BAC Information

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BAC

Clone NameB6Ng01-317L07
Chromosome10 (Build37)
Map Location 19,314,204 - 19,315,235
singlet/doubletsinglet
Overlap geneIfngr1
Upstream geneD10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
Downstream geneIl22ra2, Il20ra, Slc35d3, Pex7, Map3k5, Mtap7, EG621697, Bclaf1, 2610016C23Rik, LOC382344, Pde7b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317L07.bB6Ng01-317L07.g
ACCGA107783GA107784
length1,033356
definitionB6Ng01-317L07.b B6Ng01-317L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagaaggagaagcacactgttcctgaacaaagttcagggccca
agccaggaatctaatgtgcccagcatggttggtgtcgctgagtggtgtgc
aaggttagagaatgctagttagaagtgccaggcatcatcatattgagtag
tttaagggagagagtccattagggagctcaagtgtcaggagatgccatga
ggagtggctgtgtaatggaggagaggggaaagcttgcaggaatattgagg
aggtggggtcagttggactctgactgggtgtgggtggagagaggaacaca
gctgcctggcccagggcagagccttaaacctagtgccaggtacttccctc
tactttagatcctcctctgtgtgacctcatagtttgcacccgctatggta
acacctatgcccttctgtgttgtaccccagcactttataatgcatttcct
tagatttttgtcgtgttccctctgctgtttttatttgtttgtgtattctg
tcttgaagtggaatctcatatgtagcccaaacttgcttcaagctgagctc
cctggtgcagctccctgagtgctgggattattatagccccaggccagaac
accaattccttttgcttaaagtgaagattaaagtgtaaacttctgattca
cagtctctacagattttgaaagatgacattttgattctaaaacaaacaac
atcaacaaaacctcttagagattgaaagcacataaaagtttttaaaaact
gatatccaaaacttagcaacacacggcaacagtgtaaatttttacaaact
agatgagcaataaatggctttgtcataattgttcgaataatgagaatgag
attttggtcagaacaaagtaactgctttgagagcaaggaagttagtctgt
gtgcaattttcttgtgaaaggggaaatttactttaactgtcccagggatt
cataatcaaatggcacagtatccattttttcctgtacaagtacagatgtt
tcctactgaaattatatatctggtttttgtact
aagagcaggaggtggggaaggttgattgagatgtgaccttccagacaatg
acactgtggctcccctgaactcaccgctgctgaggcagcctgcacaagac
agcgcaagatcgatcagtccaaatgccagcatggacagagggctcatcag
gtccatccctagctgaggagttattgacagctgctggctgctgggggagg
gacagtcaattctctggggagtatggagtatggctatgttgccctggtgg
atagccccatagccatgcgcatccaggcactactaattgaactgagtatg
tcatccaagggaaaagaagatgtgaagagttaggggagggtatgtgaaga
gttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_19314204_19315235
seq2: B6Ng01-317L07.b_47_1079

seq1  GAATTCTCAGAAGGAGAAGCACACTGTTCCTGAACAAAGTTCAGGGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAAGGAGAAGCACACTGTTCCTGAACAAAGTTCAGGGCCCA  50

seq1  AGCCAGGAATCTAATGTGCCCAGCATGGTTGGTGTCGCTGAGTGGTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAATCTAATGTGCCCAGCATGGTTGGTGTCGCTGAGTGGTGTGC  100

seq1  AAGGTTAGAGAATGCTAGTTAGAAGTGCCAGGCATCATCATATTGAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGAGAATGCTAGTTAGAAGTGCCAGGCATCATCATATTGAGTAG  150

seq1  TTTAAGGGAGAGAGTCCATTAGGGAGCTCAAGTGTCAGGAGATGCCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGAGAGAGTCCATTAGGGAGCTCAAGTGTCAGGAGATGCCATGA  200

