BAC Information

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BAC

Clone NameB6Ng01-322C22
Chromosome14 (Build37)10 (Build37)
Map Location 50,933,829 - 50,934,27074,222,125 - 74,223,307
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlc35f4, 3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733
Downstream geneOlfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322C22.bB6Ng01-322C22.g
ACCGA111090GA111091
length7671,170
definitionB6Ng01-322C22.b B6Ng01-322C22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(50,933,829 - 50,934,270)(74,222,125 - 74,223,307)
sequence
gaattcaaggtttaatatcatttaataaaaatagattatttataatagac
attcaaaatgtacatatcaagcataatgtttcttgcattatcatattatg
ggtggtaatttaaaaatttctttccccatatttattttctctaggctact
tatttaagatatataagtagacttataagtgtgtgtgtatgtgtgtatgt
ccgtattcatgggtctgtgaatcctccgattactcttagtttaaaattct
atttcattaaaaaaagaggtgttcatcaggtagtttcagaatctgtttta
tttatttatttatttatttatttatttatttattttttttgtgttgtgat
tttttttaattaggtattttcctcatttacattttcaatgctatcccaaa
ggtcccccatacccacccccccaatcccctacccacccactccccctttt
tggccctggcgttcccctgtactggggcatataaagtttgcaagtccaat
gggcctctctttccagtgatggccgactaggccatcttttgatacatatg
cagctaaagtcaagagctccggggtactggttagttcataatgttgttcc
acctataaggttgcagatccctttagctccttgggtactttctctagctc
ctccattgggagccctgtgatccatccaatagctgactgtgagcatccac
ttctgtgtttgctaggccccggcatagtctcacaagagacagctatatct
ggcgtcctttcagcaaa
gaattcacacataagcagggaagtcatatccagcagaaaatattttagta
gttcttgggttgaaagcatcatgccttgtttatttggcgatgaaatacta
ttaaaatgtattgtgtctgaaatataaatttcaggatagtgcacagtaaa
atcctgatggatggagtctccaagaataactcttagtgtttgaacatcaa
acatattagccaccttgcaggatattgttaataagttggggacaaggatt
tgctgaccctgttaggcagtttctctggtcttaattaacaatggaataaa
gcaatctctcctaaatccacactggctgtgaattcccatttattactatc
cttaaggactgttgctatctttccttgatttgaatacctacatatctcca
caggctctgcggctttctatctttcttctagataacatcagtcccctgcg
acccgaattttcataaatccctttgacttgataatagaaatttctaggtc
ctgtgggttcatttaatctactgcacatatagtaaaataaaccatggtag
tgctgaggattaaatcgagccaatcattccctaggtcactgtgactttaa
ggtcagcctggccttaagagggagaccctgtctcagaaaagttcgtgtat
aaggatacaaaagttcaaaagtctcacttagacacatattatttgcttgc
attatttaaagaagaaaagtactaagttggaatctgggtctgggtcttta
tatctcccatctgacactgcatacaagacttctagatgcattatctgttt
atagttattaaagatgtgtggctaaatagacaccatcgtcatctgcatct
tttaaaacaggaaagtaaagtcaggggggctttaacaatcaattagaagc
gggcttctaatgttaacgtttatgagctgaacctgccttcactgccatcc
ttagctgacaaatttccttgttttctttctgctaatgtctactggtgtat
gagagaggagggtgagtcatgggtcatgcacttcaagggacttagagtgg
taataacaccacctccaatcctgtggtgacatttcttgcccttattcaga
tgcacagatatggtgctaatataaaaattgccagttggctactgcagtta
ttttgaacacgtaatatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50933829_50934270
seq2: B6Ng01-322C22.b_377_811

seq1  -TTTTTTT------TCAATTTTTTTAATTAGGTATTTTCTTCATTTACAT  43
       |||||||      | | ||||||||||||||||||||| ||||||||||
seq2  TTTTTTTTGTGTTGTGATTTTTTTTAATTAGGTATTTTCCTCATTTACAT  50

