BAC Information

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BAC

Clone NameB6Ng01-324I15
Chromosome10 (Build37)
Map Location 126,046,449 - 126,171,700
singlet/doubletdoublet
Overlap genenone
Upstream geneLrig3, LOC100043547
Downstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324I15.bB6Ng01-324I15.g
ACCGA112827GA112828
length1,1991,095
definitionB6Ng01-324I15.b B6Ng01-324I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,046,449 - 126,047,622)(126,170,609 - 126,171,700)
sequence
gaattcctctcctctgacagtgtttctctggtgtctcattcaagaagcgt
ctctcttccaacaggcacaatgctgcatgctgtagctgtaacagtaggga
agaggaaatatgcccatggtgagtcagtcaagtgctccctcctggaccct
gccccctgagctcactaacagcagcacggacccctggagcatccccagtc
ctgtttctactctgaacctaactcttttggtattctattcctccttggcc
ttccaacaaatatttctcttttgacctggaacagtttctgttgcctgcat
ccaagtaaccccagcctgactctagaggcattcactctctctgtcctcag
tagcatcccccacactgcattgtatcacctcaggatggtttccaccgctg
ctgtggaaaggaaatagaaaactgaacagaatgtatccatcagctttgcc
ggtcaggctaaatgtcatgtgacgtttagcagctgttcctgatactgtgt
tgcattctgtgtgtgtttataaagtttgcccaccacttatggctcctcct
ggggagcagcacctccatccttgatttacattcttgtcagagccacccat
acttcaattctgcacgagctattgttgcatcctcttactcctaaaagaat
gggaatagctagcggaaaagaaggaaaagctacagtgtatttctttgcaa
gtaacagggaagattaacaaaaaaaggctgcacctggaacatcaagagat
gaagaaggaaaataaaaagactttattaccacctgcttatttaattcacc
ccagactaaagctattcaacatgcctagcacggctgggttttattattat
tattattatttattactattattattattattagtttgcttgtttttaat
ataaaagccattgcctgatacagagctcaacacaagactgtaagcatctt
tctagtggtcttaccatgagccatttggtacctacttctcactctagata
atatgggatttgtgctgaatgccaccatccagagacccccaaattcctaa
gacttgtggaaattaagaatttcgcccaccgctaacaacgccctaatttc
acgcacaatggaagagcgttttctattcgttcagcacctgtttttcctct
ctctggagaaagaaaaccactcaaagggcgggcgttgattctatataac
gaattccccatgagaggagcttgttagaataggtgagttgataggttttc
tctcactgtttgtccccgaggtttggtcttttgctgtgtattgtaatgtt
aagtgagggtacccaaggtctggttgccccagtgctgagagagtctgcaa
gtagacccaagtgatactatgtgaccctgcccacaaattatttctgattg
gtaaataaagatgctgacagctaatagctggacagaagatacataggtgg
gttttaggagttccaagatggtggttggaagagaaccacaaggaaaagaa
ggtgaaggaggagagagaagccacccgtgggttaggttagtcatgaaaac
atggccgctagggctggccatttggagttaagagcagggttatagatagt
gaatagattctaatagcatagagggtggatattggcccagctcttgtgct
gtttaaagcctattttaaatataaggttctgtgtgtcttttacctaggaa
cccccctagattgggattaaaaacttctacagcgtactgtgttggtagac
actcctattggcttatttaagaagactagggtgaaaaaccatatttctaa
tgtcacacatactagttagaaatcattagccttgactttgacattcagga
aatagaggacaacactacacagtggttgacaataatgaatagctctattt
taaagacagaaatctctattttactctaacagataattaatcaagtacat
tctcttaaactacagtctgaacactcataataaatacatatatcaagcaa
aacgtcacctccatgaaggcggtgcaagttctctcctgttttaggtgttg
gggacaaacccaaggctttggcttgtgaggtaagcattgcactactgctc
taaatccctaacccccaccacccttgttctcccttctcctactgcgctct
ctctctctctctctctctctctctctctctctccctctccctctatcctg
gtcactctctctgtctttccctttcttctgatggagcacttgagagaaaa
ccacgtgacattgggttaccctgtacgggctaagtttttgtcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126046449_126047622
seq2: B6Ng01-324I15.b_47_1245

seq1  GAATTCCTCTCCTCTGACAGTGTTTCTCTGGTGTCTCATTCAAGAAGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCCTCTGACAGTGTTTCTCTGGTGTCTCATTCAAGAAGCGT  50

seq1  CTCTCTTCCAACAGGCACAATGCTGCATGCTGTAGCTGTAACAGTAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCAACAGGCACAATGCTGCATGCTGTAGCTGTAACAGTAGGGA  100

seq1  AGAGGAAATATGCCCATGGTGAGTCAGTCAAGTGCTCCCTCCTGGACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATATGCCCATGGTGAGTCAGTCAAGTGCTCCCTCCTGGACCCT  150