seq1  GGAGTGGCTGTGTAATGGAGGAGAGGGGAAAGCTTGCAGGAATATTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCTGTGTAATGGAGGAGAGGGGAAAGCTTGCAGGAATATTGAGG  250

seq1  AGGTGGGGTCAGTTGGACTCTGACTGGGTGTGGGTGGAGAGAGGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGGTCAGTTGGACTCTGACTGGGTGTGGGTGGAGAGAGGAACACA  300

seq1  GCTGCCTGGCCCAGGGCAGAGCCTTAAACCTAGTGCCAGGTACTTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGGCCCAGGGCAGAGCCTTAAACCTAGTGCCAGGTACTTCCCTC  350

seq1  TACTTTAGATCCTCCTCTGTGTGACCTCATAGTTTGCACCCGCTATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAGATCCTCCTCTGTGTGACCTCATAGTTTGCACCCGCTATGGTA  400

seq1  ACACCTATGCCCTTCTGTGTTGTACCCCAGCACTTTATAATGCATTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATGCCCTTCTGTGTTGTACCCCAGCACTTTATAATGCATTTCCT  450

seq1  TAGATTTTTGTCGTGTTCCCTCTGCTGTTTTTATTTGTTTGTGTATTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTGTCGTGTTCCCTCTGCTGTTTTTATTTGTTTGTGTATTCTG  500

seq1  TCTTGAAGTGGAATCTCATATGTAGCCCAAACTTGCTTCAAGCTGAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAGTGGAATCTCATATGTAGCCCAAACTTGCTTCAAGCTGAGCTC  550

seq1  CCTGGTGCAGCTCCCTGAGTGCTGGGATTATTATAGCCCCAGGCCAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCAGCTCCCTGAGTGCTGGGATTATTATAGCCCCAGGCCAGAAC  600

seq1  ACCAATTCCTTTTGCTTAAAGTGAAGATTAAAGTGTAAACTTCTGATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTCCTTTTGCTTAAAGTGAAGATTAAAGTGTAAACTTCTGATTCA  650

seq1  CAGTCTCTACAGATTTTGAAAGATGACATTTTGATTCTAAAACAAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTACAGATTTTGAAAGATGACATTTTGATTCTAAAACAAACAAC  700

seq1  ATCAACAAAACCTCTTAGAGATTGAAAGCACATAAAAGTTTTTAAAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAAACCTCTTAGAGATTGAAAGCACATAAAAGTTTTTAAAAACT  750

seq1  GATATCCAAAACTTAGCAACACACGGCAACAGTGTAAATTTTTACAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCAAAACTTAGCAACACACGGCAACAGTGTAAATTTTTACAAACT  800

seq1  AGATGAGCAATAAATGGCTTTGTCATAATTGTTCGAATAATGAGAATGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCAATAAATGGCTTTGTCATAATTGTTCGAATAATGAGAATGAG  850

seq1  ATTTTGGTCAGAACAAAGTAACTGC-TTGAGAGCAAGG-AGTTAGTCTGT  898
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  ATTTTGGTCAGAACAAAGTAACTGCTTTGAGAGCAAGGAAGTTAGTCTGT  900

seq1  GTGCAATTTTCTTGTGAAAGGGGAATTTTACTTTAGCTGTCCCAGGGATT  948
      ||||||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  GTGCAATTTTCTTGTGAAAGGGGAAATTTACTTTAACTGTCCCAGGGATT  950

seq1  CATAATCAAAATGCACAGTATCCATTTTTTCCTGTCCAAGTTACAGATGT  998
      ||||||||||  ||||||||||||||||||||||| |||| |||||||||
seq2  CATAATCAAATGGCACAGTATCCATTTTTTCCTGTACAAG-TACAGATGT  999

seq1  TTCTTACTGTAATTTATTATTCTGTTTTTGTACT  1032
      ||| ||||| ||||   |||   |||||||||||
seq2  TTCCTACTGAAATTATATATCTGGTTTTTGTACT  1033