BAC Information

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BAC

Clone NameB6Ng01-322A04
Chromosome10 (Build37)
Map Location 104,361,208 - 104,362,344
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573, BC067068, Ccdc59
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322A04.bB6Ng01-322A04.g
ACCGA110968GA110969
length1,2021,120
definitionB6Ng01-322A04.b B6Ng01-322A04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatcaaatggcctagacacacctaaagaaatatt
tacattcttagtcatcagggaaatgcaaatcgaaaggaccctgagattct
accttaaaccattcagaatggctaagatcaaatctcaggtgacagcacat
gttggtgaggatgtagagaaagaacactcctccattgctggtgggattgc
aaacttgtacaaccactttgaaattcaatctgacagttcctcagaaaatt
ggaaatagttctacctgaagacccagctataccgttcctgagcatataac
caaaagattctccaccatatgacaaggacaggagccccaatatgtgcata
gagccttatttataatagtgagaagttggaaacaacccagatgttcgtca
acagaaggatggatatggaaaatgtggtacatttacacaatggaatacta
cttagctattaaaaatgatgagatcacgaattttgcctgcaagtggatgg
tactagaaaatatcatcctgagtgagataacccaaatcaaaaagggatat
attcactgataagtggttgttaatctaaaagctcagaatattcatgatac
cactcacagaccatatgaagcttaacaagaaggaagacccaagtgtagat
gtttcaatctcacttagaagagggaacaaaataatggcagacagaggaag
ggaaggacctgggtgggagaaaggagagtgaggaaaaacagggaaaggaa
aggatcaggtatagggggatagaagctgagagggcaaggagaatgaatac
aaatatggagcagtgtgggttggggaatgaaggaaaccactagaatgttc
catacaccagggatgtaggatgctctcaggatctaatggttatgacatta
gcagaaatgtccaacagagacagaacctgaagagacctcctccaggagat
agtcatggccccagctgagggatgggagtgcccacccatctcaaaaattt
tacacagttttttttcctgtctaaaggaaatgcagggacaaaaatgcaac
agagactgacgaaagactatcccaagactgcctaactgggtcaatctgaa
ggtacagcaacgagccttccaactgtctggattccaagttggcttgcgat
gagcttgcatggctgactcttggaaagagtctctgctctagacaccctta
at

gaattcactcctaaacaccattcctagacttagctaaggtctacaagttc
tttaagttgatcataatcatttacttcgtgtaaatttctccttcttctcc
ccatacttctaaattgctcccatttctggctttcctatgttctctgacat
ttcttttgttgtttgttttgttttgttttctggagacaggttctagctct
gtcctggagctcagtatatagaccaggctgaatttgaattcaaagagatc
ctcctgcctctggctgctaaatactggtattaaagtcttgcacaactatc
cctggctctctctagcagtttttaacactgctgtgggttttttttttttg
ttttttttttttatttgtttttttgtttttttttgcacacaatagactga
cttactcaaagtagaacttctgtggcttctaccaaaattctatactgaaa
agtgattttggaaatgattttttttttttaatttgcttagtagtccaaac
aaacgaagactcggtattctctcaaaacagaattggatccattaatttag
gcttttctgtttgttgtttttatctgcaaaagaggagcatgtaccctaaa
aagtctcaggtgagtgggttatcattgatgagggctgagttgacagagca
cagataccatggtgacattgcacaaaagtgtgctggcttaacaagaactc
caccacggttttctcaggctgacagcaaagctataacaactgatgaatat
atactgtggaatttcttatagtacagtaaacacttttactttattgctga
tcttaagacttcttttacttcttttagttcattacgtctgattagggaat
gtttattatcctgtattaaatagttgcagagtccattgagcgtttacatt
cttaaatatttatagataattagaccattatatgtaacagatatttattt
aaatggagggatggagttgtagactgtctagtccatttcttttatctggt
gccatcttctgatatgactttggggtggcctttctacttcactgttagca
tttcattatgaaatgtttattattgcttctagtggcgggaggatagatgt
cacacaagtttggatattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104361208_104362344
seq2: B6Ng01-322A04.g_66_1185 (reverse)

seq1  ACAATAATCCATACTTGTGTGACCATCT-TACTCTCGCCACTTAGAAGCA  49
      ||||| ||||| |||||||||| ||||| | ||| |||||| ||||||||
seq2  ACAAT-ATCCAAACTTGTGTGA-CATCTATCCTCCCGCCAC-TAGAAGCA  47

seq1  TTAATAAACATTTCATAATGAAAATGCT-ACAGTGGAAGTAGAAAAGCCC  98
       ||||||||||||||||||| ||||||| ||||| |||||||||| ||| 
seq2  ATAATAAACATTTCATAATG-AAATGCTAACAGT-GAAGTAGAAAGGCC-  94

