BAC Information

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BAC

Clone NameB6Ng01-315P18
Chromosome10 (Build37)
Map Location 123,105,298 - 123,240,740
singlet/doubletdoublet
Overlap geneAI851790
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958
Downstream gene4930503E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315P18.bB6Ng01-315P18.g
ACCGA106493GA106494
length6301,140
definitionB6Ng01-315P18.b B6Ng01-315P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,105,298 - 123,105,926)(123,239,608 - 123,240,740)
sequence
gaattcttttgctcctaagtgcttttgtcagagtaattcatcatagcagc
agcaaaagaaacaaagaacatatacttgaggcttcataggttttacagat
gtagaaaatgatttttttttcttttcttaggctcatcagcttactggaca
ttctactttcctcctcctcctcctcctccacctcctcctcctcctcctct
tcttctttttcttcctcttcctcttcctcttcctcatcctcttcctcttc
ctcttcctcttcttcttcttcttcttcttcttcttcttcttcttcctctt
cttcttcgtcttcttcttcctctcctccttctttcgtctataaaatacag
agaccaaaagcaacttggggagtagatggctaattttttcttacacttcc
aggtcacattacatcattcaggaacattatggcaggactgaaaggcagga
acctggagcacaaactgaagggatgcagcttggtggctcacttcttggct
ggctcatagccttgtgcttttttatgttccttatgcaactcgggactact
tcataggatggcactgcctacagtgtgctaaaaccgctgtattgatttgt
actcaaagacaatctctaacagatcaggag
gaattcaccaattttgtctagttgagtctcagcactacccttataccaag
aaagaagaggaggtgctttggagttctgttatgctgagtcctttcctgac
tgagactggaataggctcttccattgaggcaacacttgcaggaaatgggt
ctggggtccctttatctagctgatgacagaggtctgtctgtaaattcagc
cttctaccattgtgccaggacacaatcgcttctgaacttcaaactccagg
atcaagcagttgaggtagatttaaaaaacaatatcaagcacacatacaac
acacacatacatgcacttgacacacatacactcatatacaccaaaatgca
catgcacccatacacacacatacccacatgtacaaatacaaatgcacagg
tatacacatatacatatacccatatacacaaacacatcgagacacacaga
cacacaaatgcatatgtacacatatacacatatatatacacatatacaaa
cacacatacacatatgcttgtacacacatacactcactaatgcacgtgta
cacatatacacacaaatatacaaacaggagcccacacatattcccacaac
gttttacaattttgtgttgggttgaatgtagtccacatactgcaggttaa
acatgcagggattctgctaggaaaagagctttttaccccgcttccatcct
cctctgcctcttcttcctccatccttctttctcactttctctgctctatc
catcctaagttaaaatcaacacttcattttctaaaacatactttgtaaga
aattaaatgcaatgtgtttcctggtaacatgacaggcactttctcctgcc
taacctctaaatagcctttaatatgaagaaacctaaaagggccaggctct
tgcatggaaagaagagaaggagaaaaatcagaagagggaataaaaatgga
ataaaattaactaatataaaacaatgacattgcagctagaacttgtgtta
aaaatagtgtgtcaatatacatcatgggagagatgagctctgaccttgta
ttatttctgcctgaaagatttacctggtaagccttcctctgtgccatgaa
acaaagccctaggtttcttgtgtgaaacctatctatcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123105298_123105926
seq2: B6Ng01-315P18.b_47_676

seq1  GAATTCTTTTGCTCCTAAGTGCTTTTGTCAGAGTAATTCATCATAGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCTCCTAAGTGCTTTTGTCAGAGTAATTCATCATAGCAGC  50

seq1  AGCAAAAGAAACAAAGAACATATACTTGAGGCTTCATAGGTTTTACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGAAACAAAGAACATATACTTGAGGCTTCATAGGTTTTACAGAT  100

seq1  GTAGAAAATGATTTTTTTTTCTTTTCTTAGGCTCATCAGCTTACTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAATGATTTTTTTTTCTTTTCTTAGGCTCATCAGCTTACTGGACA  150

