MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-323H11
Chromosome	10 (Build37)
Map Location	6,058,996 - 6,059,368
singlet/doublet	singlet
Overlap gene	Akap12
Upstream gene	Syne1, Esr1, LOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2
Downstream gene	Mthfd1l, Plekhg1, Iyd, Ppp1r14c, EG666520
Link	Open Mouse BAC browser

Click to get alignment info.

name	Syne1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Esr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13982 MGI:1352467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041310 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041310
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Gm221 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237250 MGI:2685067
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	1700052N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73419 MGI:1920669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rmnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66084 MGI:1913334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zbtb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381990 MGI:2685949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mthfd1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270685 MGI:1924836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213783 MGI:2676551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iyd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70337 MGI:1917587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r14c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76142 MGI:1923392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666520 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666520 MGI:3647703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Syne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120864 GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptic nuclear envelope 1 transcript_id : NM_001079686.1

name	Syne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120815 GeneID:64009 MGI:1927152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptic nuclear envelope 1 transcript_id : NM_022027.2

name	Esr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227255 GeneID:13982 MGI:1352467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen receptor 1 (alpha) transcript_id : NM_007956.3

name	Gm221 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260617 GeneID:237250 MGI:2685067
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : gene model 221, (NCBI) transcript_id : XM_136914.7

name	1700052N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90093342 GeneID:73419 MGI:1920669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700052N19 gene transcript_id : NM_024261.2

name	Rmnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350341 GeneID:66084 MGI:1913334
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : required for meiotic nuclear division 1 homolog (S. cerevisiae) transcript_id : NM_025343.4

name	Zbtb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388824 GeneID:381990 MGI:2685949
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 2 transcript_id : NM_001033466.2

name	Akap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130742 GeneID:83397 MGI:1932576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein (gravin) 12 transcript_id : NM_031185.2

name	Mthfd1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363942 GeneID:270685 MGI:1924836
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like transcript_id : NM_172308.3

name	Plekhg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802743 GeneID:213783 MGI:2676551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family G (with RhoGef domain) member 1 transcript_id : NM_001033253.2

name	Iyd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383992 GeneID:70337 MGI:1917587
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : iodotyrosine deiodinase transcript_id : NM_027391.2

name	Ppp1r14c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130995 GeneID:76142 MGI:1923392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 14c transcript_id : NM_133485.2

name	EG666520 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387906 GeneID:666520 MGI:3647703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666520 transcript_id : XM_984367.1

name	Syne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120865 GeneID:64009 MGI:1927152
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] [Evidence IDA]; GO:0030017 - sarcomere [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; nesprin 1; enaptin165 product : synaptic nuclear envelope 1 isoform 3 protein_id : NP_001073154.1

name	Syne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120816 GeneID:64009 MGI:1927152
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS] [Evidence IDA]; GO:0030017 - sarcomere [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; nesprin 1; enaptin165 product : synaptic nuclear envelope 1 isoform 2 protein_id : NP_071310.2

name	Esr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679695 CCDS:CCDS23677.1 GeneID:13982 MGI:1352467
definition	GO_component : GO:0016585 - chromatin remodeling complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030284 - estrogen receptor activity [Evidence ISS]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IDA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030235 - nitric-oxide synthase regulator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016049 - cell growth [Evidence NAS]; GO:0030520 - estrogen receptor signaling pathway [Evidence ISS]; GO:0045839 - negative regulation of mitosis [Evidence NAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : estrogen receptor alpha product : estrogen receptor 1 (alpha) protein_id : NP_031982.1

name	Gm221 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260618 GeneID:237250 MGI:2685067
definition	codon_start : 1 product : hypothetical protein protein_id : XP_136914.7

name	1700052N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90093343 GeneID:73419 MGI:1920669
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC73419 protein_id : NP_077223.2

name	Rmnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198296 CCDS:CCDS23678.1 GeneID:66084 MGI:1913334
definition	codon_start : 1 exception : mismatches in translation product : required for meiotic nuclear division 1 homolog protein_id : NP_079619.3

name	Zbtb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701993 CCDS:CCDS23679.1 GeneID:381990 MGI:2685949
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ZBTB2-like product : zinc finger and BTB domain containing 2 protein_id : NP_001028638.1

name	Akap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13626040 CCDS:CCDS23680.1 GeneID:83397 MGI:1932576
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0030159 - receptor signaling complex scaffold activity [Evidence TAS] GO_process : GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : gercelin; v-src suppressed transcript 5; testis specific gene A12 product : A kinase (PRKA) anchor protein (gravin) 12 protein_id : NP_112462.1

name	Mthfd1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559887 CCDS:CCDS23681.1 GeneID:270685 MGI:1924836
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence ISS] GO_process : GO:0009257 - 10-formyltetrahydrofolate biosynthesis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : formyltetrahydrofolate synthetase domain containing 1 product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein_id : NP_758512.2

