BAC Information

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BAC

Clone NameB6Ng01-319D06
Chromosome10 (Build37)
Map Location 21,407,014 - 21,518,515
singlet/doubletdoublet
Overlap geneEG432436, LOC100039936
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik
Downstream geneLOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319D06.bB6Ng01-319D06.g
ACCGA108895GA108896
length1,121965
definitionB6Ng01-319D06.b B6Ng01-319D06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,517,397 - 21,518,515)(21,407,014 - 21,407,981)
sequence
gaattcatgtagaccaaggtacactctcagaaatatgtgccccccacaag
tatgtacatacacccaagtcatatatgtacaccgctcccccagagagcag
agtctgctgacaccaagctgcttcctggttctactgcagtagagctgccc
tttcaactgattattggcactgctcttcggtggaacctctggagacatga
aataatgctctcatccctactctctggctttctttctaacgccggggagt
aggtggctcacagagcaaatgctaccagttttcctgatacgccatggagg
ttcattactgattttgccatttgccagtcaatgtgacttgcaggtgtcac
tgatgacatgactcagaaatggaatgtgacatctgtggccaatccacacg
tccatcctctggttagctgactaaaaaaaaccaaccaaacaaaaaaaaac
caagatgactcgggggcggggggaagttttaaatgggagaaaagccaaga
agccaattatttcttctaaatttgaaaacaaaagaccccttctctccttc
tctctcatataaaaacatggagcagcatagtccaagtcctctgcctctgg
cttcttaggcccctcatagatggtctgtgttcctctggttgtgtgctgtg
gacccaggggtcctgaaaaatccatagaagtcacccgtgagattagcctc
ctctaaggtgatctagatatcatgtcctgatggtgaagctgggcagtgtc
catggcggcagtgagctgtagattcacacagagtcagcagagcagtgtgc
tctaaatgactctcccaaatattactgcactgaatagttgcaatttttag
aatataccataaaaaaaactcactttgactcaggaaaaattgttaatgca
ggtggactctgcatcattcatcaggatgcagtgtgtgtcattgaccggtg
gtttgtaaggagtataaaattgatgggctgcctttcataaactataatct
ttgtcataatgatgcatagaaagaggaatatgggttccaaggagtgacag
aagtctctcttagctttgcttctagaggaagatgaggagttggatcacat
tatacgaaggattggaggtaa
gaattccatggagggacacgggcagtttaaccacaggtagatttagcaaa
gcaaagagggatggagtgggctgttccaaaggggcttagaaggctggtgg
attctgtatgctgatttaagaggaacgtatgaatatttatggatggatgg
catatttatgaaggcgaggccaactttctcctgtccaagttagggtagac
tagatctcttatctagggtatttcttttgtaattctctttagatatctat
gggaggtggtgggtgtgggccggtgtttcaaaggcatgtagaggtgattg
cataatacagtcagtcacagaatgtgtcatattgatggtgtttgttgata
agtcatgtatggcaggttgttggctcgccttccccccccccaaaaaaaaa
aacaataataagagagaagagataaggggcattgcagtgttgtttctctt
tttatgcttgtcaggttgggtgccagaggtgaagcgggtggttagatagc
agctgcaccctagaagccatgggtcatgtgatccgagcgcagctacatac
accaatcatttctacttctgtacttttatcaacggaattacagcaaccta
tgttttcagtaaactttaactgcgggtttcatttcacattttaaaaatcg
ttattaaagcatcagcctgctgaaatgattacacaagcctagaacggtgc
ttcggggaggagagatgcggcttctccgcagagcgagcagggtttttcaa
aggaagagtggaggggaaagggcatcggggtttcttccactttatatgaa
aatcatgagcattcataggagtgctgtcgactacctattagaaatgcatg
cagcatgaatatctacagagctgactgctttacagagatgcttttaaaaa
agatggttgctttttgcgacccaggaagatttttgttgttttgttttaca
ccccaggtttgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21517397_21518515
seq2: B6Ng01-319D06.b_47_1167 (reverse)

seq1  TTACCTCC-ATCTTTCGTAT-ATGTGATTCCAACTCCTCATCT--CTCTA  46
      |||||||| ||| ||||||| |||||| |||||||||||||||  |||||
seq2  TTACCTCCAATCCTTCGTATAATGTGA-TCCAACTCCTCATCTTCCTCTA  49

seq1  GAAGCAAAGCTA--AGAGACTTCTGTCACTCCTGGAAACCCATAATTTCC  94
      ||||||||||||  ||||||||||||||||||| | ||||||||  ||||
seq2  GAAGCAAAGCTAAGAGAGACTTCTGTCACTCCTTGGAACCCATA--TTCC  97

