaggccattca
gaatagacctttgtagatcattcccagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97963096_97964226
seq2: B6Ng01-315J08.g_67_1195 (reverse)

seq1  GACTGGGAAATGATTCCTACAAAGTGTTCCCTATTCTG-ATGG-CTGGCT  48
      ||||||| ||||||  |||||||| ||   |||||||| |||| ||||||
seq2  GACTGGG-AATGAT--CTACAAAG-GT---CTATTCTGAATGGCCTGGCT  43

seq1  GTCAACAACCTCCGAGTATTTCCAT-ACAT-GGAGTTTCCC-AACTAAGG  95
      |||||||| || ||||   |||||| |||| |||| ||||| ||||||||
seq2  GTCAACAA-CTTCGAGGTATTCCATAACATGGGAGGTTCCCAAACTAAGG  92

seq1  A-GCGCATTCATTTTCA-GCAGTTTCT-CCCAC-ATGGATGCTCAAATCC  141
      | ||||| ||||||||| ||||||||| ||||| |||||||||| |||||
seq2  AGGCGCA-TCATTTTCAGGCAGTTTCTCCCCACAATGGATGCTC-AATCC  140

seq1  CTCTCTTCTCCTCTGAGTAATGTGTCATTTGGATTTTGAGGGACTTCACA  191
      ||||| ||||||||||||||||||||| ||||| ||||||||||||||||
seq2  CTCTC-TCTCCTCTGAGTAATGTGTCA-TTGGA-TTTGAGGGACTTCACA  187

seq1  GGGGAGA-GAGCAAGTGACTTGAAGTGATGAGTATTCTTTATACTTTTTT  240
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGGAGCAAGTGACTTGAAGTGATGAGTATTCTTTATACTTTTTT  237

seq1  TAACTTTCCAACAAAACCACACCAAGACATGTGATTCTGATACGATCAAC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCCAACAAAACCACACCAAGACATGTGATTCTGATACGATCAAC  287

seq1  ACACATTTCTTCTTTCATTTCTTGA-CCCCATGAAAGTATTTCTACTCAA  339
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACACATTTCTTCTTTCATTTCTTGACCCCCATGAAAGTATTTCTACTCAA  337

seq1  AGACAAGGACTATCAAAATAGTCATTACACCTTGTGCTACTTCCCATTTT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGACTATCAAAATAGTCATTACACCTTGTGCTACTTCCCATTTT  387

seq1  CACTCCCAAATTGTTTCAATGACTTCATGGCTTTACTATAATATAAAGTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCAAATTGTTTCAATGACTTCATGGCTTTACTATAATATAAAGTT  437

seq1  CAAGCAAAATGATCATTTTAACAATGCCTATCTACTGCACACTGCTATGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAATGATCATTTTAACAATGCCTATCTACTGCACACTGCTATGT  487

seq1  ACGCACATTACCTAGTTCATTTAATTCTGCCCATTTTACCATTACGGTCT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACATTACCTAGTTCATTTAATTCTGCCCATTTTACCATTACGGTCT  537

seq1  AATCCCATCTTTACCATTTGAAATAAATCCTCTCAAATATTCTTGTCTTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATCTTTACCATTTGAAATAAATCCTCTCAAATATTCTTGTCTTC  587

seq1  CTTCCTACTTGGGTTACTACCTTAAGACATACAGGCACAGGATCTTGTTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTACTTGGGTTACTACCTTAAGACATACAGGCACAGGATCTTGTTA  637

seq1  AAAACTGGGCATAGTGGAACATGCCAACAATCCTAGCAATCAAAAGGGAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGGCATAGTGGAACATGCCAACAATCCTAGCAATCAAAAGGGAG  687

seq1  AAGGCCAAATGATCAGATGTTCAAAGACTCAACTACATAGTGAGCTATAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAATGATCAGATGTTCAAAGACTCAACTACATAGTGAGCTATAT  737

seq1  CTCGAGATCAAGGTTATCCTGGGCTAAATGAGATGGGTGTGAATGTGTGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGATCAAGGTTATCCTGGGCTAAATGAGATGGGTGTGAATGTGTGT  787

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGCATGTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGCATGTG  837

seq1  TGTATGTGTGCATATGTGTGCTTGAGTGTTTGTAAGTGTGTGTATTTGTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGCATATGTGTGCTTGAGTGTTTGTAAGTGTGTGTATTTGTG  887

seq1  TTTGTATCTGTGTGTGCTTGTATATATATGTGTATGTCTCTGTGTTTGTG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCTGTGTGTGCTTGTATATATATGTGTATGTCTCTGTGTTTGTG  937

seq1  TGTCTGTGTCTATGTGTGTTTATATGTGCATAGATATTGTGAATAATATA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTCTATGTGTGTTTATATGTGCATAGATATTGTGAATAATATA  987

seq1  TTTAAATACAGGACCTCATGCTTATGGCAGCAATCATTCTTTCCTTCTGA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACAGGACCTCATGCTTATGGCAGCAATCATTCTTTCCTTCTGA  1037

seq1  GCAACCTCCTAAGCCAAAGATGAGGTTTTTCAATAGCACATGATCCAATG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCCTAAGCCAAAGATGAGGTTTTTCAATAGCACATGATCCAATG  1087

seq1  TATATAGCTTCTCTTCTGCCTAGGAAAAATCAATGTGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGCTTCTCTTCTGCCTAGGAAAAATCAATGTGAATTC  1129