BAC Information

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BAC

Clone NameB6Ng01-320P09
Chromosome10 (Build37)
Map Location 15,379,463 - 15,380,579
singlet/doubletsinglet
Overlap geneLOC637043
Upstream geneVta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P09.bB6Ng01-320P09.g
ACCGA110196GA110197
length6291,114
definitionB6Ng01-320P09.b B6Ng01-320P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccgagctgctcatgaagactttatctccttgctccatgtactata
ttgctgttgtgttcttcttgggatatcccggagtctcctgaaactgagaa
aatacattcttccttcagcaacttactgcctaggtatagtatccttaatt
ttgtgatccaagtattcacacagtgtctcaaagaaaattggaaaaaaatt
gatagaatttttgcacattttttctcagtaggacattggcttcctccaat
ttctggtagctatggcaccataaattaaatctctctctctctctctctct
ctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgaataaagaaattttttgttagattgtgtg
tgtattttagagagttgaacaaaatgaaagattaataaagtggggaagcg
agagattttctttccccccgtaactgtgcgcgcactccctcccccaaaag
ttatagaggggtatagacaaagaaaggagggacgagagagcttttgtgtg
atacataacataaaactactccgtgtgaagttatggagacaagacacata
aatatatagaatctaccacctacacaaca
gaattcaagagaataatccattgatactttaaaagtgtttttctaacttg
aattgtcccatttactcaataaatatgtattgtataactcatttttgtaa
aaaaatatatatgctatcattttgccatattgactatatttgttacatta
taaatcaagagttccttaatcgtgaaatgtctaaatgtgttagctttatt
tacaaatagatagttttgttacatgtgtttttttccattattgtaacatc
tgtggacatttaaaggatgaagtgagacactcgaagttatttttctctta
atataatcatgatattagaattagaatgagtgctattgttccaggaatca
atgtttgccttgtgagtttaacagttaatagacacatttttttttttttt
agaatgaattcaggtctctctctttttttttttttttttttttttttttt
aggtatacagttaagggtcttagggcatggttgctttcagttttgaactt
tgaaaatcatgccttcattttacaaagatgacatgtaacttctccatacc
atttgactataaattaattattacatactcatcttggtagctatgagtgg
agcaattttaaaatacagaagattgttggttcttaagcctaatataacaa
aatcctttctagactatctaccagaatattttcctgtgatccttttttat
ataatactctattgtctatgctctacaaccatatcactgctacaactgtg
atgaccaagtcttctacaaggagacccttgaattaagaggtgatatgtac
taagcagcacaagtttcatatatttgcatccacaaaaacatcagcttaac
taaaccttcacacatgtacaatgataattttacaggaactaatgaaatta
ggagaaattatgtcaggtggagggtctgggtgggagccaagaaaaacaaa
ttccataaggaagatagtaaggagctcagtctatccctattacttagtct
ccatactttctgcagcagagcactgcagatcttacgaggaatggggacac
tctggctccacctggcattcatatggtgtccaccctaggtaaccctggcc
tagatagttattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15379463_15380579
seq2: B6Ng01-320P09.g_68_1181

seq1  GAATTCAAGAGAATAATCCATTGATACTTTAAAAGTGTTTTTCTAACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAATAATCCATTGATACTTTAAAAGTGTTTTTCTAACTTG  50

seq1  AATTGTCCCATTTACTCAATAAATATGTATTGTATAACTCATTTTTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCCCATTTACTCAATAAATATGTATTGTATAACTCATTTTTGTAA  100

seq1  AAAAATATATATGCTATCATTTTGCCATATTGACTATATTTGTTACATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATATATGCTATCATTTTGCCATATTGACTATATTTGTTACATTA  150

seq1  TAAATCAAGAGTTCCTTAATCGTGAAATGTCTAAATGTGTTAGCTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAAGAGTTCCTTAATCGTGAAATGTCTAAATGTGTTAGCTTTATT  200

seq1  TACAAATAGATAGTTTTGTTACATGTGTTTTTTTCCATTATTGTAACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAGATAGTTTTGTTACATGTGTTTTTTTCCATTATTGTAACATC  250

