BAC Information

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BAC

Clone NameB6Ng01-315O14
Chromosome10 (Build37)
Map Location 26,772,058 - 26,844,305
singlet/doubletdoublet
Overlap geneLama2
Upstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315O14.bB6Ng01-315O14.g
ACCGA106437GA106438
length1,1231,121
definitionB6Ng01-315O14.b B6Ng01-315O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,772,058 - 26,773,181)(26,843,181 - 26,844,305)
sequence
gaattctaacttgttagttgctcagcttgctttcctgtcaattttatttt
ccttgcactctccaatgtctcaaagctgtgttcttcagtgcgtctatagt
catgtaattcttctgtaatattttccacaaaggccagcctcaatcatgtt
cattagagtttgatgtgtttgattttcttttttttttaaattatcattct
tcctacttgtttgtagtactatgaagttcacgtcaaattatgaaatgttt
aagagacaccatttttatagttaaatgagttactcatttatttaggacta
attttatttcaaggagagttgcttagaaccaatttaattaattaatttaa
ttaggagaatgattactttgatggaggaagagaaaacctttggggtgatg
ataacatgatctattttagctactttaactcatgtgcggggaagtcgttc
atgccccttggctgaatttgtcctatcatggacatggtaatttatctcaa
tctggtgaaaaagtcagttttacacttttatgtgtataagattaaatatt
atactaggtttccatagcactatcaaaacattttatactgaatacaccca
cataatagtcatattggcagaagattctttttatatacattaattggtga
tcatgtaaagagtagctatgcagtgcttaaagcagtcccaatatatggtc
acatgcaaaactgactttgcaataagcagaagaaagcagaagttactgaa
aagcatacagatgaaggtatacatactgatttctgcaggtaatttcatag
ggaagtaaaacaaaaagaaattagaaaattcatgaggaagatattttcta
caggtattataaagtatcataaaagtgatacttttgaatagatactcttt
acaaatacacttcattttaattcacataagtatttcagataaaagcacac
aaatatgggtcaactaacattggcatgaaaaacattttaattaagaaaaa
agaaaaaaaaagctcctttagcagactgtttaacactgacgaaatgtgct
agataaaaagatatattggatatattttgcagtagattgtttctttttgg
agtgtacagttaatacataaaca
gaattcattaaagggcttgtccaggatgctgaaggtatcaaaaaaaatca
tattttaacttttttctcttacataaaaattaaaagaagggattaaaggg
atttgaataggccctataaggaggtgtcatttctaaattcaagttgtaag
tgtagaatgcattttgtttgacatattcagggtcatgattagcagaaatc
tatagcctatcgcattaagtgagcaacgacagttgatgaaataatgatta
tgggtgtaaaataggaatgaattctaggatgtttaaataagtcattgaaa
acatatggctttgctatttttctgaccatagctattgaaaattgattcat
cttttctttttaaaagttagttttaccattctatttggtacacaaacact
gttctttcatttcttaaaatggttctttaagtacttggtatgagttgcaa
gagaacatctggtgcttggatttggctacccgagttcaccagaggctccc
tggcattttgtccgtagttcgctaggaattagttcttggcatctcccaat
gtggctgagaactgaaatgtaagtcacttctttgggcaaaagcccagact
aagaagccctcggctctccagtctcttgaaataaatgttaaatatgcata
catgttcagaagtttcaaaaagtggcttttccgtgtctctaaacatcttt
aaaaatgtgtgaagttaaacatctttattattctactttattgttctaga
tgtttgctttctttttggtaatatggaaaaatagaggggaaacgaactag
atttcacagtagagtctaactggtggtctatcattggtaatgcctgactc
cccactgtatggagtagcagtgttttcagataaggttgttctttttaaca
taacaagttacttcatctagaaaagcatctcagttaatctcacaataatg
cattcctctgatccatgaaaccgctgtgtgttccctggcattattttcca
ctgatgctatttgaaaatgcccccaaacaacaaatgtatgtcagagagtg
ttccctcctggtagatctctggagaaacttttctcatcttctttctgaag
tctcagcctcaacaccgttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26772058_26773181
seq2: B6Ng01-315O14.b_50_1172

seq1  GAATTCTAACTTGTTAGTTGCTCAGCTTGCTTTCCTGTCAATTTTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTTGTTAGTTGCTCAGCTTGCTTTCCTGTCAATTTTATTTT  50

seq1  CCTTGCACTCTCCAATGTCTCAAAGCTGTGTTCTTCAGTGCGTCTATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCACTCTCCAATGTCTCAAAGCTGTGTTCTTCAGTGCGTCTATAGT  100

seq1  CATGTAATTCTTCTGTAATATTTTCCACAAAGGCCAGCCTCAATCATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATTCTTCTGTAATATTTTCCACAAAGGCCAGCCTCAATCATGTT  150

