BAC Information

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BAC

Clone NameB6Ng01-318G11
Chromosome10 (Build37)
Map Location 15,809,235 - 15,921,771
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318G11.bB6Ng01-318G11.g
ACCGA108300GA108301
length1,1391,054
definitionB6Ng01-318G11.b B6Ng01-318G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,809,235 - 15,810,354)(15,920,705 - 15,921,771)
sequence
gaattcttgctttgcaaatgtgagaacctgagttaagttcctttgagaaa
gtcttcagtgtctgcatctcattttgtaagacgagcaccctggaagagga
agagcagaatattgctagggaatgcaggctgtcagccaactctaggttca
ctgcatgttcacatcacaagggaatatggcagagttatagagcaggatat
ctgaaaaacctctttttggccattgcaagcaatggcatattcataagcat
cagctcacaattgtgcatatgcaacacacacattaaataattcataaatt
ggagtttacacagataaaatctacaaattatgaaaatatattataggcac
agtgtctgatacctgtatttacttatgaggtagtaaattgacttactttt
ttggaaaacaggacaggtatttcagaatttcagaaccgaagttgtctttt
ccgtgtcctttccatgaaccatgacaaactgacaagggaacatatctata
accccagcattatggaggatcccggaatttaaaggccaaatgatctatag
aaagcaagtcacagaacaaaataaaggccattggttgtatatttatagaa
atatttttttcaagaacagtataattattttatatgtgtacctgcatcct
catgtccctgacaatgctacagtttaaacgtgaaagtgtgcacagtgccg
aaggttttgtatgactgttcagagaaattttatttgtaaaatctccaaaa
tgaaaataatctaaaaaggattatacatagaataatagattacaaaacaa
aatcaaactgtgatatttattgatattagaaaaatgaacacaaaaattac
ccagacatgaaattaggtatctccgcagaagaagtatttactgcatgatt
ttatttatttaaatcttattatataaaaatctagtcttggctgggggctg
atcaatagttgtagaattatctgatattgcacaacacactatttcatgtt
aactacttttgaattttattataagaaataagaaggaggaggaactggag
ggaagaaaaggaaaaagtgtgtcctttttcatggacttgggcaactgttt
ttttgacatgggggtgcaaggcacacgaatacatcctag
gaattctgcctgacaaggtattgttccttatggcactgacttgcccaata
ggaaaatatagtaattatttccatttgactgattggtcatgaaaaggaaa
cttacacaactttttagtcaaaaaatgagacgaaaggggaataggtatga
gaagcttttgagtaacttcatcttaatttttatttacctattaatttact
tttattacttttatttatttattttatatcctgcttactgcacacctcct
ggttacccattcccaccattcatcctccatgtctcttccccttctctgag
agactggggtaatgccttggttatccccccaactctggctcttcaagtct
ttgcaagggtagatacttcctcactgctgaggcagacaagacatcccggc
ttgaaaaacatatcccacacataagcaacagcctttgggatagtccctgc
tccagttattcaggatccatatgaagaccaagctgtacgtctgctgtata
cgtgctaggaggcctaggtccagcccatgtatgttctttggttggtgctt
cagtctctgtgaattccaagagtccaggttctgactgttccttccatgga
gtttttataaactttgggcccctggaagctttccttctattactccacaa
ggaccctacaagtgtttctgtctgaatcaactgctgagtggagccactca
gagaagaaaacatactcctatgtgcaagcacagcagagtatctatcatta
atagtgttagggatcagtacttaaccatggggagagtctcaagatagtcc
agttattggttggacagtctatcaatctctgctccgtcccatgtccttac
aattctagtagacaagataagttgtgggttgaaaattttctgggtgggat
gggtggttcttgctcactggggttgctacttgggactcagtgagatccca
ttgtttgtatgtttctttttctttttttaatatgtatttctcatttacat
tccaatgctatccaaaagtcccccataccctcaacctccctcacttgcca
ccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15809235_15810354
seq2: B6Ng01-318G11.b_46_1184

seq1  GAATTCTTGCTTTGCAAATGTGAGAACCTGAGTTAAGTTCCTTTGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTTTGCAAATGTGAGAACCTGAGTTAAGTTCCTTTGAGAAA  50

seq1  GTCTTCAGTGTCTGCATCTCATTTTGTAAGACGAGCACCCTGGAAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGTGTCTGCATCTCATTTTGTAAGACGAGCACCCTGGAAGAGGA  100

seq1  AGAGCAGAATATTGCTAGGGAATGCAGGCTGTCAGCCAACTCTAGGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAATATTGCTAGGGAATGCAGGCTGTCAGCCAACTCTAGGTTCA  150

seq1  CTGCATGTTCACATCACAAGGGAATATGGCAGAGTTATAGAGCAGGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTTCACATCACAAGGGAATATGGCAGAGTTATAGAGCAGGATAT  200

