BAC Information

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BAC

Clone NameB6Ng01-322L10
Chromosome10 (Build37)
Map Location 40,260,709 - 40,436,929
singlet/doubletdoublet
Overlap geneSlc22a16, Ddo, 9030224M15Rik
Upstream geneFyn, Traf3ip2, LOC667964, EG667970, E130307A14Rik, Rev3l, EG666304, LOC213332, 4930547M16Rik, LOC667982, 2010001E11Rik, LOC667994, LOC100041085, BC021785, AI317395, EG666342, Slc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374
Downstream geneCdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322L10.bB6Ng01-322L10.g
ACCGA111486GA111487
length8741,102
definitionB6Ng01-322L10.b B6Ng01-322L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,436,059 - 40,436,929)(40,260,709 - 40,261,807)
sequence
gaattcactaacttgtactaggttcaaagctggcttatcctttctggtcc
agtgttagtcacaagctgcttttaagagtcctagtttttcaggcctctgc
tatgtgcaaagtaaactacgtggggcagatgctttgctgatattcttctt
gcctctcactttgtactatttggtatgatctgatgcaggggagttggctt
aactaggagccttatgaagacaccacatgtcccttgcaatcccccacaga
actggttccaagggacatttttacattagtttaaatgccagagagaaaag
agcatgatacatctctcagagttgagaacggcgtttttattaatttgggg
gcagggtaggagaattcactaacttggctttgtagaaataccttaaagta
gctaaatataactgcttttactcagacagaaataagctgtgaaatctgag
agtccttgattcagttctgctcacataaaaataaaaatcagggtctagag
agattgtgggaactaaagggggtaggggaagaaatggggagagcgaatag
cccacgtccggccagagttcttcctatgctctgggcaggcggactgacgc
tttctgggagggctgccagacattttccactcagccctgggtgggcatct
aagtcactgaccccactcaacgaggggtggacaaggggcagcccctaacc
aggggcccagagcgacaccctgtagccccagggttacaggagagagggct
gagggagagaggttctcacacaggtgagagtctgcgcattggggtcttga
tgaacagagacagtctttgggtttttagagctttattgtaaaaaggcagg
gggaaaggagaggaagtggaaaga
gaattcaatttttttggaatggatttccaagtgttttgggctgcaaaaga
agttacacagataagagtgacttaaataatagaaatttattgtctctctg
tcttaggttggtttctgttgctatataaaacatggatcaaaaacaactta
gtgggaggaaatggttcttttcaatgtatagctcccagtccttcatctgg
ggcagggctcagggcaggctctccatggcttaatcagcttgctttggagc
acaacccaggagcacctgtgcactgattagagcgtcctgggccctcctac
attaatcatcaattaaggaaatgctccccagaaatgccacagccaatcgt
atagaggccattcctcaattgagattctgtcttctcagaagattctagtt
catgtcaagttgacagaaactaaacagcacaagtgacctcttgtgccttt
cccccagcctttaacgggccaaatagaccttaagtgtttgctgcagttgg
accttaacaatccaggtggagtcaatttcctacaggagcagactgccccc
tgagcttgctttgcaactcaatccagctgaaataaaggatgggtctgtgg
gctctccctacataaatgcagtgctgactattaaactttgagccttgatc
ataaactttgtcttggcttcattcttctcttgaatcccatctgtttgcat
ttccagccgccctttcagttactcagttctccacggctgctggatgacta
cacgtggcgcccagatgagggggctgaaaataaggggactgaaaatgggg
gtgggagcccacgagaaacactgtcttgggtggagctccacagaaaacag
aagaaaagtaacagtatcctgcacagcggtaagcaacaaacggcgttaat
gctagcactagccataaattttattttttggagctgatgtttcagaggtg
cattaagataggatacagctaggctgaacaggtgttgacccagatgccga
attcacttaggggtgatagtgccatgggacaggggaattctattataagg
tattttgtctgcacacaagggctgcagccagggtgagagagcaggcttta
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40436059_40436929
seq2: B6Ng01-322L10.b_47_920 (reverse)

seq1  TCTTTCCACTTCCTCTCCTTTCCCCCTGCCTTTCTACAATAAAGCTCTAA  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTTCCACTTCCTCTCCTTTCCCCCTGCCTTTTTACAATAAAGCTCTAA  50

seq1  AA--CCAAAGACTGTCTCTGTTCATCAAGA-CCCAATGCGCAGACTCTCA  97
      ||  |||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAACCCAAAGACTGTCTCTGTTCATCAAGACCCCAATGCGCAGACTCTCA  100

