BAC Information

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BAC

Clone NameB6Ng01-317H09
Chromosome10 (Build37)
Map Location 118,958,640 - 119,099,772
singlet/doubletdoublet
Overlap geneGrip1
Upstream geneLOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317H09.bB6Ng01-317H09.g
ACCGA107599GA107600
length1,130882
definitionB6Ng01-317H09.b B6Ng01-317H09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,098,631 - 119,099,772)(118,958,640 - 118,959,524)
sequence
gaattcctaacaggatggggtcttgaaagaacagagaccatggccttcga
gtcagctcattcatgactgccgatatccagtctggtcagatggcatggag
aggggcccgcttccagcttgcatttatccagtataaagtactctgccgag
tacttcaaattaacaggaagccaggcggatccccattcatttttacctct
gtaccaatttcctgtcttctttctaagttataaagcatgtttgtgtggcc
aagaagaccccatagctatggcaggcatatgtaatcctcaaggctgaaaa
agtcatacaacttcatctgtggcaaatggctttgatctagacatcttcct
ttgcacgttttgacctcacaatgccgttccctattcaagctcaggtggca
gctactcaggcagaggataaaatggcccctcaaactctaatgaagtgaga
atctctactacctggacatttgaaataataacggcagcaaggatcgtaat
aaggagctattgatactgatcgcccactgaagcacacgtgaaggactctt
aatctccaaagtcattatttcaaatagaaaagaatgaaggttattcttat
taagggacaataattagctttggattcggggcggtggcatttagttacta
atgagattgcggagtcgcagcggctctctaaggttaatctgtggaggcag
atctgtgtctaagaactaatgtgagaggtggaatcagaggaagagcattt
gtcctagacgagacaggaaaggtacccgccacagcaatggcgggaagcgc
tgcactcttaatggggtatatgtaaaatttttcctagctgattggttgac
atttttcttgccggtaatgttattactcaccttgtaaaatgaattcatca
cacaccagggcataggattaagtctgaaatgcctaagatttctcagactg
caggaaattggttttacctactggttggtaccaagaagcagcaggctggc
acaagagcctgagaaccaaatttagtccccaggagagtgagagcggggga
aagcttcagcactgggcccctcttgtctgcactctggcgaactgagactc
aaacattcagcccaccacaacatgtttcaa
gaattcttattaagctctctgtgctggcttagacctgtaaatgccaaaac
aagccgtcctccccactgattaacattagcccccctccccaaccccccaa
accaattattcctaggaaagacttcacgctttagccttttcagcagaacc
ttctggaggaatccaaaggttccgtacctcctgtccagcgcagaaggcag
cggccatttctgggttttcatctcttgaacagtagtagctagtgccttgt
agctaatgcctctgagaacggaaagtttcctgtgacccgctttgctttgt
ttaaagcgccacatacggctggtagctatgattttgtacaacacagttgt
agtcactgccttctcgccttgcggacatttgtgactgcagaagaagaatc
caaacctaatcctttttggtgttagaaatctgaaatttgcaagttgtgga
aacggctatgggatttggttttcaaacagacttgttcaacacttggcagt
cactagacttttcctcaggtttttgggaggtgtctactaacgtagtagct
ctcttttggaacttctgagattgacaaaaacaagcgttcagaagccatgc
agtgggtttgtagctccatcctggagactgtcaattgtgtggtcattgga
aaatgcctacgcagtgtgcggtgcatggtaacttgctctttccctcctac
gctgggttcatctgcctcagattcctcctggtggatggctcatactctag
gcaggaccatcagcgctctaacaacaaataatggctgtcttcaggcttag
ccttttctcgttttgtttgttttgttttttgttttgttttggtttgtttg
ttttgttttgtttgttttgttttgttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119098631_119099772
seq2: B6Ng01-317H09.b_49_1178 (reverse)

seq1  TTGAAACATGTGTGGGGTGGGGCTGGATGTTTGAGTCCTCATGTTCGCAG  50
      ||||||||||| || ||| |||||| |||||||||| |||| ||||||  
seq2  TTGAAACATGT-TGTGGT-GGGCTGAATGTTTGAGT-CTCA-GTTCGCCA  46

seq1  GAGTGCAGGACAAGAGGGGGCCCAGTGCCTGAAGCTTCCCCCGCCTCTCA  100
      ||||||| ||||||| ||||||||||| ||||||||| ||||  ||||||
seq2  GAGTGCA-GACAAGA-GGGGCCCAGTG-CTGAAGCTTTCCCCCGCTCTCA  93

