BAC Information

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BAC

Clone NameB6Ng01-318I18
Chromosome10 (Build37)
Map Location 94,992,125 - 95,173,851
singlet/doubletdoublet
Overlap geneUbe2n, Nudt4, EG628119
Upstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e
Downstream geneEea1, EG432491, LOC667380, Btg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318I18.bB6Ng01-318I18.g
ACCGA108408GA108409
length293983
definitionB6Ng01-318I18.b B6Ng01-318I18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,992,125 - 94,992,417)(95,172,881 - 95,173,851)
sequence
agctgaaaggaacactgcttgctttggtagcacacaggctgaaactccaa
cagtacagagacactacagttgagttgtcccaactctgctgtccctataa
aagtgtgatcactagcttctagggtgcgattatttgcagtgcaatttgtg
aacagtgatgcaaccagattgaggaatgaagccaacaatgcagctgccgg
taacaactgtgtaccttacacagttttagggctgctttttgttttttttt
tttttgtttgtttgtttggtttggtttggtttttgtttgtttg
gaattctcccaagagctgtttgctgggagttagcagagatcactctcact
ttggggtttgaagtgtcctgtgatagagtggagtgtggtgggttgtcgtg
gtctgatcgatgaacccgtttttttagtctatccctctttccctcaccaa
gttctcgctttatgcaccagcgatggtctcttgtgcccaaccgggagaac
caagctgtgtagcacaaactgagttccagggaatatggagtagagagatt
tcaagttaagctgatcaattatgtgatggaaataaattcatgtcagctct
gagacactctgtccttacaaaagaccaccagcagcctctcttcgtctctc
ctccctattccctctgaccatccagtccctttctctcccccaaccctcca
caatccctatttaattagattgcagttcaaaaaggaacggactgtaggtt
atttattcacagtcgtgtcctgtgaattcaatccagtgttgtcagctttc
agagggatgaatatttcaagccatagctctaattgagctcggagcccttt
tatggatatttcacggaagagctaaatacaaagaagaaaagaaaactggc
ccaagtctacctcagcaggaaagcagcctgggtccagagtggctgcagtg
gctcctttccaagtgaacactgacagctttccttcctcgcgtggtgtgct
tacttctcttagtcccttcttcttctgccccagacctgggaaataatttc
tcataccctctgtcagccccaaaccatccatccccaccttacacctgggt
gtccccacagtggatgtcctttctgcccaccaggttttgtttaaggagac
agcagagctgctgggggtcaaaagtgcccgggagagttcttcaacaagtg
tttggggaagctcaacccttgagagcagaaaagttgatagcaccttcaac
atggttggaagactcttgcctcctcacccaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94992125_94992417
seq2: B6Ng01-318I18.b_53_345

seq1  AGCTGAAAGGAACACTGCTTGCTTTGGTAGCACACAGGCTGAAACTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGGAACACTGCTTGCTTTGGTAGCACACAGGCTGAAACTCCAA  50

seq1  CAGTACAGAGACACTACAGTTGAGTTGTCCCAACTCTGCTGTCCCTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGAGACACTACAGTTGAGTTGTCCCAACTCTGCTGTCCCTATAA  100

seq1  AAGTGTGATCACTAGCTTCTAGGGTGCGATTATTTGCAGTGCAATTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGATCACTAGCTTCTAGGGTGCGATTATTTGCAGTGCAATTTGTG  150

seq1  AACAGTGATGCAACCAGATTGAGGAATGAAGCCAACAATGCAGCTGCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGATGCAACCAGATTGAGGAATGAAGCCAACAATGCAGCTGCCGG  200

seq1  TAACAACTGTGTACCTTACACAGTTTTAGGGCTGCTTTTTGTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACTGTGTACCTTACACAGTTTTAGGGCTGCTTTTTGTTTTTTTTT  250

seq1  TTTTTGTTTGTTTGTTTGGTTTGGTTTGGTTTTTGTTTGTTTG  293
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTTTGGTTTGGTTTGGTTTTTGTTTGTTTG  293

seq1: chr10_95172881_95173851
seq2: B6Ng01-318I18.g_65_1047 (reverse)

seq1  GGGT-GGTGAGGA-GCAAGAGTC-TCCA--CATGTTG-AGGTGCTATCAA  44
      |||| |||||||| ||||||||| ||||  ||||||| ||||||||||||
seq2  GGGTGGGTGAGGAGGCAAGAGTCTTCCAACCATGTTGAAGGTGCTATCAA  50