seq1  GCCCCCTGAGCTCACTAACAGCAGCACGGACCCCTGGAGCATCCCCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCTGAGCTCACTAACAGCAGCACGGACCCCTGGAGCATCCCCAGTC  200

seq1  CTGTTTCTACTCTGAACCTAACTCTTTTGGTATTCTATTCCTCCTTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTACTCTGAACCTAACTCTTTTGGTATTCTATTCCTCCTTGGCC  250

seq1  TTCCAACAAATATTTCTCTTTTGACCTGGAACAGTTTCTGTTGCCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACAAATATTTCTCTTTTGACCTGGAACAGTTTCTGTTGCCTGCAT  300

seq1  CCAAGTAACCCCAGCCTGACTCTAGAGGCATTCACTCTCTCTGTCCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAACCCCAGCCTGACTCTAGAGGCATTCACTCTCTCTGTCCTCAG  350

seq1  TAGCATCCCCCACACTGCATTGTATCACCTCAGGATGGTTTCCACCGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCCCCCACACTGCATTGTATCACCTCAGGATGGTTTCCACCGCTG  400

seq1  CTGTGGAAAGGAAATAGAAAACTGAACAGAATGTATCCATCAGCTTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAAAGGAAATAGAAAACTGAACAGAATGTATCCATCAGCTTTGCC  450

seq1  GGTCAGGCTAAATGTCATGTGACGTTTAGCAGCTGTTCCTGATACTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGCTAAATGTCATGTGACGTTTAGCAGCTGTTCCTGATACTGTGT  500

seq1  TGCATTCTGTGTGTGTTTATAAAGTTTGCCCACCACTTATGGCTCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTGTGTGTGTTTATAAAGTTTGCCCACCACTTATGGCTCCTCCT  550

seq1  GGGGAGCAGCACCTCCATCCTTGATTTACATTCTTGTCAGAGCCACCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCAGCACCTCCATCCTTGATTTACATTCTTGTCAGAGCCACCCAT  600

seq1  ACTTCAATTCTGCACGAGCTATTGTTGCATCCTCTTACTCCTAAAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATTCTGCACGAGCTATTGTTGCATCCTCTTACTCCTAAAAGAAT  650

seq1  GGGAATAGCTAGCGGAAAAGAAGGAAAAGCTACAGTGTATTTCTTTGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAGCTAGCGGAAAAGAAGGAAAAGCTACAGTGTATTTCTTTGCAA  700

seq1  GTAACAGGGAAGATTAACAAAAAAAGGCTGCACCTGGAACATCAAGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGGGAAGATTAACAAAAAAAGGCTGCACCTGGAACATCAAGAGAT  750

seq1  GAAGAAGGAAAATAAAAAGACTTTATTACCACCTGCTTATTTAATTCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGAAAATAAAAAGACTTTATTACCACCTGCTTATTTAATTCACC  800

seq1  CCAGACTAAAGCTATTCAACATGCCTAGCACGGCTGGGTTTTATTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTAAAGCTATTCAACATGCCTAGCACGGCTGGGTTTTATTATTAT  850

seq1  TATTATTATTTATTACTATTATTATTATTATTAGTTTGCTTGTTTTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTATTACTATTATTATTATTATTAGTTTGCTTGTTTTTAAT  900

seq1  ATAAAAGCCATTGCCTGATACAGAGCTCAACACAAGACTGTAAGCATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCCATTGCCTGATACAGAGCTCAACACAAGACTGTAAGCATCTT  950

seq1  TCTAGTGGTCTTACCATGAGCCATTT-GTACCTACTTCTCACTCTAGATA  999
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  TCTAGTGGTCTTACCATGAGCCATTTGGTACCTACTTCTCACTCTAGAT-  999

seq1  AATAT-GGATTTGTGCTGAATGCCA-CATCCAGAGACCCCCAAA-TCCTA  1046
      ||||| ||||||||||||||||||| |||||||||||||||||| |||||
seq2  AATATGGGATTTGTGCTGAATGCCACCATCCAGAGACCCCCAAATTCCTA  1049

seq1  AGACTTGT-GAAAATAAGAATTTCGCCCA-CGCTA--CACGCCTTA--TT  1090
      |||||||| |||| ||||||||||||||| |||||   ||||| ||  ||
seq2  AGACTTGTGGAAATTAAGAATTTCGCCCACCGCTAACAACGCCCTAATTT  1099

seq1  CACGCAC-ATG--AGAGCG-TTTCTATTCGTTCAGCA-CTGTTT----CC  1131
      ||||||| |||  |||||| ||||||||||||||||| ||||||     |
seq2  CACGCACAATGGAAGAGCGTTTTCTATTCGTTCAGCACCTGTTTTTCCTC  1149

seq1  TCTCTGGAG-AAGAAA--CA-TCAAAGG--CGGCGTTGATTCTAT-TAAC  1174
      ||||||||| ||||||  || |||||||   |||||||||||||| ||||
seq2  TCTCTGGAGAAAGAAAACCACTCAAAGGGCGGGCGTTGATTCTATATAAC  1199

