BAC Information

Click to search

BAC

Clone NameB6Ng01-323H08
Chromosome10 (Build37)
Map Location 32,872,151 - 32,873,178
singlet/doubletsinglet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323H08.bB6Ng01-323H08.g
ACCGA112027GA112028
length9111,029
definitionB6Ng01-323H08.b B6Ng01-323H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagttttgtatccaactgtttttccattttttattagg
tatttagctcatttacatttccaatgctataccaaaagtcccccataccc
acccacccccactcccctgcccacccactcccactttttggccctggtgt
tcccctgtactggggcatataaagtttgcaagtccaatgggcctctcttt
ccagtgatggccgactaggccatcttttgatatatatgcagctagagtca
agagctccggggtactggttagttcataatgttgttctacctatagggtt
gcagatccctttagctccttgggtactttctctagctcctccattgggag
ccctgtgatccatccattagctgactgtgagcatccacttctgtgtttgc
taggcccctgcatagtctcacaagagacagctacatctgggacctttcaa
taaaatcttgctagtgtatgcaatggtgtcagcgtttggatgctgattat
ggggtggatccctggatatggcagtctctacatggtccatcctttaatct
cagctccaaactttgtctctgtaactcattccatgggtgttttgttccca
attctaaggaggggcatagtgtccacacttcagtcttcattcttcttgag
tttcatgtgtttagcaaattgtatcttatatcttgggtatcctaggtttg
gggctaatatccacttaccagtgagtacatattgtgtgagtttctttgtg
aatgtgttacctcactcaggatgatgccctccaggtccatccatttggct
aggaatttcataaattcattctttttaatagctgagtagtactccattgt
gtagatgtaccacattttctgtatccattcttctgttgaggggcatctgg
gttctttcagc
gaattcttaagcagagaagcaaaatttattttgttatctacttcaattgt
catagttagggatactactggtgtaataaaaaaccatgaccaaaagcaag
ttagggaggaaggggtttatttgtcttatatttccacatactagttcatc
aatgaagaaagtcagggcaataatttaaagagggctagaacctggaggca
cgggctggtgcataagccatacaggggtgctgcttgctggcttggttatc
atgggttgctcagtttgttttcttagagaactcaggaccacaagccccta
ggatggcaccacccacaatggtctggacctttcccctattaattgataat
taagaaaatgccctaagtttgggtccccagaactcggtaaaagccagaca
tggaggcaaacgcctataatccagtgctggtgggctacagccaggtggat
ccccacagctggatcttatagagggattttgttaattgtgattttttttt
tctttctgaggactctaaccttagtcgagttgtacaagtacctggcacag
ttatacccgctaactaaaattttcccctcaagcaatgattaaattgatct
ggcctagatgacagtgtcaatcttaaaatcctttagctgattttaagagg
tatattacatatttaattttctgattttttccaagattttagcaagtaca
tttctctgctctcctaccaaaaattctatgtcttttctgttttatagatt
atgtttatcttatactttatgagtcttgtaagagaaaatactcttctgtt
tttatttaaattgtccctattgctcttgagaaattttaaaattgctaaac
aagttcaataatattaatattcctgtttgatctgatgagtaccacaaaaa
atgtcatatgtccttaagttttttataaaatgaatcttcttaactattgt
taaaatgaaaaatttttaatccaattttatgaactatgtctgaaaaatgt
gtttttggggggtacagataatgttctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32872151_32873178
seq2: B6Ng01-323H08.g_65_1093

seq1  GAATTCTTAAGCAGAGAAGCAAAATTTATTTTGTTATCTACTTCAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGCAGAGAAGCAAAATTTATTTTGTTATCTACTTCAATTGT  50

seq1  CATAGTTAGGGATACTACTGGTGTAATAAAAAACCATGACCAAAAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAGGGATACTACTGGTGTAATAAAAAACCATGACCAAAAGCAAG  100

seq1  TTAGGGAGGAAGGGGTTTATTTGTCTTATATTTCCACATACTAGTTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGGAAGGGGTTTATTTGTCTTATATTTCCACATACTAGTTCATC  150

seq1  AATGAAGAAAGTCAGGGCAATAATTTAAAGAGGGCTAGAACCTGGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAAGTCAGGGCAATAATTTAAAGAGGGCTAGAACCTGGAGGCA  200

