BAC Information

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BAC

Clone NameB6Ng01-317F21
Chromosome10 (Build37)
Map Location 97,514,674 - 97,515,738
singlet/doubletsinglet
Overlap genenone
Upstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317F21.bB6Ng01-317F21.g
ACCGA107531GA107532
length1,2331,053
definitionB6Ng01-317F21.b B6Ng01-317F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcctatacctaaccatgataaaagcaatctactggtcgcca
tcttggttccgggacttagcagaacttaggaaattagtctgaacaggtta
gagggtgcgccagagaaccggacagcttctgggacgggcagaagcacaga
gccgctgaggcagcacacttggcgggccgcagacagccggccaccgtccg
gaccagaggacaggtgtccgcctggcttgggaggcagcctcagcctcagc
agcagcggttgccatctgggttccaggactccgccggacctaggaaatta
gtctgaacaggttagagggtgcgccagagaaccggacagcttctgggaca
ggcagaagcacagagcctctgaggcagtacactttgcaggctgcagacag
ccggccaccgtctggaccagaggacaggtgcccgcctggctcgggaggcg
gcctcagcctcaggagcagcggtcaccatcttggttccaggactccctgg
aacttaggaatttattctgcacaggtgagagtctgcaccacagaagctga
cagcttctgggaactgccaaagcaatacagcttctgagagaggccctgtt
ttgggccttcttcttcgaccaggaggaggtccaaaaacaagatatctgcg
caccttccctgtaagagagcttgccagcagagagtgctctgagcactgaa
actcagaggagagaatctgtctcccaggtctgctgagagactgtaacaga
atcaccagaagaacaatctctaaacagagtcaactataactactaactcc
agagattaccagatggcgaaaggtaaacgtagggaatcctactaacaggg
aaccaagaccactcaccatcatcagaacccagcactcccacttcgcccag
tccagggtaccccaacacacctgaaaacctagacctagatttaaaagcat
atctcatgatgatggtagaggacatcaagaaggactttaataaatcactt
aaagaaatacaggagaaacactgctaaagagttacaaggtccttaaagaa
aaacagggaaaacacatcaaacaggtagaagtccttacagaaaaaagagg
aaaaaacataccaaacagggtggatgggaatgaacaatcgaacttagacc
taaaaggaagttgaaacattaggaaactcaaggtgaggccacactgtggg
aatatgaaaaaccctctagtggggagagagaaa
gaattctctttttaaagaacatcttcattctgctcataaatttgtcatat
tgcattgcacaggcagaggcatggaacatatccattcaatttttgtgaga
caattaaataccaataacatatgtgacagtttgaatgagcataatctaca
taggctcatatattcacatacccagttggtgactgtttggaaggataaag
tatgcccttgtaggagtagatacttccttgttggaggagggatgttaatg
gcagacagttttgagattccaaaagttgaaatctttgtgccaggcccagt
attgttttctttctatctacttactgggaatcaggatgtagctctcagct
acttttccagaactatccatgtcttaatactgctaaggatatgttccctg
ccagatggtaatttactaaccttctgaaactataaaagagcacccaaatt
aatgctttcttttgtaagagttgcctttgtcatggtgtctcattgaaaca
acgcaatagtgactaagacaacacaaatagcataaaacttatgttatagt
gaaaagaattgtatttgtatgaaagtgcacaatatggggacaaatattca
aatttcagaatgagctttgaaagcacacacaccaacagtaaagtggtaat
cactcttctgaaatccattttcctgagctttggtatattggcagaataaa
aaattagtcaatataatttcagatgtcaacattgatcaaacaagatgagt
tgggttaggatagttcaccatgaacagttttacgatttatgtatataaaa
ttccaaaatggatttcagaataaattattgtttaaaataaactttcttat
tttcataaaaatataataccactctgggtgaaatgatctcatgtcatcac
tgatttgctgtcttccatgctctttttagcatccaccaacagacagggct
tggggatttttaacttttcttcttctaatgtagtaatttgagagagatag
ctcttttttatgtttttttcattttttattagtattagctcatttacaat
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97514674_97515738
seq2: B6Ng01-317F21.g_63_1115 (reverse)

seq1  GAAA-TGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAAAACATA  49
      |||| |||||||||||| |||| |||||||||||||   |||||||||||
seq2  GAAATTGTAAATGAGCT-AATA-CTAATAAAAAATG---AAAAAAACATA  45