seq1  CTCCTTCCCTGGGGCTAAATTTGGTTCTCAGGGCTCTTGTGCCAGCCCTG  150
      |||  |||  ||| |||||||||||||||| |||||||||||||| ||||
seq2  CTC--TCCTGGGGACTAAATTTGGTTCTCA-GGCTCTTGTGCCAG-CCTG  139

seq1  CTGCTTCTTGGTACCAACCCAGTAGGT-AAACCAATTTCCCTGCAGTCTG  199
      ||||||||||||||||| ||||||||| |||||||||| |||||||||||
seq2  CTGCTTCTTGGTACCAA-CCAGTAGGTAAAACCAATTT-CCTGCAGTCTG  187

seq1  AGAAATCTTAGGCATTTCAGACTTAATCCTATGCCCTGGTGTGTGATGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTAGGCATTTCAGACTTAATCCTATGCCCTGGTGTGTGATGAA  237

seq1  TTCATTTTACAAGGTGAGTAATAACATTACCGGCAAGAAAAATGTCAACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTACAAGGTGAGTAATAACATTACCGGCAAGAAAAATGTCAACC  287

seq1  AATCAGCTAGGAAAAATTTTACATATACCCCATTAAGAGTGCAGCGCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTAGGAAAAATTTTACATATACCCCATTAAGAGTGCAGCGCTTC  337

seq1  CCGCCATTGCTGTGGCGGGTACCTTTCCTGTCTCGTCTAGGACAAATGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCATTGCTGTGGCGGGTACCTTTCCTGTCTCGTCTAGGACAAATGCT  387

seq1  CTTCCTCTGATTCCACCTCTCACATTAGTTCTTAGACACAGATCTGCCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGATTCCACCTCTCACATTAGTTCTTAGACACAGATCTGCCTC  437

seq1  CACAGATTAACCTTAGAGAGCCGCTGCGACTCCGCAATCTCATTAGTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTAACCTTAGAGAGCCGCTGCGACTCCGCAATCTCATTAGTAAC  487

seq1  TAAATGCCACCGCCCCGAATCCAAAGCTAATTATTGTCCCTTAATAAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCACCGCCCCGAATCCAAAGCTAATTATTGTCCCTTAATAAGAA  537

seq1  TAACCTTCATTCTTTTCTATTTGAAATAATGACTTTGGAGATTAAGAGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCATTCTTTTCTATTTGAAATAATGACTTTGGAGATTAAGAGTC  587

seq1  CTTCACGTGTGCTTCAGTGGGCGATCAGTATCAATAGCTCCTTATTACGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGTGTGCTTCAGTGGGCGATCAGTATCAATAGCTCCTTATTACGA  637

seq1  TCCTTGCTGCCGTTATTATTTCAAATGTCCAGGTAGTAGAGATTCTCACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCTGCCGTTATTATTTCAAATGTCCAGGTAGTAGAGATTCTCACT  687

seq1  TCATTAGAGTTTGAGGGGCCATTTTATCCTCTGCCTGAGTAGCTGCCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGAGTTTGAGGGGCCATTTTATCCTCTGCCTGAGTAGCTGCCACC  737

seq1  TGAGCTTGAATAGGGAACGGCATTGTGAGGTCAAAACGTGCAAAGGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGAATAGGGAACGGCATTGTGAGGTCAAAACGTGCAAAGGAAGA  787

seq1  TGTCTAGATCAAAGCCATTTGCCACAGATGAAGTTGTATGACTTTTTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGATCAAAGCCATTTGCCACAGATGAAGTTGTATGACTTTTTCAG  837

seq1  CCTTGAGGATTACATATGCCTGCCATAGCTATGGGGTCTTCTTGGCCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGATTACATATGCCTGCCATAGCTATGGGGTCTTCTTGGCCACA  887

seq1  CAAACATGCTTTATAACTTAGAAAGAAGACAGGAAATTGGTACAGAGGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATGCTTTATAACTTAGAAAGAAGACAGGAAATTGGTACAGAGGTA  937

seq1  AAAATGAATGGGGATCCGCCTGGCTTCCTGTTAATTTGAAGTACTCGGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATGGGGATCCGCCTGGCTTCCTGTTAATTTGAAGTACTCGGCA  987

seq1  GAGTACTTTATACTGGATAAATGCAAGCTGGAAGCGGGCCCCTCTCCATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTATACTGGATAAATGCAAGCTGGAAGCGGGCCCCTCTCCATG  1037

