BAC Information

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BAC

Clone NameB6Ng01-323K06
Chromosome10 (Build37)
Map Location 16,615,949 - 16,759,967
singlet/doubletdoublet
Overlap geneLOC100039576
Upstream geneLOC382457, LOC546472
Downstream geneLOC627511, Cited2, Txlnb, LOC665321, Heca, 3110003A17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323K06.bB6Ng01-323K06.g
ACCGA112167GA112168
length1,1371,155
definitionB6Ng01-323K06.b B6Ng01-323K06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,758,827 - 16,759,967)(16,615,949 - 16,617,100)
sequence
gaattcattctgccaatgtgatcagctcttatcttctggacttgctttct
aaaatttcttccataactgaaaggtgtaatatttttagaatgttcctttt
tatttatatttaagtgtgtgcctcagtgttcgagtgccagtatgtggcat
cagattccctagatctggagttacagagagctgtgagatgccagacatgt
gtgctaggaagtagtttcaggtcttgctctaatctactaagctatttctc
ccaactatgcaatattttataataatgcaaatgtttctctttatagtaca
aaaacaataaatcttcaggtaggcaagtttaaatgtacaaagggatcaaa
cagcaacacaggtgatcttgatatagggatccttattctgttcctttccc
actgggctactgttctattttaatacagtaaaatgatgggtttagtcttg
aggagatgctaatatattatttactggcgattctttggctaggcttatat
gaaaaaagcagagaaagtatgacactctgggtacacgcatctgctgcttt
gaaatataccagaggtaactagagtccctgtctttacctgaagcccctag
gaagcttttattcatgtcagtgggactgtatgttcacatacgtgtatttg
ttcatgtatgatgtatgcatatttctgactctgagtctgtgtacattgga
agttgaggctagggaataggaggagaggacaattcttcagggattatgca
tttgagtgcatcctgacctttgagtcatggctttattttctcagagtcaa
acactattttgtctaatatctcacccttaaggaaactgccttaaaggggt
tcttggaatagatgcccttttcatgtctaaaggcagggttgttggggtca
caggctagtacaagtaggagggatagaggacacaatctttgaaactatgg
gaactgagttgaagaaatttttcttccccacatttgtgagtatgggtaga
agaaaactcatgaaagggagaaatgagtgtattctgttgtgcagactttg
cacttttcacaagttaatcatttattttatttttcaggatgagaatataa
gagagaactgtgaaaggctctaagtcagttgttcctc

gaattctgttgcattctccagagaataacttcctttcttacccttatggg
caattttatcagcccggtacaccttctacctttcgtatgcttaaaagaga
aaaaagagaggagaggaataagagctatgcatattccggatgcaattgtt
taggccttaaaaacccttccaaatatttttcattttcatttactgcctaa
acttgcaggacctataacccaatatatctgatcccacacaactgagaggt
aggcttttgaaaagggaataaagggcaaatgaaatattaaatctgatttc
tgcaggtgagtaacctgaggaaagaaaagcgactgcatttcacatggaag
aaagtgtccctcagacctgctgtgctcaccacgctaagtcagctcaccat
caaggctcatcacgtgaaactgtaactaaacttgcaagatcgctttattc
ctagaataaatgaacttgcttttcggtttcctttttcgttttctttttat
aggtttatcacagtgaaaattcgtacaacatggcatcagactgcacatct
gaagataaaggattagcattaaagaattaaaggcatatttgatattataa
aatgacaaaaaattgtgatatgccataattcacacccacaagtatctata
tttaacaatcaggaatataaaaaaaaatgactgcattgttggaaacacct
gggaatttcatgtcttcattcaaaatgtacagatgaataagcccttaaga
ggaaatgagcaagtgcaagtagtttggtagtggtagataatcactggtcc
acctactcagtcatgctgagtccacgtgtaagtcatataattatttcctt
agtctcctctttctctttcctttaatttatattcagagaataaaaaagat
cctcaaaacattctctcattagagatacggtaagataatacaatcagaat
aacttttggagtcagtatctaacaatgacaactgctaagaagcatattca
ctccgttatcatcttcaattacagggtggtttttcttcatgtcatctcta
agaactctcttctggcttcatactgaagaaacatcagcccacatctttct
actgacctgttcaacctagaatagttccatatatatacacatgcatggaa
tgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16758827_16759967
seq2: B6Ng01-323K06.b_46_1182 (reverse)

seq1  GAGGAACAACTGACTTTAGAG-CTTTCACAGTTTCTCTCTTATA-TCTCC  48
      |||||||||||||| |||||| ||||||||| |||||||||||| |||| 
seq2  GAGGAACAACTGAC-TTAGAGCCTTTCACAG-TTCTCTCTTATATTCTCA  48

seq1  TTCTGGAAAAATTAAAATAAATGAATAAACTTGTGAAAAGTGCAAAGTTC  98
      | |||  |||| ||||||||||| || |||||||||||||||||||| ||
seq2  TCCTG--AAAAATAAAATAAATG-ATTAACTTGTGAAAAGTGCAAAG-TC  94

