BAC Information

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BAC

Clone NameB6Ng01-324G10
Chromosome10 (Build37)
Map Location 91,268,604 - 91,375,723
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G10.bB6Ng01-324G10.g
ACCGA112725GA112726
length1,1371,181
definitionB6Ng01-324G10.b B6Ng01-324G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,268,604 - 91,269,749)(91,374,540 - 91,375,723)
sequence
gaattctctatttaggctcctggtttcatgaacttcaatccaccatggat
gagagttcacttatggacaactaggactgagaaatggggtggtgcctgta
ccatgctgagtcaatctttcccttttcttcatcctacagcccagggcatg
atgctgtctacatccagagtgagtcttcttcactctggtaaacctacccc
ttccatacctacctgtgtgccttaccaatctactaggggcttttaaatgt
tattaactgggcaggattaatttcatttggtaagattggaagacatgtat
tttctacactttaaaaatacctatagataggcatttttcatcatcttcag
aggttcaaggatactgcactgtgtaccattttagaggaatgttcctcttc
ctcgctattgtggatatcaggtattcttttcatctttcccctttggctct
ccaaagacaagaatccacattgttcccaatatcttagaacctggaaacaa
ggggaaggggtgattcgctcttaaatttaccaggtttatgttgaaaaatc
atcacaggataaggggccacagaaacgttattgaacaataattggaaata
ttgtaaagaaaagatttataatatgctgggcagagctttgagacctaatg
acattctatgatggataactgtgatgtcataagggccataaggcaggtcc
caagggttgatccactatctgctgcttacattttattccattctgttcca
tactctctgactcgatggatttgatcttaactttcttatctctgaaatgg
acataacacataacagttgcctctgaatgtgaggagcgagttggggagat
agggatcgtcacctgatccccagaacccacatggtgagacaagggagaac
tgattgctgcaaggtgtttctgacttttacacatgtgctatgacatatgc
agacacaaacatacagcaccctcacacacagagaaagagaaaggagagag
agataaatggtttaagtagtgactatcacagcagttggtatgtaggaaca
gcctacatacccctgattttcagtttctaggcattaaaaacatgtggatt
ctggcactgaatagccagaaagggaggtgagccggat
gaattcatgaaatagtaactattcaggaggaaaaggttgaaagagttgtg
atattattgtcttcaaagatcaaaggacaaaatgaattgttctcatctct
actcccaaagcaaaacaaaggcatatacataccctcagacaaggcagtaa
atgtgcaagaaggtctcagggatgattgacatacaagaacaaataatcca
gaaagatctagaagaatctgtcttcattgccatttttatgtcataaaatt
ttctcacactaaaactacagtggagaatcatatataaaaaaaaagcttgc
cgaataatatcataaaatgtaaatactgttctcaaagataaatactctca
aaacttgggcaaatagttcttggatacttctctttataatgtaataagac
aatatgcaattgttaatagttatctgtcatatcagcaatcttaagtgtgt
ttgcatattggcaatatctcttttattcttttatctgcctgtcaatttaa
ttttattgctgtatagagtgaaagaacaagagactgtgagaccacttcag
aatatctgcatccatcctaaccagttgcctaatgataaacttttctgtta
ttgcccagtgtccggtgaataccaacaactctgcaatgactatttttttc
cttttatatgcaaaatgtaaaaatatttctctaggaaaaagcttcaaaga
agaattatttcaaaaaattaattgaaattctaatattgcaatctgaatga
tgtgtccatttctacacactcttgtgagtatagaatattacagtgttgag
ataaaaggatattgtccccttccttatcactttacctattaggtactgaa
taatttgcaagttttgaagcccaaaaatggctttctttttctgtttttac
tccttttccttctcttggtttttctttttattattagtatgtaggatctc
ttttttgtgtgactgtatatcacttgtattaaacattgcttaccagtagt
gttccattttaacttgacaaaatttaaacatgcagctcactcaattcacc
gggaccccacagctttagttcttcttcttttcccattacttcttgcttca
aacaccggtcatctagtgtgaagaaatagagaagtattttttctaattaa
tctctagttagcctctatctttgaagaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91268604_91269749
seq2: B6Ng01-324G10.b_41_1177

seq1  GAATTCTCTATTTAGGCTCCTGGTTTCATGAACTTCAATCCACCATGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTAGGCTCCTGGTTTCATGAACTTCAATCCACCATGGAT  50

seq1  GAGAGTTCACTTATGGACAACTAGGACTGAGAAATGGGGTGGTGCCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCACTTATGGACAACTAGGACTGAGAAATGGGGTGGTGCCTGTA  100

seq1  CCATGCTGAGTCAATCTTTCCCTTTTCTTCATCCTACAGCCCAGGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGAGTCAATCTTTCCCTTTTCTTCATCCTACAGCCCAGGGCATG  150

seq1  ATGCTGTCTACATCCAGAGTGAGTCTTCTTCACTCTGGTAAACCTACCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTACATCCAGAGTGAGTCTTCTTCACTCTGGTAAACCTACCCC  200