name	Plekhg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794546 CCDS:CCDS23682.1 GeneID:213783 MGI:2676551
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 product : pleckstrin homology domain containing, family G (with RhoGef domain) member 1 protein_id : NP_001028425.1

name	Iyd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312562 CCDS:CCDS23683.1 GeneID:70337 MGI:1917587
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : iodotyrosine dehalogenase 1 protein protein_id : NP_081667.1

name	Ppp1r14c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19311014 CCDS:CCDS23684.1 GeneID:76142 MGI:1923392
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA]; GO:0004865 - type 1 serine/threonine specific protein phosphatase inhibitor activity [Evidence IDA] GO_process : GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 product : PKC-potentiated PP1 inhibitory protein protein_id : NP_597844.1

name	EG666520 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94387907 GeneID:666520 MGI:3647703
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989461.1

name	LOC100041310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041310
definition	number : 1 pseudo : _no_value

name	LOC100041310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041310
definition	number : 2 pseudo : _no_value

clone name	MSMg01-450A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-323H11.b	B6Ng01-323H11.g
ACC	GA112033	GA112034
length	1,205	367
definition	B6Ng01-323H11.b	B6Ng01-323H11.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaggactccagggaataaccctattaaaaatggggtacagagcta aacaaaaaattttcaactgaggaatatcgatcggatagtcaagaagcacc taaagaaatggtcaatatccttagtcatcagagaaatgtaaatcaacacc agtcagagtggctaaaatcaaaaactcaggcgtcagcaggtactgctgag gatgtggagaaagaggaacactcttctattacttgtgggactgcaagctg gtacaaccactctggaaatcaatttggcgtttcctcaaaaactggacata gtactatctgaggacccagctataccactcctgggcatatacccagaaga tgctctaacttataataaggacacatgctccactatgttcatagcagcct tatttataatagccagaagctggaaagaacccagatgtcactcaacagag gaatggatacagaaaatgtggtacatttacacaattgagtactactcagc tattaaaaaacaatgaatttatgaaattcctaggcaaatggatggaacta gaacatatcatcctgagtgaggtaacccaattacaaaagaacacacatgg tatgcactcactgataagtggatattagccccaaaactccaaatacccaa gatacaattcacagaccacatgaagctcaagaagaaggaagaccgaagtg tgggtgcttcagtccttcttagaaggaaaacaaaatactcacaggagcaa atatagagataaattgtagagcagagactgaagaaaaggccatctagaaa ctgtccacctggggattcatcccatatacagttaccaaacctagacacta ctgtggatgccaagaagtgcttgctgacaggagcctgatacagctgtctc ctgagaggctctgccagagcctgacaaatacagaggtggatgctcacagc caaccattggactgagcacggcatccccaatagaggagttagagaaagga ctgaaggagctgaaggaaagactgaaggagctgagcggttgcaccccata ggaagaacacatatcaccaacagatccccagagctccagactaaactcta catgagtatgcatgagaaccatggctccagctgccaatgtagcaaggatg ctgtgaaacatcattggggaagagaggcttctgtttccggtggaagaaca ctgta	cttgttttcctgaagaattatttgttattttctgctcattttgactgctt ttaattgtttagcatttgtgtgtgaagggagtctgctgctttaagtaaac attagtgtgagtaaaaattacttggtgacaccactaagtatttgcctgat cccaatagttcttgattaacaaattggccagagtgaaattttatatgtaa gcatgattttggtaatgttcagcatagagaacttgaaatataattttcaa tgtacaacaataaatgttttttgtttttttgtttttttttttttttttgg ttttttgagacagggtttctctgtgtaaccctggctgtcctggaactcac tttgtagacctggctgg
quality values	Open. Hide. 58 20 27 38 58 36 21 52 58 29 39 58 58 42 22 58 58 38 31 22 39 62 62 62 62 62 62 62 62 49 56 56 56 56 56 45 62 37 46 62 62 54 62 47 62 49 62 62 49 62 62 62 62 62 62 62 62 62 62 59 62 62 62 46 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 41 58 58 58 58 49 54 51 58 58 58 51 49 58 58 58 58 54 58 58 58 58 58 51 40 58 58 51 41 58 46 58 50 42 58 53 53 51 58 58 50 58 52 58 58 53 53 58 37 50 50 54 53 58 50 58 58 58 52 51 47 58 58 50 54 58 58 50 58 49 58 41 53 51 54 52 53 58 58 54 39 53 47 50 51 51 54 58 58 49 40 58 58 37 37 54 51 58 28 44 42 51 52 44 58 50 50 58 52 41 40 41 50 44 42 49 54 51 52 53 50 51 51 36 30 41 53 38 50 54 54 53 39 49 54 45 39 50 52 54 52 37 51 47 22 51 34 53 39 51 33 54 52 54 53 39 53 54 40 54 49 54 42 53 45 46 51 39 43 31 37 32 41 44 47 42 37 47 39 33 36 40 32 53 33 49 54 49 35 18 44 49 37 45 37 39 53 40 38 40 37 33 52 46 23 47 31 51 29 41 35 35 45 53 52 45 31 40 32 53 32 35 35 53 28 53 40 53 32 34 52 35 53 28 31 28 32 34 35 53 32 53 52 47 38 36 42 14 38 30 43 36 31 31 36 38 51 29 30 31 38 33 26 31 23 21 30 27 29 46 46 46 13 13 30 31 25 31 23 46 30 31 30 25 31 26 31 28 31 42 33 28 33 32 31 46 35 31 32 34 43 34 35 28 25 31 36 36 31 31 42 31 31 27 25 25 31 25 35 22 25 32 31 33 25 31 32 35 36 33 27 26 31 31 28 19 19 22 19 31 21 29 16 26 28 27 19 19 28 29 31 31 37 38 30 26 32 28 22 26 31 32 12 31 25 32 12 30 29 31 31 28 31 23 21 38 7 18 18 31 28 18 14 17 44 29 21 20 31 19 31 42 37 31 25 31 32 16 12 29 27 31 31 24 32 24 24 30 33 22 18 20 25 24 19 14 9 24 4 10 32 33 34 21 33 16 14 18 28 32 22 27 27 37 37 21 13 6 18 27 17 32 24 6 30 10 21 14 9 13 17 7 16 48 19 4 9 32 27 31 31 17 26 26 10 30 7 27 32 24 19 19 12 9 21 30 27 6 23 6 25 28 18 18 18 7 27 8 24 27 6 23 7 20 10 27 14 15 28 16 30 8 28 17 20 6 27 15 18 7 24 14 10 18 9 6 12 16 12 4 5 16 8 11 4 21 8 13 16 8 10 28 28 21 24 21 20 7 7 8 6 20 21 8 3 3 3 4 16 22 8 29 9 9 3 10 18 13 7 3 2 11 11 4 8 4 6 18 14 15 13 14 9 5 1 6 17 17 6 8 11 14 9 6 10 7 12 13 14 6 6 5 7 21 15 5 6 12 10 5 3 2 3 5 6 6 7 2 3 3 2 4 6 3 15 8 4 4 9 12 22 4 6 22 13 16 4 7 9 5 9 7 17 5 13 8 3 5 6 14 6 3 5 6 17 10 3 3 4 5 7 22 19 9 21 8 4 4 4 15 3 5 6	Open. Hide. 62 62 62 62 62 62 62 62 62 49 62 62 59 62 59 62 44 59 62 62 59 62 62 59 62 59 62 59 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 54 42 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 38 41 30 41 62 56 47 56 28 32 30 23 46 46 43 27 52 34 39 27 27 20 30 17 24 21 21 18 18 32 27 29 24 26 32 26 32 20 8 11 10 12 7 14 19 9 9 5 7 7 11 11 6 9 13 9 8 16 9 9 6 9 9 5 9 19 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_6058996_6059368
seq2: B6Ng01-323H11.g_67_439 (reverse)

