BAC Information

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BAC

Clone NameB6Ng01-320D13
Chromosome10 (Build37)
Map Location 26,714,275 - 26,853,612
singlet/doubletdoublet
Overlap geneLama2
Upstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320D13.bB6Ng01-320D13.g
ACCGA109646GA109647
length8701,081
definitionB6Ng01-320D13.b B6Ng01-320D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,714,275 - 26,715,139)(26,852,522 - 26,853,612)
sequence
gaattcataacaataacatgcacccttgcacgaactcatcagcttttcag
atctgagtttaatggcttcgggagggaggcagacccagccagtgctgact
aggtaggtcctctcaaacagcctagggcaagcttttgtgaggagtgttct
ccaacagagtacctcagacatgacttatcagcactcgggacatctttatg
tgagaaaaagcctcattctctcttctcttgagcttggtcaaaagcgacct
atattatgccacagcaggcaaaagggcttaaaagtgtttcaggaaagcta
taaaattggtctttatggaggtagttacttttttgcctcccaggagatgg
tcatttataaaaagaagactggctgaaattcatacatctatgtaaaagcc
cagtgggcagggcaggataatctattcacaacacacagcaatgcctttgc
tattacatggccaacaaaagaagctcaaatggtgacttaatgtcctggcc
cgaaaaggctattaatagagcaagaatcattcttgcaaatactgtagtat
gcagccttccttagaattctccaagaggattccatatgttgtgagttctt
gtggacagaatttcaccaaaacatctctaaatgtttacctctgaaaacag
acactaataacatcaatggatgccatggacttacggaacaataatgtgca
ggctgaagaaatctacctgtgggtaatgttgctgttagtgctgccacagt
cacttggtcattcaccaaataatatgctaagataatatgctaatataagc
catattttaatatggctactagaatggacagatggcagttgtgaataacg
ggcgtttttttatttggcgg

gaattctttattttcctgtgctcttctccaaatgcacaaacaataaatca
agaaacagggttgacatacttgacactggtcaggagaaaaggttaaggat
ggctatatactttgaggaccctatctagcagactccactgtgaaagatgt
tttttttttcttttaatcagttctaagtatcaaaaactccgtccttgatt
gtgtaaaggaaaagaaaaacagagaaaaatccttgtcctgtctttaatcc
tcgtggagtttctacatttttacagaaatacagtcacaagcagtactcct
acttagaaaatgaaatctttactgtcaaaatctggagcatttaagacacc
atttagagtcaggatgtaaaaatccacacggcttctagcagacttttccc
agcaattggttgggctaaattgtcaaaactgcaagaaggtccttttacca
ctggaggcagagaaaaacagcataaagtctgccatcttgtggctagaaaa
atgcatgaccctggagactggcctgcaaactaggatccaggggacttaaa
tgacaaagaacattggatatagaacagctttggggagtagctagtctatt
taaagaaaggcttaacagggaataaattaacaatggctttactacttgct
aaaagtctgggaatcttgagcagctcccagccccagattggcgctagtcc
tgcactttccacaaaatctgctactggatcaggaaacttccacaggaaaa
ttaaatggcttctcagcacacattgatgaacaacagtcctaaggttttaa
accacactggaaatcccttttcagagactcagctcacccatgtaaaacat
gaagatagagcaaagcctctgcctgaagttagtaaacttacactagttta
atttaactagtaatttttgacttgttgcatgaatgagagagtttagtgaa
gtttgctaaagtcaattcaactcaacttatttccttctgatgtcactcat
ccaagccaggtaagggctggcagatcaaaataatatcgaggctcagcaac
ctccagagcttcagtttgttgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26714275_26715139
seq2: B6Ng01-320D13.b_43_911

seq1  GAATTCATAACAATAACATGCACCCTTGCACGAACTCATCAGCTTTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACAATAACATGCACCCTTGCACGAACTCATCAGCTTTTCAG  50

seq1  ATCTGAGTTTAATGGCTTCGGGAGGGAGGCAGACCCAGCCAGTGCTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTTTAATGGCTTCGGGAGGGAGGCAGACCCAGCCAGTGCTGACT  100

seq1  AGGTAGGTCCTCTCAAACAGCCTAGGGCAAGCTTTTGTGAGGAGTGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGTCCTCTCAAACAGCCTAGGGCAAGCTTTTGTGAGGAGTGTTCT  150