seq1  TTCCATACCTACCTGTGTGCCTTACCAATCTACTAGGGGCTTTTAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACCTACCTGTGTGCCTTACCAATCTACTAGGGGCTTTTAAATGT  250

seq1  TATTAACTGGGCAGGATTAATTTCATTTGGTAAGATTGGAAGACATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTGGGCAGGATTAATTTCATTTGGTAAGATTGGAAGACATGTAT  300

seq1  TTTCTACACTTTAAAAATACCTATAGATAGGCATTTTTCATCATCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACACTTTAAAAATACCTATAGATAGGCATTTTTCATCATCTTCAG  350

seq1  AGGTTCAAGGATACTGCACTGTGTACCATTTTAGAGGAATGTTCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAAGGATACTGCACTGTGTACCATTTTAGAGGAATGTTCCTCTTC  400

seq1  CTCGCTATTGTGGATATCAGGTATTCTTTTCATCTTTCCCCTTTGGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTATTGTGGATATCAGGTATTCTTTTCATCTTTCCCCTTTGGCTCT  450

seq1  CCAAAGACAAGAATCCACATTGTTCCCAATATCTTAGAACCTGGAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACAAGAATCCACATTGTTCCCAATATCTTAGAACCTGGAAACAA  500

seq1  GGGGAAGGGGTGATTCGCTCTTAAATTTACCAGGTTTATGTTGAAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGGGTGATTCGCTCTTAAATTTACCAGGTTTATGTTGAAAAATC  550

seq1  ATCACAGGATAAGGGGCCACAGAAACGTTATTGAACAATAATTGGAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGATAAGGGGCCACAGAAACGTTATTGAACAATAATTGGAAATA  600

seq1  TTGTAAAGAAAAGATTTATAATATGCTGGGCAGAGCTTTGAGACCTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGAAAAGATTTATAATATGCTGGGCAGAGCTTTGAGACCTAATG  650

seq1  ACATTCTATGATGGATAACTGTGATGTCATAAGGGCCATAAGGCAGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTATGATGGATAACTGTGATGTCATAAGGGCCATAAGGCAGGTCC  700

seq1  CAAGGGTTGATCCACTATCTGCTGCTTACATTTTATTCCATTCTGTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTGATCCACTATCTGCTGCTTACATTTTATTCCATTCTGTTCCA  750

seq1  TACTCTCTGACTCGATGGATTTGATCTTAACTTTCTTATCTCTGAAATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTGACTCGATGGATTTGATCTTAACTTTCTTATCTCTGAAATGG  800

seq1  ACATAACACATAACAGTTGCCTCTGAATGTGAGGAGCGAGTTGGGGAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACACATAACAGTTGCCTCTGAATGTGAGGAGCGAGTTGGGGAGAT  850

seq1  AGGGATCGTCACCTGATCCCCAGAACCCACATGGTGAGACAAGGGAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCGTCACCTGATCCCCAGAACCCACATGGTGAGACAAGGGAGAAC  900

seq1  TGATTGCTGCAAGGTGTTTCTGACTTTTACACATGTGCTATGACATATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCTGCAAGGTGTTTCTGACTTTTACACATGTGCTATGACATATGC  950

seq1  AGACACAAACATACAGCACCCTCACACACAGAGAAAGAGAAAGGGAGAGA  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGACACAAACATACAGCACCCTCACACACAGAGAAAGAGAAA-GGAGAGA  999

seq1  GAGAATAAATGGTTTAAAGTAGGTGACTATCACAGCAGTTGGTATGTAGG  1050
      ||| ||||||||||| ||||| ||||||||||||||||||||||||||||
seq2  GAG-ATAAATGGTTT-AAGTA-GTGACTATCACAGCAGTTGGTATGTAGG  1046

seq1  AACAGCCTACATACCCCTGATTTTTCAGTTTCTAAGGCATTAAAAACAAT  1100
      |||||||||||||||||||| |||||||||||| ||||||||||||| ||
seq2  AACAGCCTACATACCCCTGA-TTTTCAGTTTCT-AGGCATTAAAAAC-AT  1093

seq1  GTGGATTCTTGGCACTGATAAGCCAGAAAGGGAAGGTGAGCGGGAT  1146
      |||||||| |||||||||  |||||||||||| |||||||| ||||
seq2  GTGGATTC-TGGCACTGAATAGCCAGAAAGGG-AGGTGAGCCGGAT  1137

seq1: chr10_91374540_91375723
seq2: B6Ng01-324G10.g_65_1245 (reverse)

seq1  AGCTTCTTAAAAG---TAGGCTACTTAGAGATAAAATGTTAGAAAACATA  47
      |||||||| ||||    ||||||  ||||||| ||   |||||||| |||
seq2  AGCTTCTTCAAAGATAGAGGCTAACTAGAGATTAA---TTAGAAAAAATA  47

seq1  CTTCTCTA--TCTTCACACTTAGAATGAACGGGTGTTTGAAGGCAG-AGT  94
      ||||||||  ||||||||| ||| ||| || |||||||||||  || |||
seq2  CTTCTCTATTTCTTCACAC-TAG-ATG-ACCGGTGTTTGAAGCAAGAAGT  94

