BAC Information

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BAC

Clone NameB6Ng01-320G10
Chromosome10 (Build37)
Map Location 112,412,351 - 112,413,434
singlet/doubletsinglet
Overlap genenone
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639, 4921506J03Rik
Downstream geneLOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320G10.bB6Ng01-320G10.g
ACCGA109775GA109776
length1,0771,027
definitionB6Ng01-320G10.b B6Ng01-320G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagacagccagggatatacagagaaaccctgtctcgaaaaacc
aaaaatgaaaaaaaaaaaagtttaaagtaacactaaaatttatttcaatt
tagtataaaataaactactttatcacatgcaacaggtaaggtaattcaca
ggttgtcctggctggttttgtgttgacttgacacaagctagagtcatcag
agtggaaggagcctcagttgaggaaattcctccatgaggtccagctgtac
ggcattttctcaattagagatcagtagagaaaggctcagcccatcctgtg
gaatgacagtcctaggttttataagatagcaagctgagcaaagccatggg
aaggaagccagtaagcagcatctctccatggcttccgcttcagttcctac
ctccaggtgcctgctctgctttgagtttctgttttgtctctcttcgataa
ggaacagcaatgtggaactgtaagctgaggtaatctgtttctccccaaca
tgcttttctcttgtggtgtttcatcacagcagtaagaaccctaagaaaag
acacagggtagctctttatgaaactctaactgaaatcctaatctttttgt
agaggtagaaactaaatacagaaagatttaaactggttaagtgttctaga
ttaatgagcaacaaacttgggaatcaattgcagatagtctgagtttttgt
tcataccttttaatatgtatgtatgtttgtatgtgatggtttgtttattc
ttgcaccagggagtggcaccatttggaggtgtggccttgttggaataggt
gtgacttggtaggagtaggtgtgtcactgtgggcttaagaccctcagcct
agttgcttggaagtcagtcttccactaggagcctttggatgaagacatag
aactctcagctctgtctgcaccatgcctgtctggatactgccgtgcttct
cacttgatgatatggactgaacctctgagcctgtagccagcaccaatgtt
tttttatagactgccttgatcatggtgtctgttcacagcagtagacccta
ttagacatgcatatgatggatttatca

gaattctcacctgaagtaataccgaatggctgagaagcacctgaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaagcaacactaaga
ttccacctcacaccagtcagaatggctaagataaaaaattcaggtgacag
cagatgtttgtgaggatgtggagaaagaggaacactcctccattgttagt
gggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccagaggatcccacaatacctctcctggg
catatatccagaagatgttccaactggtaagaaggacacatgctccacta
tgttcaaagcagtgttatctataatagccagaagctggaaagaacccaga
tgtccttcaacagaggaatggctacagaaaatgtagtacatttatacaac
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacacaatcacaa
aataactcacatgatatgtactcactgataagtggatattagctcagaaa
cttggaatatccaagatacaagatacaatttgcaaaacacatgaaactca
ggaagaatgaagaccaaagtgtggacactttgccccttcttagaaggacc
cagatatagctctctcttgtgagactatgccggggcctagcaaatacaga
agtggatgatcacagtcagctattggatgggtcacacggcccccaatgca
ggagctagagatattacccaaggagctaaagggaactgcaaccctatagg
tggaacaacaatatgaactaaccagtaccccggagctcttgtctctagct
gcatatgcatcaaaagatgggcctagtcggccatcactgcaaagagaggc
ccattgacttgcaacttggatgccccagtacagggaacgccaaggccaaa
agggggagtgggttggggttagggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112412351_112413434
seq2: B6Ng01-320G10.b_45_1121

seq1  GAATTCCAAGACAGCCAGGGATATACAGAGAAACCCTGTCTCGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACAGCCAGGGATATACAGAGAAACCCTGTCTCGAAAAACC  50

seq1  AAAAATGAAAAAAAAAAAAGTTTAAAGTAACACTAAAATTTATTTCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAAAAAAAAAAAGTTTAAAGTAACACTAAAATTTATTTCAATT  100

seq1  TAGTATAAAATAAACTACTTTATCACATGCAACAGGTAAGGTAATTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAAATAAACTACTTTATCACATGCAACAGGTAAGGTAATTCACA  150

seq1  GGTTGTCCTGGCTGGTTTTGTGTTGACTTGACACAAGCTAGAGTCATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCCTGGCTGGTTTTGTGTTGACTTGACACAAGCTAGAGTCATCAG  200