seq1  CCAACAGAGTACCTCAGACATGACTTATCAGCACTCGGGACATCTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGAGTACCTCAGACATGACTTATCAGCACTCGGGACATCTTTATG  200

seq1  TGAGAAAAAGCCTCATTCTCTCTTCTCTTGAGCTTGGTCAAAAGCGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAAGCCTCATTCTCTCTTCTCTTGAGCTTGGTCAAAAGCGACCT  250

seq1  ATATTATGCCACAGCAGGCAAAAGGGCTTAAAAGTGTTTCAGGAAAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGCCACAGCAGGCAAAAGGGCTTAAAAGTGTTTCAGGAAAGCTA  300

seq1  TAAAATTGGTCTTTATGGAGGTAGTTACTTTTTTGCCTCCCAGGAGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGGTCTTTATGGAGGTAGTTACTTTTTTGCCTCCCAGGAGATGG  350

seq1  TCATTTATAAAAAGAAGACTGGCTGAAATTCATACATCTATGTAAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATAAAAAGAAGACTGGCTGAAATTCATACATCTATGTAAAAGCC  400

seq1  CAGTGGGCAGGGCAGGATAATCTATTCACAACACACAGCAATGCCTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGCAGGGCAGGATAATCTATTCACAACACACAGCAATGCCTTTGC  450

seq1  TATTACATGGCCAACAAAAGAAGCTCAAATGGTGACTTAATGTCCTGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATGGCCAACAAAAGAAGCTCAAATGGTGACTTAATGTCCTGGCC  500

seq1  CGAAAAGGCTATTAATAGAGCAAGAATCATTCTTGCAAATACTGTAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAGGCTATTAATAGAGCAAGAATCATTCTTGCAAATACTGTAGTAT  550

seq1  GCAGCCTTCCTTAGAATTCTCCAAGAGGATTCCATATGTTGTGAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTCCTTAGAATTCTCCAAGAGGATTCCATATGTTGTGAGTTCTT  600

seq1  GTGGACAGAATTTCACCAAAACATCTCTAAATGTTTACCTCTGAAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGAATTTCACCAAAACATCTCTAAATGTTTACCTCTGAAAACAG  650

seq1  ACACTAATAACATCAATGGATGCCATGGACTTACGGAACAATAATGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATAACATCAATGGATGCCATGGACTTACGGAACAATAATGTGCA  700

seq1  GGCTGAAGAAATCTACCTGTGGGTAATGTTGCTGTTAGTGCTGCCACAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGAAATCTACCTGTGGGTAATGTTGCTGTTAGTGCTGCCACAGT  750

seq1  CACTTGGTCATTCACCAAATAATATGCTAAGATAATATGCTAATATAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGTCATTCACCAAATAATATGCTAAGATAATATGCTAATATAAGC  800

seq1  CATATTTTAATATGGCTACTAGAATGGACAGATGGCAGTTGTGAATAACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTAATATGGCTACTAGAATGGACAGATGGCAGTTGTGAATAACG  850

seq1  GGCGTTTT----ATTGGCG  865
      ||||||||     ||||||
seq2  GGCGTTTTTTTATTTGGCG  869


seq1: chr10_26852522_26853612
seq2: B6Ng01-320D13.g_67_1147 (reverse)

seq1  CACACACACACA--AAACTGAAAGCTCTGGGAGGGTGGCTGGAGCCTCGA  48
      ||||||||||||  |||||| |||||||||   ||| ||| |||||||||
seq2  CACACACACACAACAAACTG-AAGCTCTGG--AGGTTGCT-GAGCCTCGA  46

seq1  TATTATTTTTGATCTGCCAACCCTTAACCTGGGCTTTGGATGGAGTGGAC  98
      ||||| ||||||||||||| ||||| ||||||   |||||| |||| |||
seq2  TATTA-TTTTGATCTGCCAGCCCTT-ACCTGG--CTTGGAT-GAGT-GAC  90

seq1  ATTCAGAAGGAAATAAGTTGAGTTGAATTGACTTTAGCAAAACTTCACTA  148
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  A-TCAGAAGGAAATAAGTTGAGTTGAATTGACTTTAGC-AAACTTCACTA  138