seq1  AAAAAAAGAAGCTATCCTCTCTCAAATTACCTACCATTAAGAAGAAGAAA  99
      |||||    |||||| ||||||||||||| ||| |||| |||||||||||
seq2  AAAAA---GAGCTAT-CTCTCTCAAATTA-CTA-CATT-AGAAGAAGAAA  88

seq1  AGTTAAAAATCCCCAAGCCCCTGTCTGTTGGTGGATGCTAAAAAGAGCAT  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTTAAAAATCCCCAAG-CCCTGTCTGTTGGTGGATGCTAAAAAGAGCAT  137

seq1  GGAAGACAGCAAATCAGTGATGACATGAGATCATTTCACCCAGAGTGGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAGCAAATCAGTGATGACATGAGATCATTTCACCCAGAGTGGTA  187

seq1  TTATATTTTTATGAAAATAAGAAAGTTTATTTTAAACAATAATTTATTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTTATGAAAATAAGAAAGTTTATTTTAAACAATAATTTATTCT  237

seq1  GAAATCCATTTTGGAATTTTATATACATAAATCGTAAAACTGTTCATGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCATTTTGGAATTTTATATACATAAATCGTAAAACTGTTCATGGT  287

seq1  GAACTATCCTAACCCAACTCATCTTGTTTGATCAATGTTGACATCTGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATCCTAACCCAACTCATCTTGTTTGATCAATGTTGACATCTGAAA  337

seq1  TTATATTGACTAATTTTTTATTCTGCCAATATACCAAAGCTCAGGAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGACTAATTTTTTATTCTGCCAATATACCAAAGCTCAGGAAAAT  387

seq1  GGATTTCAGAAGAGTGATTACCACTTTACTGTTGGTGTGTGTGCTTTCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAGAAGAGTGATTACCACTTTACTGTTGGTGTGTGTGCTTTCAA  437

seq1  AGCTCATTCTGAAATTTGAATATTTGTCCCCATATTGTGCACTTTCATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTCTGAAATTTGAATATTTGTCCCCATATTGTGCACTTTCATAC  487

seq1  AAATACAATTCTTTTCACTATAACATAAGTTTTATGCTATTTGTGTTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATTCTTTTCACTATAACATAAGTTTTATGCTATTTGTGTTGTC  537

seq1  TTAGTCACTATTGCGTTGTTTCAATGAGACACCATGACAAAGGCAACTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCACTATTGCGTTGTTTCAATGAGACACCATGACAAAGGCAACTCT  587

seq1  TACAAAAGAAAGCATTAATTTGGGTGCTCTTTTATAGTTTCAGAAGGTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGAAAGCATTAATTTGGGTGCTCTTTTATAGTTTCAGAAGGTTA  637

seq1  GTAAATTACCATCTGGCAGGGAACATATCCTTAGCAGTATTAAGACATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTACCATCTGGCAGGGAACATATCCTTAGCAGTATTAAGACATGG  687

seq1  ATAGTTCTGGAAAAGTAGCTGAGAGCTACATCCTGATTCCCAGTAAGTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGGAAAAGTAGCTGAGAGCTACATCCTGATTCCCAGTAAGTAG  737

seq1  ATAGAAAGAAAACAATACTGGGCCTGGCACAAAGATTTCAACTTTTGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGAAAACAATACTGGGCCTGGCACAAAGATTTCAACTTTTGGAA  787

seq1  TCTCAAAACTGTCTGCCATTAACATCCCTCCTCCAACAAGGAAGTATCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAACTGTCTGCCATTAACATCCCTCCTCCAACAAGGAAGTATCTA  837

seq1  CTCCTACAAGGGCATACTTTATCCTTCCAAACAGTCACCAACTGGGTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACAAGGGCATACTTTATCCTTCCAAACAGTCACCAACTGGGTATG  887

seq1  TGAATATATGAGCCTATGTAGATTATGCTCATTCAAACTGTCACATATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATGAGCCTATGTAGATTATGCTCATTCAAACTGTCACATATGT  937

seq1  TATTGGTATTTAATTGTCTCACAAAAATTGAATGGATATGTTCCATGCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTATTTAATTGTCTCACAAAAATTGAATGGATATGTTCCATGCCT  987

seq1  CTGCCTGTGCAATGCAATATGACAAATTTATGAGCAGAATGAAGATGTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTGCAATGCAATATGACAAATTTATGAGCAGAATGAAGATGTTC  1037

seq1  TTTAAAAAGAGAATTC  1065
      ||||||||||||||||
seq2  TTTAAAAAGAGAATTC  1053