seq1  CCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGA  50
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAGCCAGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGTTACACAGAGA  50

seq1  AACCCTGTCTCAAAAAACCAAAAAAAAAAAAAAAAACAAAAAAACAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTCTCAAAAAACCAAAAAAAAAAAAAAAAACAAAAAAACAAAAA  100

seq1  ACATTTATTGTTGTACATTGAAAATTATATTTCAAGTTCTCTATGCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTGTTGTACATTGAAAATTATATTTCAAGTTCTCTATGCTGAA  150

seq1  CATTACCAAAATCATGCTTACATATAAAATTTCACTCTGGCCAATTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCAAAATCATGCTTACATATAAAATTTCACTCTGGCCAATTTGTT  200

seq1  AATCAAGAACTATTGGGATCAGGCAAATACTTAGTGGTGTCACCAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGAACTATTGGGATCAGGCAAATACTTAGTGGTGTCACCAAGTAA  250

seq1  TTTTTACTCACACTAATGTTTACTTAAAGCAGCAGACTCCCTTCACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTCACACTAATGTTTACTTAAAGCAGCAGACTCCCTTCACACAC  300

seq1  AAATGCTAAACAATTAAAAGCAGTCAAAATGAGCAGAAAATAACAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAAACAATTAAAAGCAGTCAAAATGAGCAGAAAATAACAAATAA  350

seq1  TTCTTCAGGAAAACAAGGAATTC  373
      |||||||||||||||||||||||
seq2  TTCTTCAGGAAAACAAGGAATTC  373

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information