seq1  CCTGTGTGAGAACCTCTCTCCCTCAGCCCTCTCTCCTGTAACCCTGGGGC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGAGAACCTCTCTCCCTCAGCCCTCTCTCCTGTAACCCTGGGGC  150

seq1  TACAGGGTGTCGCTCTGGGCCCCTGGTTAGGGGCTGCCCCTTGTCCACCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTGTCGCTCTGGGCCCCTGGTTAGGGGCTGCCCCTTGTCCACCC  200

seq1  CTCGTTGAGTGGGGTCAGTGACTTAGATGCCCACCCAGGGCTGAGTGGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTGAGTGGGGTCAGTGACTTAGATGCCCACCCAGGGCTGAGTGGAA  250

seq1  AATGTCTGGCAGCCCTCCCAGAAAGCGTCAGTCCGCCTGCCCAGAGCATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGGCAGCCCTCCCAGAAAGCGTCAGTCCGCCTGCCCAGAGCATA  300

seq1  GGAAGAACTCTGGCCGGACGTGGGCTATTCGCTCTCCCCATTTCTTCCCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAACTCTGGCCGGACGTGGGCTATTCGCTCTCCCCATTTCTTCCCC  350

seq1  TACCCCCTTTAGTTCCCACAATCTCTCTAGACCCTGATTTTTATTTTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCTTTAGTTCCCACAATCTCTCTAGACCCTGATTTTTATTTTTAT  400

seq1  GTGAGCAGAACTGAATCAAGGACTCTCAGATTTCACAGCTTATTTCTGTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGAACTGAATCAAGGACTCTCAGATTTCACAGCTTATTTCTGTC  450

seq1  TGAGTAAAAGCAGTTATATTTAGCTACTTTAAGGTATTTCTACAAAGCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAAAGCAGTTATATTTAGCTACTTTAAGGTATTTCTACAAAGCCA  500

seq1  AGTTAGTGAATTCTCCTACCCTGCCCCCAAATTAATAAAAACGCCGTTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTGAATTCTCCTACCCTGCCCCCAAATTAATAAAAACGCCGTTCT  550

seq1  CAACTCTGAGAGATGTATCATGCTCTTTTCTCTCTGGCATTTAAACTAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTGAGAGATGTATCATGCTCTTTTCTCTCTGGCATTTAAACTAAT  600

seq1  GTAAAAATGTCCCTTGGAACCAGTTCTGTGGGGGATTGCAAGGGACATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATGTCCCTTGGAACCAGTTCTGTGGGGGATTGCAAGGGACATGT  650

seq1  GGTGTCTTCATAAGGCTCCTAGTTAAGCCAACTCCCCTGCATCAGATCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTCATAAGGCTCCTAGTTAAGCCAACTCCCCTGCATCAGATCAT  700

seq1  ACCAAATAGTACAAAGTGAGAGGCAAGAAGAATATCAGCAAAGCATCTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATAGTACAAAGTGAGAGGCAAGAAGAATATCAGCAAAGCATCTGC  750

seq1  CCCACGTAGTTTACTTTGCACATAGCAGAGGCCTGAAAAACTAGGACTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTAGTTTACTTTGCACATAGCAGAGGCCTGAAAAACTAGGACTCT  800

seq1  TAAAAGCAGCTTGTGACTAACACTGGACCAGAAAGGATAAGCCAGCTTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGCTTGTGACTAACACTGGACCAGAAAGGATAAGCCAGCTTTG  850

seq1  AACCTAGTACAAGTTAGTGAATTC  871
      ||||||||||||||||||||||||
seq2  AACCTAGTACAAGTTAGTGAATTC  874

seq1: chr10_40260709_40261807
seq2: B6Ng01-322L10.g_68_1169

seq1  GAATTCAATTTTTTTGGAATGGATTTCCAAGTGTTTTGGGCTGCAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTTTTGGAATGGATTTCCAAGTGTTTTGGGCTGCAAAAGA  50

seq1  AGTTACACAGATAAGAGTGACTTAAATAATAGAAATTTATTGTCTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACAGATAAGAGTGACTTAAATAATAGAAATTTATTGTCTCTCTG  100

seq1  TCTTAGGTTGGTTTCTGTTGCTATATAAAACATGGATCAAAAACAACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTTGGTTTCTGTTGCTATATAAAACATGGATCAAAAACAACTTA  150