seq1  TGTGGACATTTAAAGGATGAAGTGAGACACTCGAAGTTATTTTTCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACATTTAAAGGATGAAGTGAGACACTCGAAGTTATTTTTCTCTTA  300

seq1  ATATAATCATGATATTAGAATTAGAATGAGTGCTATTGTTCCAGGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCATGATATTAGAATTAGAATGAGTGCTATTGTTCCAGGAATCA  350

seq1  ATGTTTGCCTTGTGAGTTTAACAGTTAATAGACACATTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCCTTGTGAGTTTAACAGTTAATAGACACATTTTTTTTTTTTTT  400

seq1  AGAATGAATTCAGGTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTT  450
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAATGAATTCAGGTCTCTCTC-TTTTTTTTTTTTTTTTTTTTTTTTTTT  449

seq1  TAGGTATACAGTTAAGGGTCTTAGGGCATGGTTGCTTTCAGTTTTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATACAGTTAAGGGTCTTAGGGCATGGTTGCTTTCAGTTTTGAACT  499

seq1  TTGAAAATCATGCCTTCATTTTACAAAGATGACATGTAACTTCTCCATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATCATGCCTTCATTTTACAAAGATGACATGTAACTTCTCCATAC  549

seq1  CATTTGACTATAAATTAATTATTACATACTCATCTTGGTAGCTATGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACTATAAATTAATTATTACATACTCATCTTGGTAGCTATGAGTG  599

seq1  GAGCAATTTTAAAATACAGAAGATTGTTGGTTCTTAAGCCTAATATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTTTAAAATACAGAAGATTGTTGGTTCTTAAGCCTAATATAACA  649

seq1  AAATCCTTTCTAGACTATCTACCAGAATATTTTCCTGTGATCCTTTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTTCTAGACTATCTACCAGAATATTTTCCTGTGATCCTTTTTTA  699

seq1  TATAATACTCTATTGTCTATGCTCTACAACCATATCACTGCTACAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACTCTATTGTCTATGCTCTACAACCATATCACTGCTACAACTGT  749

seq1  GATGACCAAGTCTTCTACAAGGAGACCC-TGAATTAAGA-GTGATATGTA  798
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GATGACCAAGTCTTCTACAAGGAGACCCTTGAATTAAGAGGTGATATGTA  799

seq1  CTAAGCAGCACAAGTTTCATATATTTGCATCCACAAAAACATCAGCTTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGCACAAGTTTCATATATTTGCATCCACAAAAACATCAGCTTAA  849

seq1  CTAAACCTTCACACATGTACAATGATAATTTAACAGGAACTAATGAAATT  898
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTAAACCTTCACACATGTACAATGATAATTTTACAGGAACTAATGAAATT  899

seq1  AGGAGAAATTATGTCCAGGTG--AGGTCT-GGTTGGAGCAAAAGAAAACA  945
      |||||||||||||| ||||||   ||||| ||| ||||| ||  ||||||
seq2  AGGAGAAATTATGT-CAGGTGGAGGGTCTGGGTGGGAGCCAAGAAAAACA  948

seq1  AATTCCATAA-GAAGATAGTAGGAAGCTCAGTCTTATCCCTATTACTAAG  994
      |||||||||| |||||||||| | ||||||||| ||||||||||||| ||
seq2  AATTCCATAAGGAAGATAGTAAGGAGCTCAGTC-TATCCCTATTACTTAG  997

seq1  TCTCCATACTTTCTGCAGCAGAGCACTGCAAGATCCTTACAGAGGAATGG  1044
      ||||||||||||||||||||||||||||| |||| ||||| |||||||||
seq2  TCTCCATACTTTCTGCAGCAGAGCACTGC-AGAT-CTTAC-GAGGAATGG  1044

seq1  GGACACTCT-GCTCCACCTTGCATATCATTATGTGTCCACCCTAGTTAAC  1093
      ||||||||| ||||||||| |||| ||||   ||||||||||||| ||||
seq2  GGACACTCTGGCTCCACCTGGCAT-TCATATGGTGTCCACCCTAGGTAAC  1093

seq1  ACTGGCTAAGGATGATGTTATTGT  1117
       |||||  | |||   ||||||||
seq2  CCTGGCCTA-GAT--AGTTATTGT  1114