BAC Information

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BAC

Clone NameB6Ng01-316D22
Chromosome10 (Build37)
Map Location 26,533,465 - 26,534,637
singlet/doubletsinglet
Overlap geneArhgap18
Upstream geneLOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349
Downstream geneLama2, LOC100040385
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316D22.bB6Ng01-316D22.g
ACCGA106687GA106688
length1,1551,179
definitionB6Ng01-316D22.b B6Ng01-316D22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaatatctaccattcccttgtttgtgaagtgaaacagcagt
gcctatcttgcaaattgctaagagaattagaaaataatttacatcatagg
ccaaataacaggttgagcacagctaaatcaaatatccaaaaatctgaaac
acatgtgttaccaacatctcactttggggagcactctatacttgattagt
gatgaccaacctaaaagatctatgcaacccttcccaaacttaaaattttc
ctactcccagcctcaaatctggaatacatttggtccaaaagaaacctcag
ataaaggaaagcaacctggactatctcagaatattcaataaagtaagcca
ggcatggcagcacatgtctttaatcccagcacatggaagcagatgcaggt
ggctatctgtgaattgggaatccagcctggcttacagagggagttccagg
ataatcagagctacctagtaagaccctgtctcagaatataaaataagtta
aaataggaaaacaaatgaagtaaacaaaggtcatgattcaaacatgaaca
ccaaaccaaaccaaaaccagcaatgtaattgcttggaggccagggaggag
aagaagcctcacactgtgggtcaggagcatgtatttcctcatcgtcctct
ggggatgcgtttcctgagcctctctgagccaacagggaacaactgctgta
cagagcaaacaggaaaaaatatttaaaattatttgcatcaagatgttcac
aaaaaccagctttaaattcaatggttttgtaggcagctgtaactttagtg
ccttggttctccacagtgcacagggttactaaagttaggcaagatgcgtt
tcaataactctgggtccctgttacacataaatgaaacaacatggtttttt
gttgtttgtttcctgtttctttatgccacgcatttccttagtaattgttt
tgattttctcctcagatttttgctctccacttttcctagctgaagtgaag
gactattgacttggatttaccttaactcagtcaagaacaatttactggga
ccccagagctttaatcagaaccatcagttcaagggctttcgctcatctaa
atcaccctgtacaaatggaattacgtctaaaagtctaacatatagccttt
ttgga
gaattcacttattggcgtatgctatgatcctgatcaggtatttaaatggg
gaagagggcatgtttgtattttttttgtccagaatgcaggagcatgctag
ttgccagattgattggtgtgacatgctgacagaaaagggtaaaactgacc
tgtgagcttgctgagtgctctgacaatggtgtctggaaaactgtattcag
tatatgttcttgacccacctttgcttgcctatgtcccagattagacaaga
gcctggattcaagcttttagaccttgtggtacagagaacatggagactgt
ggaaactgaataagaaaaattaatcaaaaggaggagttataatgactctt
ctctttcctttaatgtaaccagttattctgactcaatcctggcctggttt
agaaataaatccaatattggagattccaattgtgaagatggataaaaaat
cattttcacccagcttacctggctcttaccactatttcctgagaagttta
ttctgttgattctcaaagccacctcccacacaccaagaggccagaccttg
ggtctgactcttgctaatttgcaactgaattgagtgcctgggacatcccc
gcagacaaccttaatcctatttgctcttaacttttgacttgtattttaag
cagatcggttggttacctccatacaggctcgccttcagcaaaactcagat
atggcagttagtcatcactatgaagaaatgcattgagtgcatatcatgtc
tttggtctgaatgggagaaaggtgtactatgagggccagcagtcaaggac
gggccactgatgaatctatgactcctataaacctaagacagagccatgtg
ccaaaaggccttgtttgttcataataaacactaaaaggctgtgtttgtgt
aaataaacataaacaaactatgtgtggcctctgagatgggtaagaggaca
tatagactcagtcccaagccagtgtggctaccacccaccaataatttcca
ggcagacgatgaagcataagtaattcttatgggccgagtccaataaattt
ttaacaaaataaaaggaagactgtgcccttcctcccagctttggacttgc
tgacagtctcaaacctgagccagcatctgcctaactacagttctatcttc
ctggccagaagaactgtgagaaaatacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26533465_26534637
seq2: B6Ng01-316D22.b_48_1202 (reverse)

seq1  TCCAAAAAAGCTATAATGTAGACTTTTTAACACTTATTCCATTTGTACAA  50
      |||||||| ||||||   |||||||||  ||  | ||||||||||||| |
seq2  TCCAAAAAGGCTATATGTTAGACTTTTAGAC-GTAATTCCATTTGTAC-A  48

seq1  GGGTGATTTTAGATGAAGGCGGAAAAGCCCTTGAAACCTGAT-GTTCTGA  99
      |||||| |||||||||  |||  ||||||||||||  ||||| |||||||
seq2  GGGTGA-TTTAGATGA--GCG--AAAGCCCTTGAA--CTGATGGTTCTGA  91