seq1  TTCTACTTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCT  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTACTTTCCTCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCT  200

seq1  TCTTCTTTTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTC  250
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTTCTTTTTCTTCCTCTTCCTCTTCCTCTTCCTCATCCTCTTCCTCTTC  250

seq1  CTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTT  300

seq1  CTTCTTCTTCTTCTTCTTCCTCTCCTCCTTCTTTCGTCTATAAAATACAG  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCGTCTTCTTCTTCCTCTCCTCCTTCTTTCGTCTATAAAATACAG  350

seq1  TGACCAAAAGCAACTTGGGGAGTAGATGGCTAATTTTTTCTTACACTTCC  400
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAAAGCAACTTGGGGAGTAGATGGCTAATTTTTTCTTACACTTCC  400

seq1  AGGTCACATTACATCATTCAGGAACATCAGGGCAGGACTTCAAGGCAGGA  450
      ||||||||||||||||||||||||||| | |||||||||  |||||||||
seq2  AGGTCACATTACATCATTCAGGAACATTATGGCAGGACTGAAAGGCAGGA  450

seq1  ACCTGGAGCAGAAACTGAAGGGATGCAGCTTGGTGGCTCACTTCTTGGCT  500
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGCACAAACTGAAGGGATGCAGCTTGGTGGCTCACTTCTTGGCT  500

seq1  GGCTCACAGCCTTGTGCTTATCTAGGTTCCTTATGCAACCCGGGACTACT  550
      |||||| |||||||||||| | || |||||||||||||| ||||||||||
seq2  GGCTCATAGCCTTGTGCTTTTTTATGTTCCTTATGCAACTCGGGACTACT  550

seq1  TCATAGGATGGCACTGCCTACAGTGTGCTAAATCCTGCTGTATTGATTTG  600
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  TCATAGGATGGCACTGCCTACAGTGTGCTAAAACC-GCTGTATTGATTTG  599

seq1  TACTC-AAGACAATCTCCAACAGA-CAGGAG  629
      ||||| ||||||||||| |||||| ||||||
seq2  TACTCAAAGACAATCTCTAACAGATCAGGAG  630

seq1: chr10_123239608_123240740
seq2: B6Ng01-315P18.g_69_1208 (reverse)

seq1  TGTGGTAGATAGTT----CACAAGAAACCCTGGGCTTTGTTTCATGTGCA  46
      |||| ||||||| |    |||||||||||  ||||||||||||||| |||
seq2  TGTGATAGATAGGTTTCACACAAGAAACCTAGGGCTTTGTTTCATG-GCA  49

seq1  CAGAG---AGCT--ACAGTTAAATCTCTCAGGCAG-AATAATAC-AGGCC  89
      |||||    |||   ||| ||||||| |||||||| |||||||| ||| |
seq2  CAGAGGAAGGCTTACCAGGTAAATCTTTCAGGCAGAAATAATACAAGGTC  99

seq1  AGAGCCTCATCTCTCCCATGGTGTATAATTTGGCCACACTA-TTTTAACA  138
      |||| ||||||||||||||| ||||||   | | ||||||| ||||||||
seq2  AGAG-CTCATCTCTCCCATGATGTATA---TTGACACACTATTTTTAACA  145

seq1  CAAGTTCTAGCTGCAATGTCATTGTTTTATTATTAGTTTATTTTATTCCA  188
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  CAAGTTCTAGCTGCAATGTCATTGTTTTA-TATTAGTTAATTTTATTCCA  194

seq1  TTTTTATTCCCTCTTCCTGATTTTTCTCC-TCTCCTCTTTCCATGCAAGA  237
      ||||||||||||||| ||||||||||||| |||| |||||||||||||||
seq2  TTTTTATTCCCTCTT-CTGATTTTTCTCCTTCTCTTCTTTCCATGCAAGA  243

