BAC Information

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BAC

Clone NameB6Ng01-324M12
Chromosome10 (Build37)
Map Location 123,680,649 - 123,681,849
singlet/doubletsinglet
Overlap genenone
Upstream geneAI851790
Downstream gene4930503E24Rik, LOC671416, Slc16a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324M12.bB6Ng01-324M12.g
ACCGA113009GA113010
length1,1661,188
definitionB6Ng01-324M12.b B6Ng01-324M12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtttagttctatatgccattattttttattgggttgtttgg
tcttttagaaattaacttcttgagttctttatatattttggatattaacc
ctctatcggatgtggggtttgtgaagattttttttcccaatctgtaggtt
gcccacttgtcttatcaactatgtcctttgccttgcagaagttttccagt
ttcatgaggtcccatttatcaattgttgatcttagagcatgaaccattgg
agttctgtttctgaaatttccccctgtaccaatgagttcaacactctttc
ccactttctcttctattagattcagtgtatttggttttatgttgaggttc
tggatccacttggacttgaactttgtacaaggtgacaaatatgggtcaat
tttcattcttctacatacatacagccagttagaccagcaccatttattga
agatgctttctttttttccattgtatatttttgtcatctttgtcaaaggt
caggtgactgtgagtgtctggttttatttctgggactacaattcaattct
attgatcaacatatctgtctctgtaccaataccatgctgttttttttttt
gtttgttttttttatcactattgctctgtagtaaagcttgaggtcaagga
tggtaattcccccagctgttcttttattgttaagaattgttttcactatt
ctgggtttttttttttttttttttttgcctttccagatagaattcaagaa
ttgctctttccatgtctttgaaaaatttgtgttgaaattttgatggggat
tgaattgaatatatagaattgccttttggtagagatggccatttttccta
tgttaattctgccaatccatgaagcatggggagatttcttccattttctg
agaccttgagagacttgaaagttatttgtcatacaggtctttcacttgtt
ttggttagagttaccccagatattttatgcttatttgtgctattgtgaag
ggacttgtttccctaattctttcttcagctgtttacttggtataaagagc
tactgaattaatgagtaatttatatctgcacatgctgagtgttatcagct
gggaagtcctgaatgacttgaagtcgtagtattcagtactcgcaatcatc
cgtagtctctaccaag

gaattcctctttgtttacattttccctttttattcttttgcacttgcttt
taagatccccacattccttgagttccaaaatgggagcactcagctccaga
tccagaaaagaaagactagcaaaggcagacagagtgatgcagggagttgg
aaaaatatggccaagattcagggaattggaggtaagaatgagagcaaatt
ggactgtgggaagaactactagagttatgagaaaaaaaaatcttattatt
attatttttttaacttttttttaattagatattttctttatttacatttc
aaatgtatcccctttcctggtttcccctctgaaaaccccctatcctatcc
ctctgctcaccaacctacccactcccacttcctggccctggcattccctg
tcctggggcatagagcagagaagaaatatttcttaggtggacgattctgg
ggagaggttgtttgtcaaacattctacttggacatgtttcttagtcaaaa
ttcatgccagctagaaaggaagcaaagttaatggcatagcatgggtgtgt
tcaacaaaagtccccagaagacaggtataggaaaatgaaatgttcctaca
acaaaggaggtggccaagaaacagtgaggggcaaagaaggaaaatataaa
caaggtctccacaaagacaactgaatgtggcatcaatacaaattagaact
ccacaatttactcaagagcaggtatgcaaacatgtgagacctcaatcaga
attgccccatatctaactcaatggaaattttcaaagaaagaatcttgggg
cctaacataacgctgaagagagcaggaggcttcctgccatcagacagact
gaggcctttctgaaaaaaaaaaagttaagagcaagggaattcttgatatc
aattctcatagcagcttgcaaggtttactgaaaggggctgcaggttagtt
ctaggaggccaagaactgtagattagtgcagaagaccaactgtgatgaca
gaccagaagaagtcaatgaagcttggctattttgtcatgaaatactcctg
ctagtacaataaacatttaataaaatttatacaagtgtggtttgcagcaa
gctaactactatgagtgagattccattgttaactgaattttattcgaatc
tgaacttcattattagaataattcgtccccaagtttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123680649_123681849
seq2: B6Ng01-324M12.g_65_1252

seq1  GAATTCCTCTTTGTTTACATTTTCCCTTTTTATTCTTTTGCACTTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTGTTTACATTTTCCCTTTTTATTCTTTTGCACTTGCTTT  50

seq1  TAAGATCCCCACATTCCTTGAGTTCCAAAATGGGAGCACTCAGCTCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCCCCACATTCCTTGAGTTCCAAAATGGGAGCACTCAGCTCCAGA  100

seq1  TCCAGAAAAGAAAGACTAGCAAAGGCAGACAGAGTGATGCAGGGAGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAAGAAAGACTAGCAAAGGCAGACAGAGTGATGCAGGGAGTTGG  150

seq1  AAAAATATGGCCAAGATTCAGGGAATTGGAGGTAAGAATGAGAGCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGGCCAAGATTCAGGGAATTGGAGGTAAGAATGAGAGCAAATT  200