seq1  CTGAAAAACCTCTTTTTGGCCATTGCAAGCAATGGCATATTCATAAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAACCTCTTTTTGGCCATTGCAAGCAATGGCATATTCATAAGCAT  250

seq1  CAGCTCACAATTGTGCATATGCAACACACACATTAAATAATTCATAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACAATTGTGCATATGCAACACACACATTAAATAATTCATAAATT  300

seq1  GGAGTTTACACAGATAAAATCTACAAATTATGAAAATATATTATAGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTACACAGATAAAATCTACAAATTATGAAAATATATTATAGGCAC  350

seq1  AGTGTCTGATACCTGTATTTACTTATGAGGTAGTAAATTGACTTACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGATACCTGTATTTACTTATGAGGTAGTAAATTGACTTACTTTT  400

seq1  TTGGAAAACAGGACAGGTATTTCAGAATTTCAGAACCGAAGTTGTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAACAGGACAGGTATTTCAGAATTTCAGAACCGAAGTTGTCTTTT  450

seq1  CCGTGTCCTTTCCATGAACCATGACAAACTGACAAGGGAACATATCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTCCTTTCCATGAACCATGACAAACTGACAAGGGAACATATCTATA  500

seq1  ACCCCAGCATTATGGAGGATCCCGGAATTTAAAGGCCAAATGATCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCATTATGGAGGATCCCGGAATTTAAAGGCCAAATGATCTATAG  550

seq1  AAAGCAAGTCACAGAACAAAATAAAGGCCATTGGTTGTATATTTATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGTCACAGAACAAAATAAAGGCCATTGGTTGTATATTTATAGAA  600

seq1  ATATTTTTTTCAAGAACAGTATAATTATTTTATATGTGTACCTGCATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTTCAAGAACAGTATAATTATTTTATATGTGTACCTGCATCCT  650

seq1  CATGTCCCTGACAATGCTACAGTTTAAACGTGAAAGTGTGCACAGTGCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCTGACAATGCTACAGTTTAAACGTGAAAGTGTGCACAGTGCCG  700

seq1  AAGGTTTTGTATGACTGTTCAGAGAAATTTTATTTGTAAAATCTCCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTGTATGACTGTTCAGAGAAATTTTATTTGTAAAATCTCCAAAA  750

seq1  TGAAAATAATCTAAAAAGGATTATACATAGAATAATAGATTACAAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAATCTAAAAAGGATTATACATAGAATAATAGATTACAAAACAA  800

seq1  AATCAAACTGTGATATTTATTGATATTAGAAAAATGAACACAAAAATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACTGTGATATTTATTGATATTAGAAAAATGAACACAAAAATTAC  850

seq1  CCAGACATGAAATTAGGTATCTCCGCAGAAGAAGTATTTACTGCATGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATGAAATTAGGTATCTCCGCAGAAGAAGTATTTACTGCATGATT  900

seq1  TTATTTATTTAAATCTTATTATATAAAAATCTAGTCTTGGCTGGGGGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTAAATCTTATTATATAAAAATCTAGTCTTGGCTGGGGGCTG  950

seq1  ATCAATAGTTGTAGAATTATCTGATATTGCACAACACACTA-TTCATGTT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCAATAGTTGTAGAATTATCTGATATTGCACAACACACTATTTCATGTT  1000

seq1  AACTAC-TTTGAATTTTA-TAT-AGAA--TAGAAGGA-GAGAAA--TGAG  1041
      |||||| ||||||||||| ||| ||||   ||||||| ||| ||   |||
seq2  AACTACTTTTGAATTTTATTATAAGAAATAAGAAGGAGGAGGAACTGGAG  1050

seq1  G--AGAAA---GAAAAGTGT---CTTTTCCATGAACTTTGGCAAACTG-T  1082
      |  |||||    ||||||||   ||||| |||| |||| ||| ||||| |
seq2  GGAAGAAAAGGAAAAAGTGTGTCCTTTTTCATGGACTTGGGC-AACTGTT  1099

seq1  TTTTTGACAT--GGGTGC-AGGCACACAAATACAACCCTAG  1120
      ||||||||||  |||||| |||||||| ||||| | |||||
seq2  TTTTTGACATGGGGGTGCAAGGCACACGAATAC-ATCCTAG  1139

seq1: chr10_15920705_15921771
seq2: B6Ng01-318G11.g_67_1120 (reverse)

seq1  TGGGTGGGCAGGTGAGGGGGGGTTTGAGGGTATGGGGGACTTTTGGGATA  50
      ||||| |||| ||||||| ||  ||||||||||||||||||||| |||||
seq2  TGGGT-GGCAAGTGAGGGAGG--TTGAGGGTATGGGGGACTTTT-GGATA  46