seq1  GTGGGAGGAAATGGTTCTTTTCAATGTATAGCTCCCAGTCCTTCATCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGGAAATGGTTCTTTTCAATGTATAGCTCCCAGTCCTTCATCTGG  200

seq1  GGCAGGGCTCAGGGCAGGCTCTCCATGGCTTAATCAGCTTGCTTTGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGCTCAGGGCAGGCTCTCCATGGCTTAATCAGCTTGCTTTGGAGC  250

seq1  ACAACCCAGGAGCACCTGTGCACTGATTAGAGCGTCCTGGGCCCTCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCAGGAGCACCTGTGCACTGATTAGAGCGTCCTGGGCCCTCCTAC  300

seq1  ATTAATCATCAATTAAGGAAATGCTCCCCAGAAATGCCACAGCCAATCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCATCAATTAAGGAAATGCTCCCCAGAAATGCCACAGCCAATCGT  350

seq1  ATAGAGGCCATTCCTCAATTGAGATTCTGTCTTCTCAGAAGATTCTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCCATTCCTCAATTGAGATTCTGTCTTCTCAGAAGATTCTAGTT  400

seq1  CATGTCAAGTTGACAGAAACTAAACAGCACAAGTGACCTCTTGTGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAGTTGACAGAAACTAAACAGCACAAGTGACCTCTTGTGCCTTT  450

seq1  CCCCCAGCCTTTAACGGGCCAAATAGACCTTAAGTGTTTGCTGCAGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGCCTTTAACGGGCCAAATAGACCTTAAGTGTTTGCTGCAGTTGG  500

seq1  ACCTTAACAATCCAGGTGGAGTCAATTTCCTACAGGAGCAGACTGCCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAACAATCCAGGTGGAGTCAATTTCCTACAGGAGCAGACTGCCCCC  550

seq1  TGAGCTTGCTTTGCAACTCAATCCAGCTGAAATAAAGGATGGGTCTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTGCTTTGCAACTCAATCCAGCTGAAATAAAGGATGGGTCTGTGG  600

seq1  GCTCTCCCTACATAAATGCAGTGCTGACTATTAAACTTTGAGCCTTGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCTACATAAATGCAGTGCTGACTATTAAACTTTGAGCCTTGATC  650

seq1  ATAAACTTTGTCTTGGCTTCATTCTTCTCTTGAATCCCATCTGTTTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTTGTCTTGGCTTCATTCTTCTCTTGAATCCCATCTGTTTGCAT  700

seq1  TTCCAGCCGCCCTTTCAGTTACTCAGTTCTCCACGGCTGCTGGATGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCGCCCTTTCAGTTACTCAGTTCTCCACGGCTGCTGGATGACTA  750

seq1  CACGTGGCGCCCAGATGAGGGGGCTGAAAATAAGGGGACTGAAAATGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGCGCCCAGATGAGGGGGCTGAAAATAAGGGGACTGAAAATGGGG  800

seq1  GTGGGAGCCCACGAGAAACACTGTCTTGGGTGGAGCTCCACAGAAAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGCCCACGAGAAACACTGTCTTGGGTGGAGCTCCACAGAAAACAG  850

seq1  AAGAAAAGTAACAGTATCCTGCACAGCGGTAAGCAACAAACGGCGTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTAACAGTATCCTGCACAGCGGTAAGCAACAAACGGCGTTAAT  900

seq1  GCTAGCACTAGCCATAAATTTTATTTTTTGGAGCTGATGTTTCAGGAGGT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTAGCACTAGCCATAAATTTTATTTTTTGGAGCTGATGTTTCA-GAGGT  949

seq1  GCATTAAGATAGGATACAGCTAGGCTGAACAGGTGTTGACCCAGATGCCG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAGATAGGATACAGCTAGGCTGAACAGGTGTTGACCCAGATGCCG  999

seq1  AATTCACCTAGGGGTGATAGTGCAATGGGACAGGGGAATTCTA-TAT-AG  1048
      ||||||| ||||||||||||||| ||||||||||||||||||| ||| ||
seq2  AATTCACTTAGGGGTGATAGTGCCATGGGACAGGGGAATTCTATTATAAG  1049

seq1  GTA-TTTGTCTGCACACAAGGGCTGCAGC--AGGTGAGAGGAGCAGGGTT  1095
      ||| |||||||||||||||||||||||||   ||||||| ||||||| ||
seq2  GTATTTTGTCTGCACACAAGGGCTGCAGCCAGGGTGAGA-GAGCAGGCTT  1098

seq1  TAAA  1099
      ||||
seq2  TAAA  1102