seq1  CGGGCTGGTGCATAAGCCATACAGGGGTGCTGCTTGCTGGCTTGGTTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTGGTGCATAAGCCATACAGGGGTGCTGCTTGCTGGCTTGGTTATC  250

seq1  ATGGGTTGCTCAGTTTGTTTTCTTAGAGAACTCAGGACCACAAGCCCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTGCTCAGTTTGTTTTCTTAGAGAACTCAGGACCACAAGCCCCTA  300

seq1  GGATGGCACCACCCACAATGGTCTGGACCTTTCCCCTATTAATTGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCACCACCCACAATGGTCTGGACCTTTCCCCTATTAATTGATAAT  350

seq1  TAAGAAAATGCCCTAAGTTTGGGTCCCCAGAACTCGGTAAAAGCCAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAATGCCCTAAGTTTGGGTCCCCAGAACTCGGTAAAAGCCAGACA  400

seq1  TGGAGGCAAACGCCTATAATCCAGTGCTGGTGGGCTACAGCCAGGTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAAACGCCTATAATCCAGTGCTGGTGGGCTACAGCCAGGTGGAT  450

seq1  CCCCACAGCTGGATCTTATAGAGGGATTTTGTTAATTGTGATTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGCTGGATCTTATAGAGGGATTTTGTTAATTGTGATTTTTTTTT  500

seq1  TCTTTCTGAGGACTCTAACCTTAGTCGAGTTGTACAAGTACCTGGCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAGGACTCTAACCTTAGTCGAGTTGTACAAGTACCTGGCACAG  550

seq1  TTATACCCGCTAACTAAAATTTTCCCCTCAAGCAATGATTAAATTGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCCGCTAACTAAAATTTTCCCCTCAAGCAATGATTAAATTGATCT  600

seq1  GGCCTAGATGACAGTGTCAATCTTAAAATCCTTTAGCTGATTTTAAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGATGACAGTGTCAATCTTAAAATCCTTTAGCTGATTTTAAGAGG  650

seq1  TATATTACATATTTAATTTTCTGATTTTTTCCAAGA-TTTAGCAAGTACA  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATATTACATATTTAATTTTCTGATTTTTTCCAAGATTTTAGCAAGTACA  700

seq1  TTTCTCTGCTCTCCTACC-AAAATTCTATGTC-TTTCTGTTTTATAGA-T  746
      |||||||||||||||||| ||||||||||||| ||||||||||||||| |
seq2  TTTCTCTGCTCTCCTACCAAAAATTCTATGTCTTTTCTGTTTTATAGATT  750

seq1  ATGTTTATCTTATACTTTATGAGTCTTGTAAGAGAAAATACTCTTCTGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATCTTATACTTTATGAGTCTTGTAAGAGAAAATACTCTTCTGTT  800

seq1  TTTATTT-AATTGTCCCTATTGCTCTTGAGTAATTTTTAAAATTGCTAAA  845
      ||||||| |||||||||||||||||||||| || ||||||||||||||||
seq2  TTTATTTAAATTGTCCCTATTGCTCTTGAG-AAATTTTAAAATTGCTAAA  849

seq1  CAAGTACAATAATATTTAATATTCCTGTTTGATCTGATTGAGTA-CACAA  894
      ||||| |||||||| |||||||||||||||||||||| |||||| |||||
seq2  CAAGTTCAATAATA-TTAATATTCCTGTTTGATCTGA-TGAGTACCACAA  897

seq1  AAAATGTCATATGTCCATTAAGTTTTTTATAAAATGAATCTTCTTAA-TA  943
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  AAAATGTCATATGTCC-TTAAGTTTTTTATAAAATGAATCTTCTTAACTA  946

seq1  ATGTTAAAATGAAAAATATTTTAAT-CAATTTTATTGAACTATGTCTGAA  992
       |||||||||||||||| ||||||| |||||||| |||||||||||||||
seq2  TTGTTAAAATGAAAAAT-TTTTAATCCAATTTTA-TGAACTATGTCTGAA  994

seq1  AAAGTGTGTTTTTGGGGGGTACAGATAATGTACTCC  1028
      ||| ||||||||||||||||||||||||||| ||||
seq2  AAA-TGTGTTTTTGGGGGGTACAGATAATGTTCTCC  1029