seq1  CATTAGAGTTTGATGTGTTTGATTTTCTTTTTTTTTTAAATTATCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAGTTTGATGTGTTTGATTTTCTTTTTTTTTTAAATTATCATTCT  200

seq1  TCCTACTTGTTTGTAGTACTATGAAGTTCACGTCAAATTATGAAATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTGTTTGTAGTACTATGAAGTTCACGTCAAATTATGAAATGTTT  250

seq1  AAGAGACACCATTTTTATAGTTAAATGAGTTACTCATTTATTTAGGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACACCATTTTTATAGTTAAATGAGTTACTCATTTATTTAGGACTA  300

seq1  ATTTTATTTCAAGGAGAGTTGCTTAGAACCAATTTAATTAATTAATTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCAAGGAGAGTTGCTTAGAACCAATTTAATTAATTAATTTAA  350

seq1  TTAGGAGAATGATTACTTTGATGGAGGAAGAGAAAACCTTTGGGGTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAATGATTACTTTGATGGAGGAAGAGAAAACCTTTGGGGTGATG  400

seq1  ATAACATGATCTATTTTAGCTACTTTAACTCATGTGCGGGGAAGTCGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATGATCTATTTTAGCTACTTTAACTCATGTGCGGGGAAGTCGTTC  450

seq1  ATGCCCCTTGGCTGAATTTGTCCTATCATGGACATGGTAATTTATCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTTGGCTGAATTTGTCCTATCATGGACATGGTAATTTATCTCAA  500

seq1  TCTGGTGAAAAAGTCAGTTTTACACTTTTATGTGTATAAGATTAAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGAAAAAGTCAGTTTTACACTTTTATGTGTATAAGATTAAATATT  550

seq1  ATACTAGGTTTCCATAGCACTATCAAAACATTTTATACTGAATACACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGGTTTCCATAGCACTATCAAAACATTTTATACTGAATACACCCA  600

seq1  CATAATAGTCATATTGGCAGAAGATTCTTTTTATATACATTAATTGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGTCATATTGGCAGAAGATTCTTTTTATATACATTAATTGGTGA  650

seq1  TCATGTAAAGAGTAGCTATGCAGTGCTTAAAGCAGTCCCAATATATGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAAGAGTAGCTATGCAGTGCTTAAAGCAGTCCCAATATATGGTC  700

seq1  ACATGCAAAACTGACTTTGCAATAAGCAGAAGAAAGCAGAAGTTACTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAAAACTGACTTTGCAATAAGCAGAAGAAAGCAGAAGTTACTGAA  750

seq1  AAGCATACAGATGAAGGTATACATACTGATTTCTGCAGGTAATTTCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATACAGATGAAGGTATACATACTGATTTCTGCAGGTAATTTCATAG  800

seq1  GGAAGTAAAACAAAAAGAAATTAGAAAATTCATGAGGAAGATATTTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAAACAAAAAGAAATTAGAAAATTCATGAGGAAGATATTTTCTA  850

seq1  CAGGTATTATAAAGTATCATAAAAGTGATACTTTTGAATAGATACTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATTATAAAGTATCATAAAAGTGATACTTTTGAATAGATACTCTTT  900

seq1  ACAAATACACTTCATTTTAATTCACATAAGTATTTCAGATAAAAGCACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACACTTCATTTTAATTCACATAAGTATTTCAGATAAAAGCACAC  950

seq1  AAAATAT-GGTCAACTAACATT-GCATGAAAAACATTTTAATTAAGAAAA  998
       |||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  -AAATATGGGTCAACTAACATTGGCATGAAAAACATTTTAATTAAGAAAA  999

seq1  A--GAAAAAAAAGC-CCTTTAGCAGACTGTTT-ACACTGAAGGAAATGTT  1044
      |   |||||||||| ||||||||||||||||| |||||| | |||||| |
seq2  AAGAAAAAAAAAGCTCCTTTAGCAGACTGTTTAACACTG-ACGAAATG-T  1047

seq1  GCTAAGATAAAAAGATAATATTGGATTAATATTTTGCAGTAGA-TGTTTC  1093
      ||| |||||||||||| |||||||||  ||||||||||||||| ||||||
seq2  GCT-AGATAAAAAGAT-ATATTGGAT--ATATTTTGCAGTAGATTGTTTC  1093

seq1  TTTTTTGGAGTGTACAGTT-ATACAATAAACA  1124
       |||||||||||||||||| |||| |||||||
seq2  -TTTTTGGAGTGTACAGTTAATAC-ATAAACA  1123

seq1: chr10_26843181_26844305
seq2: B6Ng01-315O14.g_68_1188 (reverse)

seq1  GGAA-GGTGTTGAGTGTTGAGACTTCAGAAAGAAGATGAGAAAAGTTTCT  49
      |||| ||||||||| | |||||||||||||||||||||||||||||||| 
seq2  GGAACGGTGTTGAG-GCTGAGACTTCAGAAAGAAGATGAGAAAAGTTTC-  48