seq1  AATGGGGAAAAGAAGGAAGAACTAAAGCTGTGGTGTCCCGGTGAATTTGA  144
      ||| |||||||||| |||||||||||||||||| ||||||||||| ||||
seq2  AAT-GGGAAAAGAA-GAAGAACTAAAGCTGTGGGGTCCCGGTGAA-TTGA  141

seq1  GTGAGCTGCATGGTTTAATTTTGTCAAGTTAAAATGGAACACTACTGGTA  194
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGCATGTTTAAATTTTGTCAAGTTAAAATGGAACACTACTGGTA  191

seq1  AGCAATGTTTAATACAAGTGATATACAGTCACACAAAAAAGAGATCCTAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGTTTAATACAAGTGATATACAGTCACACAAAAAAGAGATCCTAC  241

seq1  ATACTAATAATAAAAAGAAAAACCAAGAGAAGGAAAAGGAGTAAAAACAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATAATAAAAAGAAAAACCAAGAGAAGGAAAAGGAGTAAAAACAG  291

seq1  AAAAAGAAAGCCATTTTTTGGCTTCAAAACTTGCAAATTATTCAGTACCT  344
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGCCATTTTTGGGCTTCAAAACTTGCAAATTATTCAGTACCT  341

seq1  AATAGGTAAAGTGATAAGGAAGGGGACAATATCCTTTTATCTCAACACTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTAAAGTGATAAGGAAGGGGACAATATCCTTTTATCTCAACACTG  391

seq1  TAATATTCTATACTCACAAGAGTGTGTAGAAATGGACACATCATTCAGAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCTATACTCACAAGAGTGTGTAGAAATGGACACATCATTCAGAT  441

seq1  TGCAATATTAGAATTTCAATTAATTTTTTGAAATAATTCTTCTTTGAAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTAGAATTTCAATTAATTTTTTGAAATAATTCTTCTTTGAAGC  491

seq1  TTTTTCCTAGAGAAATATTTTTACATTTTGCATATAAAAGGAAAAAAATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTAGAGAAATATTTTTACATTTTGCATATAAAAGGAAAAAAATA  541

seq1  GTCATTGCAGAGTTGTTGGTATTCACCGGACACTGGGCAATAACAGAAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCAGAGTTGTTGGTATTCACCGGACACTGGGCAATAACAGAAAA  591

seq1  GTTTATCATTAGGCAACTGGTTAGGATGGATGCAGATATTCTGAAGTGGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCATTAGGCAACTGGTTAGGATGGATGCAGATATTCTGAAGTGGT  641

seq1  CTCACAGTCTCTTGTTCTTTCACTCTATACAGCAATAAAATTAAATTGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTCTCTTGTTCTTTCACTCTATACAGCAATAAAATTAAATTGAC  691

seq1  AGGCAGATAAAAGAATAAAAGAGATATTGCCAATATGCAAACACACTTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATAAAAGAATAAAAGAGATATTGCCAATATGCAAACACACTTAA  741

seq1  GATTGCTGATATGACAGATAACTATTAACAATTGCATATTGTCTTATTAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTGATATGACAGATAACTATTAACAATTGCATATTGTCTTATTAC  791

seq1  ATTATAAAGAGAAGTATCCAAGAACTATTTGCCCAAGTTTTGAGAGTATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGAGAAGTATCCAAGAACTATTTGCCCAAGTTTTGAGAGTATT  841

seq1  TATCTTTGAGAACAGTATTTACATTTTATGATATTATTCGGCAAGCTTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGAGAACAGTATTTACATTTTATGATATTATTCGGCAAGCTTTT  891

seq1  TTTTTATATATGATTCTCCACTGTAGTTTTAGTGTGAGAAAATTTTATGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATATGATTCTCCACTGTAGTTTTAGTGTGAGAAAATTTTATGA  941

seq1  CATAAAAATGGCAATGAAGACAGATTCTTCTAGATCTTTCTGGATTATTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATGGCAATGAAGACAGATTCTTCTAGATCTTTCTGGATTATTT  991

seq1  GTTCTTGTATGTCAATCATCCCTGAGACCTTCTTGCACATTTACTGCCTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTATGTCAATCATCCCTGAGACCTTCTTGCACATTTACTGCCTT  1041

seq1  GTCTGAGGGTATGTATATGCCTTTGTTTTGCTTTGGGAGTAGAGATGAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGGGTATGTATATGCCTTTGTTTTGCTTTGGGAGTAGAGATGAGA  1091

seq1  ACAATTCATTTTGTCCTTTGATCTTTGAAGACAATAATATCACAACTCTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCATTTTGTCCTTTGATCTTTGAAGACAATAATATCACAACTCTT  1141

seq1  TCAACCTTTTCCTCCTGAATAGTTACTATTTCATGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTTTCCTCCTGAATAGTTACTATTTCATGAATTC  1181