seq1  GGACTGTGGGAAGAACTACTAGAGTTATGAGAAAAAAAAATCTTATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTGGGAAGAACTACTAGAGTTATGAGAAAAAAAAATCTTATTATT  250

seq1  ATTATTTTTTTAACTTTTTTTTAATTAGATATTTTCTTTATTTACATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTTTAACTTTTTTTTAATTAGATATTTTCTTTATTTACATTTC  300

seq1  AAATGTATCCCCTTTCCTGGTTTCCCCTCTGAAAACCCCCTATCCTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATCCCCTTTCCTGGTTTCCCCTCTGAAAACCCCCTATCCTATCC  350

seq1  CTCTGCTCACCAACCTACCCACTCCCACTTCCTGGCCCTGGCATTCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCACCAACCTACCCACTCCCACTTCCTGGCCCTGGCATTCCCTG  400

seq1  TCCTGGGGCATAGAGCAGAGAAGAAATATTTCTTAGGTGGACGATTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGCATAGAGCAGAGAAGAAATATTTCTTAGGTGGACGATTCTGG  450

seq1  GGAGAGGTTGTTTGTCAAACATTCTACTTGGACATGTTTCTTAGTCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGTTGTTTGTCAAACATTCTACTTGGACATGTTTCTTAGTCAAAA  500

seq1  TTCATGCCAGCTAGAAAGGAAGCAAAGTTAATGGCATAGCATGGGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCCAGCTAGAAAGGAAGCAAAGTTAATGGCATAGCATGGGTGTGT  550

seq1  TCAACAAAAGTCCCCAGAAGACAGGTATAGGAAAATGAAATGTTCCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAAAGTCCCCAGAAGACAGGTATAGGAAAATGAAATGTTCCTACA  600

seq1  ACAAAGGAGGTGGCCAAGAAACAGTGAGGGGCAAAGAAGGAAAATATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGAGGTGGCCAAGAAACAGTGAGGGGCAAAGAAGGAAAATATAAA  650

seq1  CAAGGTCTCCACAAAGACAACTGAATGTGGCATCAATACAAATTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTCCACAAAGACAACTGAATGTGGCATCAATACAAATTAGAACT  700

seq1  CCACAATTTACTCAAGAGCAGGTATGCAAACATGTGAGACCTCAATCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTTACTCAAGAGCAGGTATGCAAACATGTGAGACCTCAATCAGA  750

seq1  ATTGCCCCATATCTAACTCAATGGAAATTTTCAAAGAAAGAATCTTGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCCATATCTAACTCAATGGAAATTTTCAAAGAAAGAATCTTGGGG  800

seq1  CCTAACATAACGCTGAAGAGAGCAGGAGGCTTCCTGCCATCAGACAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATAACGCTGAAGAGAGCAGGAGGCTTCCTGCCATCAGACAGACT  850

seq1  GAGGCCTTTCTG-AAAAAAAAAAGTTAAGAGCAAGGGAATTCTTGATATC  899
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTTTCTGAAAAAAAAAAAGTTAAGAGCAAGGGAATTCTTGATATC  900

seq1  AATTCTCATAGCAGCTTGCAAGGTTTACTGAAAGGGGCTGCAGGTTAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCATAGCAGCTTGCAAGGTTTACTGAAAGGGGCTGCAGGTTAGTT  950

seq1  CTAGGAGGCCAAGAACTGTAGATTAGGTGCAGAAGACCAACTGTGATGAC  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTAGGAGGCCAAGAACTGTAGATTA-GTGCAGAAGACCAACTGTGATGAC  999

seq1  AGACCAGAAGGAAGGTCAATGAAGCTTGGCTAATTTTGTCAATGAAATAC  1049
      ||||||||||  | ||||||||||||||||| |||||||| |||||||||
seq2  AGACCAGAAG--AAGTCAATGAAGCTTGGCT-ATTTTGTC-ATGAAATAC  1045

seq1  TCCTTGCTAGTTACAATAAACATTTATAAAAATTTATACAAGTGT-GTCT  1098
      ||| |||||| |||||||||||||||  ||||||||||||||||| || |
seq2  TCC-TGCTAG-TACAATAAACATTTAATAAAATTTATACAAGTGTGGTTT  1093

seq1  GCAAGCAAGGTTAACTTACCTATTGAGTTGAGGATTTTCATTGTTAACTG  1148
      || ||||| | |||||   ||| |||| ||||   || ||||||||||||
seq2  GC-AGCAA-GCTAACT--ACTA-TGAG-TGAG--ATTCCATTGTTAACTG  1135

seq1  AATTTTTATTCTAAAATCTG-ACTTCATTATTAGAATAAATC-TCCCCAA  1196
      || ||||||||   |||||| |||||||||||||||||| || |||||||
seq2  AA-TTTTATTC--GAATCTGAACTTCATTATTAGAATAATTCGTCCCCAA  1182

seq1  -TTTAT  1201
       |||||
seq2  GTTTAT  1188


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