seq1  GCCTGGCCC-TTTAGGTTTCTTCATATTAAAGGCTATTTAGAGGTTAGGC  286
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCCCTTTTAGGTTTCTTCATATTAAAGGCTATTTAGAGGTTAGGC  293

seq1  AGGAGAAAGTGCCTGTCATGTTACCAGGAAACACATTGCATTTAATTTCT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAGTGCCTGTCATGTTACCAGGAAACACATTGCATTTAATTTCT  343

seq1  TACAAAGTATGTTTTAGAAAATGAAGTGTTGATTTTAACTTAGGATGGAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTATGTTTTAGAAAATGAAGTGTTGATTTTAACTTAGGATGGAT  393

seq1  AGAGCAGAGAAAGTGAGAAAGAAGGATGGAGGAAGAAGAGGCAGAGGAGG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGAAAGTGAGAAAGAAGGATGGAGGAAGAAGAGGCAGAGGAGG  443

seq1  ATGGAAGCGGGGTAAAAAGCTCTTTTCCTAGCAGAATCCCTGCATGTTTA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCGGGGTAAAAAGCTCTTTTCCTAGCAGAATCCCTGCATGTTTA  493

seq1  ACCTGCAGTATGTGGACTACATTCAACCCAACACAAAATTGTAAAACGTT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAGTATGTGGACTACATTCAACCCAACACAAAATTGTAAAACGTT  543

seq1  GTGGGAATATGTGTGGGCTCCTGTTTGTATATTTGTGTGTATATGTGTAC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAATATGTGTGGGCTCCTGTTTGTATATTTGTGTGTATATGTGTAC  593

seq1  ACGTGCATTAGTGAGTGTATGTGTGTACAAGCATATGTGTATGTGTGTTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATTAGTGAGTGTATGTGTGTACAAGCATATGTGTATGTGTGTTT  643

seq1  GTATATGTGTATATATATGTGTATATGTGTACATATGCATTTGTGTGTCT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTGTATATATATGTGTATATGTGTACATATGCATTTGTGTGTCT  693

seq1  GTGTGTCTCGATGTGTTTGTGTATATGGGTATATGTATATGTGTATACCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTCGATGTGTTTGTGTATATGGGTATATGTATATGTGTATACCT  743

seq1  GTGCATTTGTATTTGTACATGTGGGTATGTGTGTGTATGGGTGCATGTGC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTGTATTTGTACATGTGGGTATGTGTGTGTATGGGTGCATGTGC  793

seq1  ATTTTGGTGTATATGAGTGTATGTGTGTCAAGTGCATGTATGTGTGTGTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTGTATATGAGTGTATGTGTGTCAAGTGCATGTATGTGTGTGTT  843

seq1  GTATGTGTGCTTGATATTGTTTTTTAAATCTACCTCAACTGCTTGATCCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGCTTGATATTGTTTTTTAAATCTACCTCAACTGCTTGATCCT  893

seq1  GGAGTTTGAAGTTCAGAAGCGATTGTGTCCTGGCACAATGGTAGAAGGCT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGAAGTTCAGAAGCGATTGTGTCCTGGCACAATGGTAGAAGGCT  943

seq1  GAATTTACAGACAGACCTCTGTCATCAGCTAGATAAAGGGACCCCAGACC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACAGACAGACCTCTGTCATCAGCTAGATAAAGGGACCCCAGACC  993

seq1  CATTTCCTGCAAGTGTTGCCTCAATGGAAGAGCCTATTCCAGTCTCAGTC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTGCAAGTGTTGCCTCAATGGAAGAGCCTATTCCAGTCTCAGTC  1043

seq1  AGGAAAGGACTCAGCATAACAGAACTCCAAAGCACCTCCTCTTCTTTCTT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGACTCAGCATAACAGAACTCCAAAGCACCTCCTCTTCTTTCTT  1093

seq1  GGTATAAGGGTAGTGCTGAGACTCAACTAGACAAAATTGGTGAATTC  1133
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAGGGTAGTGCTGAGACTCAACTAGACAAAATTGGTGAATTC  1140