seq1  TTCCAATGTTATCCCAAAATTCCCCCATACCCTATCCCCCACTCCCCTAC  93
      || ||||| |||||||||  ||||||||||||   |||||| ||||||||
seq2  TTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCCCAATCCCCTAC  100

seq1  CCAATCACTCCCACTTCTTGGTCCTGGCATTCCCATGTACTGAGGCATAT  143
      |||  ||||||| ||| |||| |||||| ||||| ||||||| |||||||
seq2  CCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATAT  150

seq1  AAAGTTTGCACGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGC  193
      |||||||||| | |||||||||||||||||||| |||||||| |||||||
seq2  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC  200

seq1  CATCTTCTGATACATATGCAGCTAGAGACACAAGCTCCGGGGGGTAGGGG  243
      |||||| ||||||||||||||||| || ||  ||||||||||        
seq2  CATCTTTTGATACATATGCAGCTAAAGTCAAGAGCTCCGGGG--------  242

seq1  TGGGGGCTACTGGTTAGTTCATACTGTTGTTCCACCTATAGGGTTGCAAA  293
             |||||||||||||||| |||||||||||||||| ||||||| |
seq2  -------TACTGGTTAGTTCATAATGTTGTTCCACCTATAAGGTTGCAGA  285

seq1  CCCCTTTAGCTCCTTGGGTACTTTCTCAAGCTCCTCCATTGGGGGCCCTG  343
       |||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTG  335

seq1  TGATCCATCCAATAGCTGACTGACAGAATCCACTTCTGTGTTTGCTAGGC  393
      ||||||||||||||||||||||  || |||||||||||||||||||||||
seq2  TGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGC  385

seq1  CCCCGCATAGTCTCACAAGAGAGAGTTATATCTGG-GTCCTTTCAGCAAA  442
      ||| |||||||||||||||||| || ||||||||| ||||||||||||||
seq2  CCCGGCATAGTCTCACAAGAGACAGCTATATCTGGCGTCCTTTCAGCAAA  435

seq1: chr10_74222125_74223307
seq2: B6Ng01-322C22.g_66_1235

seq1  GAATTCACACATAAGCAGGGAAGTCATATCCAGCAGAAAATATTTTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATAAGCAGGGAAGTCATATCCAGCAGAAAATATTTTAGTA  50

seq1  GTTCTTGGGTTGAAAGCATCATGCCTTGTTTATTTGGCGATGAAATACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGGTTGAAAGCATCATGCCTTGTTTATTTGGCGATGAAATACTA  100

seq1  TTAAAATGTATTGTGTCTGAAATATAAATTTCAGGATAGTGCACAGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTATTGTGTCTGAAATATAAATTTCAGGATAGTGCACAGTAAA  150

seq1  ATCCTGATGGATGGAGTCTCCAAGAATAACTCTTAGTGTTTGAACATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATGGATGGAGTCTCCAAGAATAACTCTTAGTGTTTGAACATCAA  200

seq1  ACATATTAGCCACCTTGCAGGATATTGTTAATAAGTTGGGGACAAGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGCCACCTTGCAGGATATTGTTAATAAGTTGGGGACAAGGATT  250

seq1  TGCTGACCCTGTTAGGCAGTTTCTCTGGTCTTAATTAACAATGGAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCCTGTTAGGCAGTTTCTCTGGTCTTAATTAACAATGGAATAAA  300

seq1  GCAATCTCTCCTAAATCCACACTGGCTGTGAATTCCCATTTATTACTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTCTCCTAAATCCACACTGGCTGTGAATTCCCATTTATTACTATC  350

seq1  CTTAAGGACTGTTGCTATCTTTCCTTGATTTGAATACCTACATATCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGACTGTTGCTATCTTTCCTTGATTTGAATACCTACATATCTCCA  400