seq1  AACTCTCTCATTCATGCAACAAGTCAAAAATTACTAGTTAAATTAAACTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTCATTCATGCAACAAGTCAAAAATTACTAGTTAAATTAAACTA  188

seq1  GTGTAAGTTTACTAACTTCAGGCAGAGGCTTTGCTCTATCTTCATGTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTTTACTAACTTCAGGCAGAGGCTTTGCTCTATCTTCATGTTTT  238

seq1  ACATGGGTGAGCTGAGTCTCTGAAAAGGGATTTCCAGTGTGGTTTAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGTGAGCTGAGTCTCTGAAAAGGGATTTCCAGTGTGGTTTAAAAC  288

seq1  CTTAGGACTGTTGTTCATCAATGTGTGCTGAGAAGCCATTTAATTTTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACTGTTGTTCATCAATGTGTGCTGAGAAGCCATTTAATTTTCCT  338

seq1  GTGGAAGTTTCCTGATCCAGTAGCAGATTTTGTGGAAAGTGCAGGACTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTTTCCTGATCCAGTAGCAGATTTTGTGGAAAGTGCAGGACTAG  388

seq1  CGCCAATCTGGGGCTGGGAGCTGCTCAAGATTCCCAGACTTTTAGCAAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAATCTGGGGCTGGGAGCTGCTCAAGATTCCCAGACTTTTAGCAAGT  438

seq1  AGTAAAGCCATTGTTAATTTATTCCCTGTTAAGCCTTTCTTTAAATAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCCATTGTTAATTTATTCCCTGTTAAGCCTTTCTTTAAATAGAC  488

seq1  TAGCTACTCCCCAAAGCTGTTCTATATCCAATGTTCTTTGTCATTTAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTCCCCAAAGCTGTTCTATATCCAATGTTCTTTGTCATTTAAGT  538

seq1  CCCCTGGATCCTAGTTTGCAGGCCAGTCTCCAGGGTCATGCATTTTTCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGATCCTAGTTTGCAGGCCAGTCTCCAGGGTCATGCATTTTTCTA  588

seq1  GCCACAAGATGGCAGACTTTATGCTGTTTTTCTCTGCCTCCAGTGGTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAGATGGCAGACTTTATGCTGTTTTTCTCTGCCTCCAGTGGTAAA  638

seq1  AGGACCTTCTTGCAGTTTTGACAATTTAGCCCAACCAATTGCTGGGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTCTTGCAGTTTTGACAATTTAGCCCAACCAATTGCTGGGAAAA  688

seq1  GTCTGCTAGAAGCCGTGTGGATTTTTACATCCTGACTCTAAATGGTGTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTAGAAGCCGTGTGGATTTTTACATCCTGACTCTAAATGGTGTCT  738

seq1  TAAATGCTCCAGATTTTGACAGTAAAGATTTCATTTTCTAAGTAGGAGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTCCAGATTTTGACAGTAAAGATTTCATTTTCTAAGTAGGAGTA  788

seq1  CTGCTTGTGACTGTATTTCTGTAAAAATGTAGAAACTCCACGAGGATTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTGACTGTATTTCTGTAAAAATGTAGAAACTCCACGAGGATTAA  838

seq1  AGACAGGACAAGGATTTTTCTCTGTTTTTCTTTTCCTTTACACAATCAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGACAAGGATTTTTCTCTGTTTTTCTTTTCCTTTACACAATCAAG  888

seq1  GACGGAGTTTTTGATACTTAGAACTGATTAAAAGAAAAAAAAAACATCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAGTTTTTGATACTTAGAACTGATTAAAAGAAAAAAAAAACATCTT  938

seq1  TCACAGTGGAGTCTGCTAGATAGGGTCCTCAAAGTATATAGCCATCCTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGGAGTCTGCTAGATAGGGTCCTCAAAGTATATAGCCATCCTTA  988

seq1  ACCTTTTCTCCTGACCAGTGTCAAGTATGTCAACCCTGTTTCTTGATTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCTCCTGACCAGTGTCAAGTATGTCAACCCTGTTTCTTGATTTA  1038

seq1  TTGTTTGTGCATTTGGAGAAGAGCACAGGAAAATAAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTGCATTTGGAGAAGAGCACAGGAAAATAAAGAATTC  1081


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