seq1: chr10_126170609_126171700
seq2: B6Ng01-324I15.g_67_1161 (reverse)

seq1  ATTGACAAAAAC-TAACCCGTACGGGGTAAACCAATGTCACGT-GTTTTC  48
      |||||||||||| || ||||||| |||||| |||||||||||| ||||||
seq2  ATTGACAAAAACTTAGCCCGTACAGGGTAACCCAATGTCACGTGGTTTTC  50

seq1  TCTCAAGTGCTCAATCAGAAGAAAGGGAAAGACAGAGAGAGTGA-CAGGA  97
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  TCTCAAGTGCTCCATCAGAAGAAAGGGAAAGACAGAGAGAGTGACCAGGA  100

seq1  TAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC  150

seq1  GCAGTAGGAGAAGGGAGAACAAGGGTGGTGGGGGTTAGGGATTTAGAGCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGGAGAAGGGAGAACAAGGGTGGTGGGGGTTAGGGATTTAGAGCA  200

seq1  GTAGTGCAATGCTTACCTCACAAGCCAAAGCCTTGGGTTTGTCCCCAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCAATGCTTACCTCACAAGCCAAAGCCTTGGGTTTGTCCCCAACA  250

seq1  CCTAAAACAGGAGAGAACTTGCACCGCCTTCATGGAGGTGACGTTTTGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACAGGAGAGAACTTGCACCGCCTTCATGGAGGTGACGTTTTGCT  300

seq1  TGATATATGTATTTATTATGAGTGTTCAGACTGTAGTTTAAGAGAATGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATGTATTTATTATGAGTGTTCAGACTGTAGTTTAAGAGAATGTA  350

seq1  CTTGATTAATTATCTGTTAGAGTAAAATAGAGATTTCTGTCTTTAAAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTAATTATCTGTTAGAGTAAAATAGAGATTTCTGTCTTTAAAATA  400

seq1  GAGCTATTCATTATTGTCAACCACTGTGTAGTGTTGTCCTCTATTTCCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATTCATTATTGTCAACCACTGTGTAGTGTTGTCCTCTATTTCCTG  450

seq1  AATGTCAAAGTCAAGGCTAATGATTTCTAACTAGTATGTGTGACATTAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAAAGTCAAGGCTAATGATTTCTAACTAGTATGTGTGACATTAGA  500

seq1  AATATGGTTTTTCACCCTAGTCTTCTTAAATAAGCCAATAGGAGTGTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTTTTTCACCCTAGTCTTCTTAAATAAGCCAATAGGAGTGTCTA  550

seq1  CCAACACAGTACGCTGTAGAAGTTTTTAATCCCAATCTAGGGGGGTTCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACAGTACGCTGTAGAAGTTTTTAATCCCAATCTAGGGGGGTTCCT  600

seq1  AGGTAAAAGACACACAGAACCTTATATTTAAAATAGGCTTTAAACAGCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAGACACACAGAACCTTATATTTAAAATAGGCTTTAAACAGCAC  650

seq1  AAGAGCTGGGCCAATATCCACCCTCTATGCTATTAGAATCTATTCACTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGGGCCAATATCCACCCTCTATGCTATTAGAATCTATTCACTAT  700

seq1  CTATAACCCTGCTCTTAACTCCAAATGGCCAGCCCTAGCGGCCATGTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACCCTGCTCTTAACTCCAAATGGCCAGCCCTAGCGGCCATGTTTT  750

seq1  CATGACTAACCTAACCCACGGGTGGCTTCTCTCTCCTCCTTCACCTTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTAACCTAACCCACGGGTGGCTTCTCTCTCCTCCTTCACCTTCTT  800

seq1  TTCCTTGTGGTTCTCTTCCAACCACCATCTTGGAACTCCTAAAACCCACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTGGTTCTCTTCCAACCACCATCTTGGAACTCCTAAAACCCACC  850

seq1  TATGTATCTTCTGTCCAGCTATTAGCTGTCAGCATCTTTATTTACCAATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCTTCTGTCCAGCTATTAGCTGTCAGCATCTTTATTTACCAATC  900

seq1  AGAAATAATTTGTGGGCAGGGTCACATAGTATCACTTGGGTCTACTTGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATTTGTGGGCAGGGTCACATAGTATCACTTGGGTCTACTTGCA  950

seq1  GACTCTCTCAGCACTGGGGCAACCAGACCTTGGGTACCCTCACTTAACAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCTCAGCACTGGGGCAACCAGACCTTGGGTACCCTCACTTAACAT  1000

seq1  TACAATACACAGCAAAAGACCAAACCTCGGGGACAAACAGTGAGAGAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACACAGCAAAAGACCAAACCTCGGGGACAAACAGTGAGAGAAAA  1050

seq1  CCTATCAACTCACCTATTCTAACAAGCTCCTCTCATGGGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCAACTCACCTATTCTAACAAGCTCCTCTCATGGGGAATTC  1095