seq1  CCATCTGACCAGACTGGATATCGGCAGTCATGAATGAGCTGACTCGAAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGACCAGACTGGATATCGGCAGTCATGAATGAGCTGACTCGAAGG  1087

seq1  CCATGGTCTCTGTTCTTTCAAGACCCCATCCTGTTAGGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTCTCTGTTCTTTCAAGACCCCATCCTGTTAGGAATTC  1130

seq1: chr10_118958640_118959524
seq2: B6Ng01-317H09.g_66_947

seq1  GAATTCTTATTAAGCTCTCTGTGCTGGCTTAGACCTGTAAATGCCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTAAGCTCTCTGTGCTGGCTTAGACCTGTAAATGCCAAAAC  50

seq1  AAGCCGTCCTCCCCACTGATTAACATTAGCCCCCCTCCCCAACCCCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGTCCTCCCCACTGATTAACATTAGCCCCCCTCCCCAACCCCCCAA  100

seq1  ACCAATTATTCCTAGGAAAGACTTCACGCTTTAGCCTTTTCAGCAGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTATTCCTAGGAAAGACTTCACGCTTTAGCCTTTTCAGCAGAACC  150

seq1  TTCTGGAGGAATCCAAAGGTTCCGTACCTCCTGTCCAGCGCAGAAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGGAATCCAAAGGTTCCGTACCTCCTGTCCAGCGCAGAAGGCAG  200

seq1  CGGCCATTTCTGGGTTTTCATCTCTTGAACAGTAGTAGCTAGTGCCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATTTCTGGGTTTTCATCTCTTGAACAGTAGTAGCTAGTGCCTTGT  250

seq1  AGCTAATGCCTCTGAGAACGGAAAGTTTCCTGTGACCCGCTTTGCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGCCTCTGAGAACGGAAAGTTTCCTGTGACCCGCTTTGCTTTGT  300

seq1  TTAAAGCGCCACATACGGCTGGTAGCTATGATTTTGTACAACACAGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCGCCACATACGGCTGGTAGCTATGATTTTGTACAACACAGTTGT  350

seq1  AGTCACTGCCTTCTCGCCTTGCGGACATTTGTGACTGCAGAAGAAGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGCCTTCTCGCCTTGCGGACATTTGTGACTGCAGAAGAAGAATC  400

seq1  CAAACCTAATCCTTTTTGGTGTTAGAAATCTGAAATTTGCAAGTTGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTAATCCTTTTTGGTGTTAGAAATCTGAAATTTGCAAGTTGTGGA  450

seq1  AACGGCTATGGGATTTGGTTTTCAAACAGACTTGTTCAACACTTGGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCTATGGGATTTGGTTTTCAAACAGACTTGTTCAACACTTGGCAGT  500

seq1  CACTAGACTTTTCCTCAGGTTTTTGGGAGGTGTCTACTAACGTAGTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGACTTTTCCTCAGGTTTTTGGGAGGTGTCTACTAACGTAGTAGCT  550

seq1  CTCTTTTGGAACTTCTGAGATTGACAAAAACAAGCGTTCAGAAGCCATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGGAACTTCTGAGATTGACAAAAACAAGCGTTCAGAAGCCATGC  600

seq1  AGTGGGTTTGTAGCTCCATCCTGGAGACTGTCAATTGTGTGGTCATTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTTTGTAGCTCCATCCTGGAGACTGTCAATTGTGTGGTCATTGGA  650

seq1  AAATGCCTACGCAGTGTGCGGTGCATGGTAACTTGCTCTTTCCCTCCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTACGCAGTGTGCGGTGCATGGTAACTTGCTCTTTCCCTCCTAC  700

seq1  GCTGGGTTCATCTGCCTCAGATTCCTCCTGGTGGATGGCTCATACTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTCATCTGCCTCAGATTCCTCCTGGTGGATGGCTCATACTCTAG  750

seq1  GCAGGACCATCAGCGCTCTAACAACAAATAATGGCTGTCTTCAGGCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACCATCAGCGCTCTAACAACAAATAATGGCTGTCTTCAGGCTTAG  800

seq1  CCTTTTCTCGTTTTGTTTTGTTTTGTTTTTTGTTTTGTTTTGTTTTGTTT  850
      ||||||||||||||| |||||||||||||||||||||||||| |||| ||
seq2  CCTTTTCTCGTTTTG-TTTGTTTTGTTTTTTGTTTTGTTTTGGTTTG-TT  848

seq1  TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT  885
      |||||||||||| ||||||||||||||||||||||
seq2  TGTTTTGTTTTG-TTTGTTTTGTTTTGTTTTGTTT  882