seq1  TTAAAGCTCTTGGGGGTCCCAGGTAAAATTGTTCTTGACTGAGGTTTAAG  149
      ||||||||||  ||||||||||   ||||||||||||||||||  |||||
seq2  TTAAAGCTCT--GGGGTCCCAG--TAAATTGTTCTTGACTGAG--TTAAG  135

seq1  GTAAATCCCAAGTCAAATAGTCCTTCACTTCAGCCTAGGAAAAGTGGAGA  199
      |||||| ||||||| |||||||||||||||||| ||||||||||||||||
seq2  GTAAAT-CCAAGTC-AATAGTCCTTCACTTCAG-CTAGGAAAAGTGGAGA  182

seq1  GCAAAAATCTGAGGAGAAAATCAAAACAAATTACTAAGGAAATGCGTGGC  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAAAAATCTGAGGAGAAAATCAAAAC-AATTACTAAGGAAATGCGTGGC  231

seq1  ATAAAGAAACAGGAAACAAACAACAAAAAACCATGTTGTTTCATTTATGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAACAGGAAACAAACAACAAAAAACCATGTTGTTTCATTTATGT  281

seq1  GTAACAGGGACCCAGAGTTATTGAAACGCATCTTGCCTAACTTTAGTAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGGGACCCAGAGTTATTGAAACGCATCTTGCCTAACTTTAGTAAC  331

seq1  CCTGTGCACTGTGGAGAACCAAGGCACTAAAGTTACAGCTGCCTACAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCACTGTGGAGAACCAAGGCACTAAAGTTACAGCTGCCTACAAAA  381

seq1  CCATTGAATTTAAAGCTGGTTTTTGTGAACATCTTGATGCAAATAATTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAATTTAAAGCTGGTTTTTGTGAACATCTTGATGCAAATAATTTT  431

seq1  AAATATTTTTTCCTGTTTGCTCTGTACAGCAGTTGTTCCCTGTTGGCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTTTCCTGTTTGCTCTGTACAGCAGTTGTTCCCTGTTGGCTCA  481

seq1  GAGAGGCTCAGGAAACGCATCCCCAGAGGACGATGAGGAAATACATGCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTCAGGAAACGCATCCCCAGAGGACGATGAGGAAATACATGCTC  531

seq1  CTGACCCACAGTGTGAGGCTTCTTCTCCTCCCTGGCCTCCAAGCAATTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCACAGTGTGAGGCTTCTTCTCCTCCCTGGCCTCCAAGCAATTAC  581

seq1  ATTGCTGGTTTTGGTTTGGTTTGGTGTTCATGTTTGAATCATGACCTTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTTTTGGTTTGGTTTGGTGTTCATGTTTGAATCATGACCTTTG  631

seq1  TTTACTTCATTTGTTTTCCTATTTTAACTTATTTTATATTCTGAGACAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCATTTGTTTTCCTATTTTAACTTATTTTATATTCTGAGACAGG  681

seq1  GTCTTACTAGGTAGCTCTGATTATCCTGGAACTCCCTCTGTAAGCCAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACTAGGTAGCTCTGATTATCCTGGAACTCCCTCTGTAAGCCAGGC  731

seq1  TGGATTCCCAATTCACAGATAGCCACCTGCATCTGCTTCCATGTGCTGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCCAATTCACAGATAGCCACCTGCATCTGCTTCCATGTGCTGGG  781

seq1  ATTAAAGACATGTGCTGCCATGCCTGGCTTACTTTATTGAATATTCTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGACATGTGCTGCCATGCCTGGCTTACTTTATTGAATATTCTGAG  831

seq1  ATAGTCCAGGTTGCTTTCCTTTATCTGAGGTTTCTTTTGGACCAAATGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAGGTTGCTTTCCTTTATCTGAGGTTTCTTTTGGACCAAATGTA  881

seq1  TTCCAGATTTGAGGCTGGGAGTAGGAAAATTTTAAGTTTGGGAAGGGTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATTTGAGGCTGGGAGTAGGAAAATTTTAAGTTTGGGAAGGGTTG  931

seq1  CATAGATCTTTTAGGTTGGTCATCACTAATCAAGTATAGAGTGCTCCCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCTTTTAGGTTGGTCATCACTAATCAAGTATAGAGTGCTCCCCA  981

seq1  AAGTGAGATGTTGGTAACACATGTGTTTCAGATTTTTGGATATTTGATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGATGTTGGTAACACATGTGTTTCAGATTTTTGGATATTTGATTT  1031

seq1  AGCTGTGCTCAACCTGTTATTTGGCCTATGATGTAAATTATTTTCTAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCTCAACCTGTTATTTGGCCTATGATGTAAATTATTTTCTAATT  1081

seq1  CTCTTAGCAATTTGCAAGATAGGCACTGCTGTTTCACTTCACAAACAAGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGCAATTTGCAAGATAGGCACTGCTGTTTCACTTCACAAACAAGG  1131

seq1  GAATGGTAGATATTCAAAGAATTC  1173
      ||||||||||||||||||||||||
seq2  GAATGGTAGATATTCAAAGAATTC  1155