seq1  AACCCCAAAGTCATTAATCAAGAAGGATTGGCACAGAATTAAAAAGAAAT  148
       |||||||||||||  ||| |||||   ||||||   ||  |||||||| 
seq2  -ACCCCAAAGTCAT--ATC-AGAAG--ATGGCACCAGAT--AAAAGAAA-  135

seq1  TGGAACTTAGAACAGTCTTACAACT-CATCCCTCCATTTAAATTAAATAT  197
      ||||   ||| |||||| ||||||| |||||||||||||||| |||||||
seq2  TGGA--CTAG-ACAGTC-TACAACTCCATCCCTCCATTTAAA-TAAATAT  180

seq1  CTGTTACATATAATGGTCTAATTATCTATAAATATTTAAGAATGTAAACG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACATATAATGGTCTAATTATCTATAAATATTTAAGAATGTAAACG  230

seq1  CTCAATGGACTCTGCAACTATTTAATACAGGATAATAAACATTCCCTAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGACTCTGCAACTATTTAATACAGGATAATAAACATTCCCTAAT  280

seq1  CAGACGTAATGAACTAAAAGAAGTAAAAGAAGTCTTAAGATCAGCAATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGTAATGAACTAAAAGAAGTAAAAGAAGTCTTAAGATCAGCAATAA  330

seq1  AGTAAAAGTGTTTACTGTACTATAAGAAATTCCACAGTATATATTCATCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGTGTTTACTGTACTATAAGAAATTCCACAGTATATATTCATCA  380

seq1  GTTGTTATAGCTTTGCTGTCAGCCTGAGAAAACCGTGGTGGAGTTCTTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATAGCTTTGCTGTCAGCCTGAGAAAACCGTGGTGGAGTTCTTGT  430

seq1  TAAGCCAGCACACTTTTGTGCAATGTCACCATGGTATCTGTGCTCTGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAGCACACTTTTGTGCAATGTCACCATGGTATCTGTGCTCTGTCA  480

seq1  ACTCAGCCCTCATCAATGATAACCCACTCACCTGAGACTTTTTAGGGTAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCCTCATCAATGATAACCCACTCACCTGAGACTTTTTAGGGTAC  530

seq1  ATGCTCCTCTTTTGCAGATAAAAACAACAAACAGAAAAGCCTAAATTAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCTCTTTTGCAGATAAAAACAACAAACAGAAAAGCCTAAATTAAT  580

seq1  GGATCCAATTCTGTTTTGAGAGAATACCGAGTCTTCGTTTGTTTGGACTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAATTCTGTTTTGAGAGAATACCGAGTCTTCGTTTGTTTGGACTA  630

seq1  CTAAGCAAATTAAAAAAAAAAAATCATTTCCAAAATCACTTTTCAGTATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAAATTAAAAAAAAAAAATCATTTCCAAAATCACTTTTCAGTATA  680

seq1  GAATTTTGGTAGAAGCCACAGAAGTTCTACTTTGAGTAAGTCAGTCTATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGTAGAAGCCACAGAAGTTCTACTTTGAGTAAGTCAGTCTATT  730

seq1  GTGTGCAAAAAAAAACAAAAAAACAAATAAAAAAAAAAAACAAAAAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAAAAAAAAACAAAAAAACAAATAAAAAAAAAAAACAAAAAAAAA  780

seq1  AAACCCACAGCAGTGTTAAAAACTGCTAGAGAGAGCCAGGGATAGTTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCACAGCAGTGTTAAAAACTGCTAGAGAGAGCCAGGGATAGTTGTG  830

seq1  CAAGACTTTAATACCAGTATTTAGCAGCCAGAGGCAGGAGGATCTCTTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTTAATACCAGTATTTAGCAGCCAGAGGCAGGAGGATCTCTTTG  880

seq1  AATTCAAATTCAGCCTGGTCTATATACTGAGCTCCAGGACAGAGCTAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAATTCAGCCTGGTCTATATACTGAGCTCCAGGACAGAGCTAGAA  930

seq1  CCTGTCTCCAGAAAACAAAACAAAACAAACAACAAAAGAAATGTCAGAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCAGAAAACAAAACAAAACAAACAACAAAAGAAATGTCAGAGA  980

seq1  ACATAGGAAAGCCAGAAATGGGAGCAATTTAGAAGTATGGGGAGAAGAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGAAAGCCAGAAATGGGAGCAATTTAGAAGTATGGGGAGAAGAAG  1030

seq1  GAGAAATTTACACGAAGTAAATGATTATGATCAACTTAAAGAACTTGTAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTTACACGAAGTAAATGATTATGATCAACTTAAAGAACTTGTAG  1080

seq1  ACCTTAGCTAAGTCTAGGAATGGTGTTTAGGAGTGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGCTAAGTCTAGGAATGGTGTTTAGGAGTGAATTC  1120


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