seq1  AGTGGAAGGAGCCTCAGTTGAGGAAATTCCTCCATGAGGTCCAGCTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGAGCCTCAGTTGAGGAAATTCCTCCATGAGGTCCAGCTGTAC  250

seq1  GGCATTTTCTCAATTAGAGATCAGTAGAGAAAGGCTCAGCCCATCCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTCTCAATTAGAGATCAGTAGAGAAAGGCTCAGCCCATCCTGTG  300

seq1  GAATGACAGTCCTAGGTTTTATAAGATAGCAAGCTGAGCAAAGCCATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACAGTCCTAGGTTTTATAAGATAGCAAGCTGAGCAAAGCCATGGG  350

seq1  AAGGAAGCCAGTAAGCAGCATCTCTCCATGGCTTCCGCTTCAGTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCCAGTAAGCAGCATCTCTCCATGGCTTCCGCTTCAGTTCCTAC  400

seq1  CTCCAGGTGCCTGCTCTGCTTTGAGTTTCTGTTTTGTCTCTCTTCGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTGCCTGCTCTGCTTTGAGTTTCTGTTTTGTCTCTCTTCGATAA  450

seq1  GGAACAGCAATGTGGAACTGTAAGCTGAGGTAATCTGTTTCTCCCCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCAATGTGGAACTGTAAGCTGAGGTAATCTGTTTCTCCCCAACA  500

seq1  TGCTTTTCTCTTGTGGTGTTTCATCACAGCAGTAAGAACCCTAAGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTCTTGTGGTGTTTCATCACAGCAGTAAGAACCCTAAGAAAAG  550

seq1  ACACAGGGTAGCTCTTTATGAAACTCTAACTGAAATCCTAATCTTTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGTAGCTCTTTATGAAACTCTAACTGAAATCCTAATCTTTTTGT  600

seq1  AGAGGTAGAAACTAAATACAGAAAGATTTAAACTGGTTAAGTGTTCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGAAACTAAATACAGAAAGATTTAAACTGGTTAAGTGTTCTAGA  650

seq1  TTAATGAGCAACAAACTTGGGAATCAATTGCAGATAGTCTGAGTTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGCAACAAACTTGGGAATCAATTGCAGATAGTCTGAGTTTTTGT  700

seq1  TCATACCTTTTAATATGTATGTATGTTTGTATGTGATGGTTTGTTTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTTTTAATATGTATGTATGTTTGTATGTGATGGTTTGTTTATTC  750

seq1  TTGCACCAGGGAGTGGCACCATTTGGAGGTGTGGCCTTGTTGGAATAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCAGGGAGTGGCACCATTTGGAGGTGTGGCCTTGTTGGAATAGGT  800

seq1  GTGACTTGGTAGGAGTAGGTGTGTCACTGTGGGCTTAAGACCCTCAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTGGTAGGAGTAGGTGTGTCACTGTGGGCTTAAGACCCTCAGCCT  850

seq1  AGTTGCTTGGAAGTCAGTCTTCCACTAGGAGCCTTTGGATGAAGACATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTTGGAAGTCAGTCTTCCACTAGGAGCCTTTGGATGAAGACATAG  900

seq1  AACTCTCAGCTCTGTCTGCACCATGCCTGTCTGGATACTGCCGTGC-TCT  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AACTCTCAGCTCTGTCTGCACCATGCCTGTCTGGATACTGCCGTGCTTCT  950

seq1  CACCTTGATGATAATGGACTGAACCTCTGAGCCTGTAAGCCAGCACCAAT  999
      || ||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  CA-CTTGATGAT-ATGGACTGAACCTCTGAGCCTGT-AGCCAGCACCAAT  997

seq1  GTTTTTTATAAGACTTGCCTTGATCATGGTGTCTGTTCACAGCAGTAGAA  1049
      |||||||   |||| ||||||||||||||||||||||||||||||||| |
seq2  GTTTTTTTATAGAC-TGCCTTGATCATGGTGTCTGTTCACAGCAGTAG-A  1045

seq1  CCCTAATTAAGACAATGCATATGTATGATTTATCA  1084
      |||||  | |||| |||||||||   |||||||||
seq2  CCCTA--TTAGAC-ATGCATATGATGGATTTATCA  1077


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