seq1  CAGGCTCTGCGGCTTTCTATCTTTCTTCTAGATAACATCAGTCCCCTGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTGCGGCTTTCTATCTTTCTTCTAGATAACATCAGTCCCCTGCG  450

seq1  ACCCGAATTTTCATAAATCCCTTTGACTTGATAATAGAAATTTCTAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAATTTTCATAAATCCCTTTGACTTGATAATAGAAATTTCTAGGTC  500

seq1  CTGTGGGTTCATTTAATCTACTGCACATATAGTAAAATAAACCATGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTTCATTTAATCTACTGCACATATAGTAAAATAAACCATGGTAG  550

seq1  TGCTGAGGATTAAATCGAGCCAATCATTCCCTAGGTCACTGTGACTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGATTAAATCGAGCCAATCATTCCCTAGGTCACTGTGACTTTAA  600

seq1  GGTCAGCCTGGCCTTAAGAGGGAGACCCTGTCTCAGAAAAGTTCGTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCTGGCCTTAAGAGGGAGACCCTGTCTCAGAAAAGTTCGTGTAT  650

seq1  AAGGATACAAAAGTTCAAAAGTCTCACTTAGACACATATTATTTGCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATACAAAAGTTCAAAAGTCTCACTTAGACACATATTATTTGCTTGC  700

seq1  ATTATTTAAAGAAGAAAAGTACTAAGTTGGAATCTGGGTCTGGGTCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTAAAGAAGAAAAGTACTAAGTTGGAATCTGGGTCTGGGTCTTTA  750

seq1  TATCTCCCATCTGACACTGCATACAAGACTTCTAGATGCATTATCTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCCATCTGACACTGCATACAAGACTTCTAGATGCATTATCTGTTT  800

seq1  ATAGTTATTAAAGATGTGTGGCTAAATAGACACCATCGTCATCTGCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTATTAAAGATGTGTGGCTAAATAGACACCATCGTCATCTGCATCT  850

seq1  TTTAAAACAGGAAAGTAAAGTCAGGGGGGCTTTAACAATCAATTAGAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAGGAAAGTAAAGTCAGGGGGGCTTTAACAATCAATTAGAAGC  900

seq1  GGGCTTCTAATGTTAACGTTTATGAGCTGAACCTGCCTTCACTGCCATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTAATGTTAACGTTTATGAGCTGAACCTGCCTTCACTGCCATCC  950

seq1  TTAGCTGACAAATTTCCTTGTTTTCTTTCTGCTAATGTCTACTGGTGTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAGCTGACAAATTTCCTTGTTTTCTTTCTGCTAATGTCTACTGGTGTA-  999

seq1  TGAGAAGAGGAGGGTGAAGGTCATTGGGTCATGGCACCTTCAAGGGGACT  1050
      |||| ||||||||||||  |||| |||||||| ||| |||||| ||||||
seq2  TGAG-AGAGGAGGGTGA--GTCA-TGGGTCAT-GCA-CTTCAA-GGGACT  1042

seq1  TAGGAAGTGGGTAT-ACACCACCTCC-ATCCTGTGGTGACATTTCTTGCC  1098
      |||  |||||  || ||||||||||| |||||||||||||||||||||||
seq2  TAG--AGTGGTAATAACACCACCTCCAATCCTGTGGTGACATTTCTTGCC  1090

seq1  C-TATTCAGATGCCACAGGATAATGTGGTAATATAAAATTTGCCCAGTTT  1147
      | |||||||||| |||| ||||  ||| |||||||||| ||| |||| ||
seq2  CTTATTCAGATG-CACA-GATATGGTGCTAATATAAAAATTG-CCAG-TT  1136

seq1  GCCTACTGCAGTAATTTGAAACACGTAAAATATACC  1183
      | |||||||||| ||||  |||||||  ||||||||
seq2  GGCTACTGCAGTTATTTTGAACACGT--AATATACC  1170