seq1  TCCAGAGATCTACCAGGAGGGAAACAACTCTCTGACATACATTTGTTGTT  99
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  TCCAGAGATCTACCAGGAGGGAA--CACTCTCTGACATACATTTGTTGTT  96

seq1  TGGGGGCATTTTCAAATAGCATCAGTGGAAAATAATGCCAGGGAACACAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCATTTTCAAATAGCATCAGTGGAAAATAATGCCAGGGAACACAC  146

seq1  AGCGGTTTCATGGATCAGAGGAATGCATTATTGTGAGATTAACTGAGATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTTTCATGGATCAGAGGAATGCATTATTGTGAGATTAACTGAGATG  196

seq1  CTTTTCTAGATGAAGTAACTTGTTATGTTAAAAAAGAACAACCTTATCTG  249
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTTTCTAGATGAAGTAACTTGTTATGTT-AAAAAGAACAACCTTATCTG  245

seq1  AAAACACTGCTACTCCATACAGTGGGGAGTCAGGCATTACCAATGATAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGCTACTCCATACAGTGGGGAGTCAGGCATTACCAATGATAGA  295

seq1  CCACCAGTTAGACTCTACTGTGAAATCTAGTTCGTTTCCCCTCTATTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGTTAGACTCTACTGTGAAATCTAGTTCGTTTCCCCTCTATTTTT  345

seq1  CCATATTACCAAAAAGAAAGCAAACATCTAGAACAATAAAGTAGAATAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTACCAAAAAGAAAGCAAACATCTAGAACAATAAAGTAGAATAAT  395

seq1  AAAGATGTTTAACTTCACACATTTTTAAAGATGTTTAGAGACACGGAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTTAACTTCACACATTTTTAAAGATGTTTAGAGACACGGAAAA  445

seq1  GCCACTTTTTGAAACTTCTGAACATGTATGCATATTTAACATTTATTTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTTTGAAACTTCTGAACATGTATGCATATTTAACATTTATTTCA  495

seq1  AGAGACTGGAGAGCCGAGGGCTTCTTAGTCTGGGCTTTTGCCCAAAGAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGGAGAGCCGAGGGCTTCTTAGTCTGGGCTTTTGCCCAAAGAAG  545

seq1  TGACTTACATTTCAGTTCTCAGCCACATTGGGAGATGCCAAGAACTAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTACATTTCAGTTCTCAGCCACATTGGGAGATGCCAAGAACTAATT  595

seq1  CCTAGCGAACTACGGACAAAATGCCAGGGAGCCTCTGGTGAACTCGGGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCGAACTACGGACAAAATGCCAGGGAGCCTCTGGTGAACTCGGGTA  645

seq1  GCCAAATCCAAGCACCAGATGTTCTCTTGCAACTCATACCAAGTACTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATCCAAGCACCAGATGTTCTCTTGCAACTCATACCAAGTACTTAA  695

seq1  AGAACCATTTTAAGAAATGAAAGAACAGTGTTTGTGTACCAAATAGAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATTTTAAGAAATGAAAGAACAGTGTTTGTGTACCAAATAGAATG  745

seq1  GTAAAACTAACTTTTAAAAAGAAAAGATGAATCAATTTTCAATAGCTATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTAACTTTTAAAAAGAAAAGATGAATCAATTTTCAATAGCTATG  795

seq1  GTCAGAAAAATAGCAAAGCCATATGTTTTCAATGACTTATTTAAACATCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAAATAGCAAAGCCATATGTTTTCAATGACTTATTTAAACATCC  845

seq1  TAGAATTCATTCCTATTTTACACCCATAATCATTATTTCATCAACTGTCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCATTCCTATTTTACACCCATAATCATTATTTCATCAACTGTCG  895

seq1  TTGCTCACTTAATGCGATAGGCTATAGATTTCTGCTAATCATGACCCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCACTTAATGCGATAGGCTATAGATTTCTGCTAATCATGACCCTGA  945

seq1  ATATGTCAAACAAAATGCATTCTACACTTACAACTTGAATTTAGAAATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCAAACAAAATGCATTCTACACTTACAACTTGAATTTAGAAATGA  995

seq1  CACCTCCTTATAGGGCCTATTCAAATCCCTTTAATCCCTTCTTTTAATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTTATAGGGCCTATTCAAATCCCTTTAATCCCTTCTTTTAATTT  1045

seq1  TTATGTAAGAGAAAAAAGTTAAAATATGATTTTTTTTGATACCTTCAGCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAGAGAAAAAAGTTAAAATATGATTTTTTTTGATACCTTCAGCA  1095

seq1  TCCTGGACAAGCCCTTTAATGAATTC  1125
      ||||||||||||||||||||||||||
seq2  TCCTGGACAAGCCCTTTAATGAATTC  1121