seq1  TCTTTCTATGCATCATTATGACAAAAAGATTATAGTTTATGAAAGGCAGC  144
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TCTTTCTATGCATCATTATGAC--AAAGATTATAGTTTATGAAAGGCAGC  145

seq1  CCATCAATTTTATACTCCTTACAAACCACCGGTCAATGACACACACTGCA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAATTTTATACTCCTTACAAACCACCGGTCAATGACACACACTGCA  195

seq1  TCCTGATGAATGATGCAGAGTCCACCTGCATTAACAATTTTTCCTGAGTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGAATGATGCAGAGTCCACCTGCATTAACAATTTTTCCTGAGTC  245

seq1  AAAGTGAG-TTTTTTTATGGTATATTCTAAAAATTGCAACTATTCAGTGC  293
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTTTTTTTTATGGTATATTCTAAAAATTGCAACTATTCAGTGC  295

seq1  AGTAATATTTGGGAGAGTCATTTAGAGCACACTGCTCTGCTGACTCTGTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATTTGGGAGAGTCATTTAGAGCACACTGCTCTGCTGACTCTGTG  345

seq1  TGAATCTACAGCTCACTGCCGCCATGGACACTGCCCAGCTTCACCATCAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTACAGCTCACTGCCGCCATGGACACTGCCCAGCTTCACCATCAG  395

seq1  GACATGATATCTAGATCACCTTAGAGGAGGCTAATCTCACGGGTGACTTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGATATCTAGATCACCTTAGAGGAGGCTAATCTCACGGGTGACTTC  445

seq1  TATGGATTTTTCAGGACCCCTGGGTCCACAGCACACAACCAGAGGAACAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATTTTTCAGGACCCCTGGGTCCACAGCACACAACCAGAGGAACAC  495

seq1  AGACCATCTATGAGGGGCCTAAGAAGCCAGAGGCAGAGGACTTGGACTAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCTATGAGGGGCCTAAGAAGCCAGAGGCAGAGGACTTGGACTAT  545

seq1  GCTGCTCCATGTTTTTATATGAGAGAGAAGGAGAGAAGGGGTCTTTTGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCCATGTTTTTATATGAGAGAGAAGGAGAGAAGGGGTCTTTTGTT  595

seq1  TTCAAATTTAGAAGAAATAATTGGCTTCTTGGCTTTTCTCCCATTTAAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTAGAAGAAATAATTGGCTTCTTGGCTTTTCTCCCATTTAAAA  645

seq1  CTTCCCCCCGCCCCCGAGTCATCTTGGTTTTTTTTTGTTTGGTTGGTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCCCGCCCCCGAGTCATCTTGGTTTTTTTTTGTTTGGTTGGTTTT  695

seq1  TTTTAGTCAGCTAACCAGAGGATGGACGTGTGGATTGGCCACAGATGTCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCAGCTAACCAGAGGATGGACGTGTGGATTGGCCACAGATGTCA  745

seq1  CATTCCATTTCTGAGTCATGTCATCAGTGACACCTGCAAGTCACATTGAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATTTCTGAGTCATGTCATCAGTGACACCTGCAAGTCACATTGAC  795

seq1  TGGCAAATGGCAAAATCAGTAATGAACCTCCATGGCGTATCAGGAAAACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATGGCAAAATCAGTAATGAACCTCCATGGCGTATCAGGAAAACT  845

seq1  GGTAGCATTTGCTCTGTGAGCCACCTACTCCCCGGCGTTAGAAAGAAAGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCATTTGCTCTGTGAGCCACCTACTCCCCGGCGTTAGAAAGAAAGC  895

seq1  CAGAGAGTAGGGATGAGAGCATTATTTCATGTCTCCAGAGGTTCCACCGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTAGGGATGAGAGCATTATTTCATGTCTCCAGAGGTTCCACCGA  945

seq1  AGAGCAGTGCCAATAATCAGTTGAAAGGGCAGCTCTACTGCAGTAGAACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTGCCAATAATCAGTTGAAAGGGCAGCTCTACTGCAGTAGAACC  995

seq1  AGGAAGCAGCTTGGTGTCAGCAGACTCTGCTCTCTGGGGGAGCGGTGTAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGCTTGGTGTCAGCAGACTCTGCTCTCTGGGGGAGCGGTGTAC  1045

seq1  ATATATGACTTGGGTGTATGTACATACTTGTGGGGGGCACATATTTCTGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGACTTGGGTGTATGTACATACTTGTGGGGGGCACATATTTCTGA  1095