seq1  GCATTGGAAATGTAAATGAAGAAAATACATAATTAAAAAAAAGAAAAAAG  100
      ||||||| |||||||||||   |||||||| ||||||||||   ||||||
seq2  GCATTGG-AATGTAAATGA--GAAATACAT-ATTAAAAAAA--GAAAAAG  90

seq1  AAAACAATACAAAACAATGGGATCTCACCTGAGTCCCAAGTAGCAACCCC  150
      |||   |||| |||||||||||||||| ||||||||||||||||||||||
seq2  AAA--CATAC-AAACAATGGGATCTCA-CTGAGTCCCAAGTAGCAACCCC  136

seq1  AGTGAGCAAGAACCA-CCATCCCACCCAGAAAATTTTCAACCCACAACTT  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTGAGCAAGAACCACCCATCCCACCCAGAAAATTTTCAACCCACAACTT  186

seq1  ATCTTGTCTACTAGAATTGTAAGGACATGGGACGGAGCAGAGATTGATAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCTACTAGAATTGTAAGGACATGGGACGGAGCAGAGATTGATAG  236

seq1  ACTGTCCAACCAATAACTGGACTATCTTGAGACTCTCCCCATGGTTAAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCAACCAATAACTGGACTATCTTGAGACTCTCCCCATGGTTAAGT  286

seq1  ACTGATCCCTAACACTATTAATGATAGATACTCTGCTGTGCTTGCACATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCCCTAACACTATTAATGATAGATACTCTGCTGTGCTTGCACATA  336

seq1  GGAGTATGTTTTCTTCTCTGAGTGGCTCCACTCAGCAGTTGATTCAGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATGTTTTCTTCTCTGAGTGGCTCCACTCAGCAGTTGATTCAGACA  386

seq1  GAAACACTTGTAGGGTCCTTGTGGAGTAATAGAAGGAAAGCTTCCAGGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTTGTAGGGTCCTTGTGGAGTAATAGAAGGAAAGCTTCCAGGGG  436

seq1  CCCAAAGTTTATAAAAACTCCATGGAAGGAACAGTCAGAACCTGGACTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGTTTATAAAAACTCCATGGAAGGAACAGTCAGAACCTGGACTCT  486

seq1  TGGAATTCACAGAGACTGAAGCACCAACCAAAGAACATACATGGGCTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCACAGAGACTGAAGCACCAACCAAAGAACATACATGGGCTGGA  536

seq1  CCTAGGCCTCCTAGCACGTATACAGCAGACGTACAGCTTGGTCTTCATAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCTCCTAGCACGTATACAGCAGACGTACAGCTTGGTCTTCATAT  586

seq1  GGATCCTGAATAACTGGAGCAGGGACTATCCCAAAGGCTGTTGCTTATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTGAATAACTGGAGCAGGGACTATCCCAAAGGCTGTTGCTTATGT  636

seq1  GTGGGATATGTTTTTCAAGCCGGGATGTCTTGTCTGCCTCAGCAGTGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATATGTTTTTCAAGCCGGGATGTCTTGTCTGCCTCAGCAGTGAGG  686

seq1  AAGTATCTACCCTTGCAAAGACTTGAAGAGCCAGAGTTGGGGGGATAACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTACCCTTGCAAAGACTTGAAGAGCCAGAGTTGGGGGGATAACC  736

seq1  AAGGCATTACCCCAGTCTCTCAGAGAAGGGGAAGAGACATGGAGGATGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTACCCCAGTCTCTCAGAGAAGGGGAAGAGACATGGAGGATGAA  786

seq1  TGGTGGGAATGGGTAACCAGGAGGTGTGCAGTAAGCAGGATATAAAATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGAATGGGTAACCAGGAGGTGTGCAGTAAGCAGGATATAAAATAA  836

seq1  ATAAATAAAAGTAATAAAAGTAAATTAATAGGTAAATAAAAATTAAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAGTAATAAAAGTAAATTAATAGGTAAATAAAAATTAAGATG  886

seq1  AAGTTACTCAAAAGCTTCTCATACCTATTCCCCTTTCGTCTCATTTTTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTCAAAAGCTTCTCATACCTATTCCCCTTTCGTCTCATTTTTTG  936

seq1  ACTAAAAAGTTGTGTAAGTTTCCTTTTCATGACCAATCAGTCAAATGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGTTGTGTAAGTTTCCTTTTCATGACCAATCAGTCAAATGGAA  986

seq1  ATAATTACTATATTTTCCTATTGGGCAAGTCAGTGCCATAAGGAACAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACTATATTTTCCTATTGGGCAAGTCAGTGCCATAAGGAACAATA  1036

seq1  CCTTGTCAGGCAGAATTC  1067
      ||||||||||||||||||
seq2  CCTTGTCAGGCAGAATTC  1054