seq1  TGCACAACAGATAACACTCATTTCTCCCTTTCATGAG-TTTCTTCTACCC  147
      |||||||||||  |||||||||||||||||||||||| ||||||||||||
seq2  TGCACAACAGAATACACTCATTTCTCCCTTTCATGAGTTTTCTTCTACCC  144

seq1  ATACTCACAAATGTGGGGAAG-AAAATTTCTTCAACTCAGTTCCCATAGT  196
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATACTCACAAATGTGGGGAAGAAAAATTTCTTCAACTCAGTTCCCATAGT  194

seq1  TTCAAAGATTGTGTCCTCTATCCCTCCTACTTTGTACCTAGCCTGTGACC  246
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TTCAAAGATTGTGTCCTCTATCCCTCCTAC-TTGTA-CTAGCCTGTGACC  242

seq1  CCAACAACCCTGCCTTTTAGACATG-AAAGGGCATCTATTCCAAGAACCC  295
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  CCAACAACCCTGCC-TTTAGACATGAAAAGGGCATCTATTCCAAGAACCC  291

seq1  CTTTAAGGCAGTTTCCTTAAGGGTGAGATATTAGACAAAATAGTGTTTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGCAGTTTCCTTAAGGGTGAGATATTAGACAAAATAGTGTTTGA  341

seq1  CTCTGAGAAAATAAAGCCATGACTCAAAGGTCAGGATGCACTCAAATGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAAAATAAAGCCATGACTCAAAGGTCAGGATGCACTCAAATGCA  391

seq1  TAATCCCTGAAGAATTGTCCTCTCCTCCTATTCCCTAGCCTCAACTTCCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCTGAAGAATTGTCCTCTCCTCCTATTCCCTAGCCTCAACTTCCA  441

seq1  ATGTACACAGACTCAGAGTCAGAAATATGCATACATCATACATGAACAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACAGACTCAGAGTCAGAAATATGCATACATCATACATGAACAAA  491

seq1  TACACGTATGTGAACATACAGTCCCACTGACATGAATAAAAGCTTCCTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTATGTGAACATACAGTCCCACTGACATGAATAAAAGCTTCCTAG  541

seq1  GGGCTTCAGGTAAAGACAGGGACTCTAGTTACCTCTGGTATATTTCAAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGGTAAAGACAGGGACTCTAGTTACCTCTGGTATATTTCAAAG  591

seq1  CAGCAGATGCGTGTACCCAGAGTGTCATACTTTCTCTGCTTTTTTCATAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGCGTGTACCCAGAGTGTCATACTTTCTCTGCTTTTTTCATAT  641

seq1  AAGCCTAGCCAAAGAATCGCCAGTAAATAATATATTAGCATCTCCTCAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAGCCAAAGAATCGCCAGTAAATAATATATTAGCATCTCCTCAAG  691

seq1  ACTAAACCCATCATTTTACTGTATTAAAATAGAACAGTAGCCCAGTGGGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCCATCATTTTACTGTATTAAAATAGAACAGTAGCCCAGTGGGA  741

seq1  AAGGAACAGAATAAGGATCCCTATATCAAGATCACCTGTGTTGCTGTTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGAATAAGGATCCCTATATCAAGATCACCTGTGTTGCTGTTTG  791

seq1  ATCCCTTTGTACATTTAAACTTGCCTACCTGAAGATTTATTGTTTTTGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTGTACATTTAAACTTGCCTACCTGAAGATTTATTGTTTTTGTA  841

seq1  CTATAAAGAGAAACATTTGCATTATTATAAAATATTGCATAGTTGGGAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAGAGAAACATTTGCATTATTATAAAATATTGCATAGTTGGGAGA  891

seq1  AATAGCTTAGTAGATTAGAGCAAGACCTGAAACTACTTCCTAGCACACAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTAGTAGATTAGAGCAAGACCTGAAACTACTTCCTAGCACACAT  941

seq1  GTCTGGCATCTCACAGCTCTCTGTAACTCCAGATCTAGGGAATCTGATGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCATCTCACAGCTCTCTGTAACTCCAGATCTAGGGAATCTGATGC  991

seq1  CACATACTGGCACTCGAACACTGAGGCACACACTTAAATATAAATAAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTGGCACTCGAACACTGAGGCACACACTTAAATATAAATAAAAA  1041

seq1  GGAACATTCTAAAAATATTACACCTTTCAGTTATGGAAGAAATTTTAGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATTCTAAAAATATTACACCTTTCAGTTATGGAAGAAATTTTAGAA  1091

seq1  AGCAAGTCCAGAAGATAAGAGCTGATCACATTGGCAGAATGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCCAGAAGATAAGAGCTGATCACATTGGCAGAATGAATTC  1137


seq1: chr10_16615949_16617100
seq2: B6Ng01-323K06.g_66_1220

seq1  GAATTCTGTTGCATTCTCCAGAGAATAACTTCCTTTCTTACCCTTATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGCATTCTCCAGAGAATAACTTCCTTTCTTACCCTTATGGG  50