seq1  C-TTTCTGCTCTCAAGGGTTGAGCTT-CCCAAACACTTGTTGAAGAACTC  92
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTTTCTGCTCTCAAGGGTTGAGCTTCCCCAAACACTTGTTGAAGAACTC  100

seq1  T-CCGGGCACTTTTGA-CCCCAGCAGCTTCTGCTGTCTCTTTAAACAAAA  140
      | |||||||||||||| |||||||||| ||||||||||| ||||||||||
seq2  TCCCGGGCACTTTTGACCCCCAGCAGC-TCTGCTGTCTCCTTAAACAAAA  149

seq1  CCTGGTGGGCAG-AAGGACATCCACTGTGGGGACA-CCAGGTGTAAGGTG  188
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  CCTGGTGGGCAGAAAGGACATCCACTGTGGGGACACCCAGGTGTAAGGTG  199

seq1  GGGATGGATGGTTTGGGGCTGACAGAGGGTATGAGAAATTATTTCCCAGG  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGATGGTTTGGGGCTGACAGAGGGTATGAGAAATTATTTCCCAGG  249

seq1  TCTGGGGCAGAAGAAGAAGGGACTAAGAGAAGTAAGCACACCACGCGAGG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCAGAAGAAGAAGGGACTAAGAGAAGTAAGCACACCACGCGAGG  299

seq1  AAGGAAAGCTGTCAGTGTTCACTTGG-AAGGAGCCACTGCAGCCACTCTG  337
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGGAAAGCTGTCAGTGTTCACTTGGAAAGGAGCCACTGCAGCCACTCTG  349

seq1  GACCCAGGCTGCTTTCCTGCTGAGGTAGACTTGGGCCAGTTTTCTTTTCT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGCTGCTTTCCTGCTGAGGTAGACTTGGGCCAGTTTTCTTTTCT  399

seq1  TCTTTGTATTTAGCTCTTCCGTGAAATATCCATAAAAGGGCTCCGAGCTC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTATTTAGCTCTTCCGTGAAATATCCATAAAAGGGCTCCGAGCTC  449

seq1  AATTAGAGCTATGGCTTGAAATATTCATCCCTCTGAAAGCTGACAACACT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGCTATGGCTTGAAATATTCATCCCTCTGAAAGCTGACAACACT  499

seq1  GGATTGAATTCACAGGACACGACTGTGAATAAATAACCTACAGTCCGTTC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAATTCACAGGACACGACTGTGAATAAATAACCTACAGTCCGTTC  549

seq1  CTTTTTGAACTGCAATCTAATTAAATAGGGATTGTGGAGGGTTGGGGGAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAACTGCAATCTAATTAAATAGGGATTGTGGAGGGTTGGGGGAG  599

seq1  AGAAAGGGACTGGATGGTCAGAGGGAATAGGGAGGAGAGACGAAGAGAGG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGACTGGATGGTCAGAGGGAATAGGGAGGAGAGACGAAGAGAGG  649

seq1  CTGCTGGTGGTCTTTTGTAAGGACAGAGTGTCTCAGAGCTGACATGAATT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTGGTCTTTTGTAAGGACAGAGTGTCTCAGAGCTGACATGAATT  699

seq1  TATTTCCATCACATAATTGATCAGCTTAACTTGAAATCTCTCTACTCCAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCATCACATAATTGATCAGCTTAACTTGAAATCTCTCTACTCCAT  749

seq1  ATTCCCTGGAACTCAGTTTGTGCTACACAGCTTGGTTCTCCCGGTTGGGC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGGAACTCAGTTTGTGCTACACAGCTTGGTTCTCCCGGTTGGGC  799

seq1  ACAAGAGACCATCGCTGGTGCATAAAGCGAGAACTTGGTGAGGGAAAGAG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGACCATCGCTGGTGCATAAAGCGAGAACTTGGTGAGGGAAAGAG  849

seq1  GGATAGACTAAAAAAACGGGTTCATCGATCAGACCACGACAACCCACCAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGACTAAAAAAACGGGTTCATCGATCAGACCACGACAACCCACCAC  899

seq1  ACTCCACTCTATCACAGGACACTTCAAACCCCAAAGTGAGAGTGATCTCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACTCTATCACAGGACACTTCAAACCCCAAAGTGAGAGTGATCTCT  949

seq1  GCTAACTCCCAGCAAACAGCTCTTGGGAGAATTC  971
      ||||||||||||||||||||||||||||||||||
seq2  GCTAACTCCCAGCAAACAGCTCTTGGGAGAATTC  983