seq1  GAGTGTACCTTGGTCTACATGAATTC  1119
      ||||||||||||||||||||||||||
seq2  GAGTGTACCTTGGTCTACATGAATTC  1121

seq1: chr10_21407014_21407981
seq2: B6Ng01-319D06.g_66_1030

seq1  GAATTCCATGGAGGGACACGGGCAGTTTAACCACAGGTAGATTTAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGAGGGACACGGGCAGTTTAACCACAGGTAGATTTAGCAAA  50

seq1  GCAAAGAGGGATGGAGTGGGCTGTTCCAAAGGGGCTTAGAAGGCTGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGGGATGGAGTGGGCTGTTCCAAAGGGGCTTAGAAGGCTGGTGG  100

seq1  ATTCTGTATGCTGATTTAAGAGGAACGTATGAATATTTATGGATGGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTATGCTGATTTAAGAGGAACGTATGAATATTTATGGATGGATGG  150

seq1  CATATTTATGAAGGCGAGGCCAACTTTCTCCTGTCCAAGTTAGGGTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTATGAAGGCGAGGCCAACTTTCTCCTGTCCAAGTTAGGGTAGAC  200

seq1  TAGATCTCTTATCTAGGGTATTTCTTTTGTAATTCTCTTTAGATATCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTCTTATCTAGGGTATTTCTTTTGTAATTCTCTTTAGATATCTAT  250

seq1  GGGAGGTGGTGGGTGTGGGCCGGTGTTTCAAAGGCATGTAGAGGTGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTGGTGGGTGTGGGCCGGTGTTTCAAAGGCATGTAGAGGTGATTG  300

seq1  CATAATACAGTCAGTCACAGAATGTGTCATATTGATGGTGTTTGTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACAGTCAGTCACAGAATGTGTCATATTGATGGTGTTTGTTGATA  350

seq1  AGTCATGTATGGCAGGTTGTTGGCTCGCCTTCCCCCCCCCCAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGTATGGCAGGTTGTTGGCTCGCCTTCCCCCCCCCCAAAAAAAAA  400

seq1  AACAATAATAAGAGAGAAGAGATAAGGGGCATTGCAGTGTTGTTTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATAAGAGAGAAGAGATAAGGGGCATTGCAGTGTTGTTTCTCTT  450

seq1  TTTATGCTTGTCAGGTTGGGTGCCAGAGGTGAAGCGGGTGGTTAGATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTTGTCAGGTTGGGTGCCAGAGGTGAAGCGGGTGGTTAGATAGC  500

seq1  AGCTGCACCCTAGAAGCCATGGGTCATGTGATCCGAGCGCAGCTACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCACCCTAGAAGCCATGGGTCATGTGATCCGAGCGCAGCTACATAC  550

seq1  ACCAATCATTTCTACTTCTGTACTTTTATCAACGGAATTACAGCAACCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCATTTCTACTTCTGTACTTTTATCAACGGAATTACAGCAACCTA  600

seq1  TGTTTTCAGTAAACTTTAACTGCGGGTTTCATTTCACATTTTAAAAATCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAGTAAACTTTAACTGCGGGTTTCATTTCACATTTTAAAAATCG  650

seq1  TTATTAAAGCATCAGCCTGCTGAAATGATTACACAAGCCTAGAACGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAGCATCAGCCTGCTGAAATGATTACACAAGCCTAGAACGGTGC  700

seq1  TTCGGGGAGGAGAGATGCGGCTTCTCCGCAGGAGCGAGCAGGG-TTTTCA  749
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  TTCGGGGAGGAGAGATGCGGCTTCTCCGCA-GAGCGAGCAGGGTTTTTCA  749

seq1  AAGGAAGAGTGGAGGGGAAAGGGCATCGGGGTTTCTTCCACTTTAATATG  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGGAAGAGTGGAGGGGAAAGGGCATCGGGGTTTCTTCCACTTT-ATATG  798

seq1  AAAATCATGAGCATTCATAGGAGTGCTGTCGACTACCTATTAGAAAATGC  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAATCATGAGCATTCATAGGAGTGCTGTCGACTACCTATTAG-AAATGC  847

seq1  ATGCAGCATGAATAATCTACAGAGCTGACTGCTTTACAGAGATGCTTTTA  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  ATGCAGCATGAAT-ATCTACAGAGCTGACTGCTTTACAGAGATGCTTTT-  895

seq1  AAAAAAGAGGGGTTGCTTTTTGCGACCCAGG-AGATTTTTGTTGTTTTGT  948
      ||||||||  ||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAAAGA-TGGTTGCTTTTTGCGACCCAGGAAGATTTTTGTTGTTTTGT  944

seq1  TTTACACCCCAGG-TTGTTCT  968
      ||||||||||||| |||||||
seq2  TTTACACCCCAGGTTTGTTCT  965