seq1  CAATTTTATCAGCCCGGTACACCTTCTACCTTTCGTATGCTTAAAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTATCAGCCCGGTACACCTTCTACCTTTCGTATGCTTAAAAGAGA  100

seq1  AAAAAGAGAGGAGAGGAATAAGAGCTATGCATATTCCGGATGCAATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGAGGAGAGGAATAAGAGCTATGCATATTCCGGATGCAATTGTT  150

seq1  TAGGCCTTAAAAACCCTTCCAAATATTTTTCATTTTCATTTACTGCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTTAAAAACCCTTCCAAATATTTTTCATTTTCATTTACTGCCTAA  200

seq1  ACTTGCAGGACCTATAACCCAATATATCTGATCCCACACAACTGAGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAGGACCTATAACCCAATATATCTGATCCCACACAACTGAGAGGT  250

seq1  AGGCTTTTGAAAAGGGAATAAAGGGCAAATGAAATATTAAATCTGATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGAAAAGGGAATAAAGGGCAAATGAAATATTAAATCTGATTTC  300

seq1  TGCAGGTGAGTAACCTGAGGAAAGAAAAGCGACTGCATTTCACATGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGAGTAACCTGAGGAAAGAAAAGCGACTGCATTTCACATGGAAG  350

seq1  AAAGTGTCCCTCAGACCTGCTGTGCTCACCACGCTAAGTCAGCTCACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCCCTCAGACCTGCTGTGCTCACCACGCTAAGTCAGCTCACCAT  400

seq1  CAAGGCTCATCACGTGAAACTGTAACTAAACTTGCAAGATCGCTTTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCATCACGTGAAACTGTAACTAAACTTGCAAGATCGCTTTATTC  450

seq1  CTAGAATAAATGAACTTGCTTTTCGGTTTCCTTTTTCGTTTTCTTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATAAATGAACTTGCTTTTCGGTTTCCTTTTTCGTTTTCTTTTTAT  500

seq1  AGGTTTATCACAGTGAAAATTCGTACAACATGGCATCAGACTGCACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATCACAGTGAAAATTCGTACAACATGGCATCAGACTGCACATCT  550

seq1  GAAGATAAAGGATTAGCATTAAAGAATTAAAGGCATATTTGATATTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAAAGGATTAGCATTAAAGAATTAAAGGCATATTTGATATTATAA  600

seq1  AATGACAAAAAATTGTGATATGCCATAATTCACACCCACAAGTATCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAAAAATTGTGATATGCCATAATTCACACCCACAAGTATCTATA  650

seq1  TTTAACAATCAGGAATATAAAAAAAAATGACTGCATTGTTGGAAACACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAATCAGGAATATAAAAAAAAATGACTGCATTGTTGGAAACACCT  700

seq1  GGGAATTTCATGTCTTCATTCAAAATGTACAGATGAATAAGCCCTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTCATGTCTTCATTCAAAATGTACAGATGAATAAGCCCTTAAGA  750

seq1  GGAAATGAGCAAGTGCAAGTAGTTTGGTAGTGGTAGATAATCACTGGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAGCAAGTGCAAGTAGTTTGGTAGTGGTAGATAATCACTGGTCC  800

seq1  ACCTACTCAGTCATGCTGAGTCCACGTGTAAGTCATATAATTATTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTCAGTCATGCTGAGTCCACGTGTAAGTCATATAATTATTTCCTT  850

seq1  AGTCTCCTCTTTCTCTTTCCTTTAATTTATATTCAGAGAATAAAAAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTCTTTCTCTTTCCTTTAATTTATATTCAGAGAATAAAAAAGAT  900

seq1  CCTCAAAACATTCTCTCATTAGAGATACGGTAAGATAATACAATCAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAACATTCTCTCATTAGAGATACGGTAAGATAATACAATCAGAAT  950

seq1  AACTTTTGGAGTCAGTATCTAACAATGACAACTGCTAAGAAGCATATTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGGAGTCAGTATCTAACAATGACAACTGCTAAGAAGCATATTCA  1000

seq1  CTCCGTTATCATCTTCAATTACAGGGTGGTTTTTC-TCATGTCATCTCTA  1049
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCCGTTATCATCTTCAATTACAGGGTGGTTTTTCTTCATGTCATCTCTA  1050

seq1  AGAACTCTCTTCCTGGCTTCATACCTGAAG-AACACCAGCCCACAATCTT  1098
      ||||||||||| ||||||||||| |||||| |||| |||||||| |||||
seq2  AGAACTCTCTT-CTGGCTTCATA-CTGAAGAAACATCAGCCCAC-ATCTT  1097

seq1  TCTACTGA-CTGTTTCACCTTAGATAG-TCCATATATATACACATGCATG  1146
      |||||||| |||||  ||||   |||| ||||||||||||||||||||||
seq2  TCTACTGACCTGTTCAACCTAGAATAGTTCCATATATATACACATGCATG  1147

seq1  --ATGAAT  1152
        ||||||
seq2  GAATGAAT  1155


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