BAC Information

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BAC

Clone NameB6Ng01-324O09
Chromosome10 (Build37)
Map Location 90,735,795 - 90,898,169
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324O09.bB6Ng01-324O09.g
ACCGA113094GA113095
length7951,069
definitionB6Ng01-324O09.b B6Ng01-324O09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,735,795 - 90,736,586)(90,897,093 - 90,898,169)
sequence
gaattcttctttgtgtctctctgtttcctcctcctcttcctcctgctcct
cctcctcctcttcctctccacctcctcctcttcctcctcctccttctttt
tggtacagtgctgaaaactgaactcagtacctcatgccaggcaaggtctc
tttcactgagtcgcatcctcagtcaaggtctgagtctctatcatgggaac
aagaactatgttctaggaatgcctcttaacccacaagagacatcccctct
catatctcaatggccagagctgggtcttataactacgcttaagaaatcct
ggtatcggccgggcggtggtggctcatacctttgatcccagcactcggga
ggcagaggcaggcggatttctgagttcgaggccagcctggtctcaaagtg
agttccaggacagccagggctacacagagaaaccctgtcttgaaaaacca
accaaccaaccaaccaaccaaccaaccaaccaaataaacacccccccccc
cccaataaaaacccaccaccgccaccaccactgccaaacaaaccaaacaa
acaatcaaacaatccaaataaaagatatcctggtttcagaacgactgaca
taatgaatagctttctccagcctctcacggggtacctgtgaagttggctc
aggttaggtggcggggtattttcctgactggctacttgtgagggatggtt
tttcctgtaattgactgtgtttgaaatttttgagtaccaggaaacagaaa
cttaggcccattctcccaaactataaggttgcggccccgtcatgt
gaattcctaactaaaaggattctcagggaactttgacggcccgttctttg
acactaacattgaaccctggtgaagaaggaaaaaaaaaaaaaaaaaaaac
tgagttgttcaaggtcactgagacagttgccagcagggttaagagtaaaa
cagggttcttccagctttcccatgacacctccttaaaataaaagattaaa
gtccctgaggaataagacaagaagaaagatatttcttcgctttgaaggca
ccaaaggtccacataggtcaaaatgctcctaacagctagagcgttcgcct
ctaataagatagactgccagtatttgctctaaaatggccccttcttgcac
cagccaattaattttttttaatgatttatggagattctcgaagaaaatgt
tcttcctgcaagaagaattaatatgctgaacttaaaatatttgcactaat
tactaaaggtcaaagtgggattgtgcagagatatttatcagggagggccc
aagggaatggcaggcagacattggacaaattgtctgaaatgctaatcaaa
atgttgaaggagattcactctgtttcttatgcagttacaaactaatgcaa
ggacatacaaaagcctttaaaactaagccatttgccacccataagtggca
gacaaataccataacattaaaaccttcaatggctgcggaggcccttccag
gaacctccagagcttctaacatgctacctgaggtccctactgagcctgtc
tggtacactccttcccttcaccatcctatttattctatccctctgttaga
tctcagtgggtgaccatgctctgtggtgggaagctacggctcgcatctct
gcccttcctcctgtccttgtgtctacaaactcctgagacaaggtagtttc
tcccactgatggatgatggattcattcccctacctttacactggagtcca
ttcatgtgattcgcttcaacccacagactctctcttctttactaaagagt
aactgataccctgatttgtgtgactaagcagatatttctagctgactcat
gctgccaatgtccctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90735795_90736586
seq2: B6Ng01-324O09.b_53_846

seq1  GAATTCTTCTTTGTGTCTCTCTGTTTCCTCCTCCTCTTCCTCCTGCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTGTGTCTCTCTGTTTCCTCCTCCTCTTCCTCCTGCTCCT  50

seq1  CCTCCTCCTCTTCCTCTCCACCTCCTCCTCTTCCTCCTCCTCCTTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCTTCCTCTCCACCTCCTCCTCTTCCTCCTCCTCCTTCTTTT  100

seq1  TGGTACAGTGCTGAAAACTGAACTCAGTACCTCATGCCAGGCAAGGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAGTGCTGAAAACTGAACTCAGTACCTCATGCCAGGCAAGGTCTC  150

seq1  TTTCACTGAGTCGCATCCTCAGTCAAGGTCTGAGTCTCTATCATGGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGAGTCGCATCCTCAGTCAAGGTCTGAGTCTCTATCATGGGAAC  200

seq1  AAGAACTATGTTCTAGGAATGCCTCTTAACCCACAAGAGACATCCCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTATGTTCTAGGAATGCCTCTTAACCCACAAGAGACATCCCCTCT  250

seq1  CATATCTCAATGGCCAGAGCTGGGTCTTATAACTACGCTTAAGAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCAATGGCCAGAGCTGGGTCTTATAACTACGCTTAAGAAATCCT  300

seq1  GGTATCGGCCGGGCGGTGGTGGCTCATACCTTTGATCCCAGCACTCGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCGGCCGGGCGGTGGTGGCTCATACCTTTGATCCCAGCACTCGGGA  350

seq1  GGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTCAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTCAAAGTG  400

seq1  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACCA  450

seq1  ACCAACCAACCAACCAACCAACCAACCAACCAAATAAACACCCCCCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAACCAACCAACCAACCAACCAAATAAACACCCCCCCCCC  500

seq1  CCCAAAAAAAACCCACCACCACCACCACCACCACCAAACAAACCAAACAA  550
      ||||| |||||||||||||| ||||||||||  |||||||||||||||||
seq2  CCCAATAAAAACCCACCACCGCCACCACCACTGCCAAACAAACCAAACAA  550

seq1  ACAAACAAACAAACAAAAAAAAAGAAATCCTGGTATCAGAACGACTGACA  600
      |||| ||||||| | ||| |||||| |||||||| |||||||||||||||
seq2  ACAATCAAACAATCCAAATAAAAGATATCCTGGTTTCAGAACGACTGACA  600

seq1  TAATGAAAAGC-TTCTCCAGCCCCTCACGGGGTACCTGTGAAGTTGGCTC  649
      ||||||| ||| |||||||||| |||||||||||||||||||||||||||
seq2  TAATGAATAGCTTTCTCCAGCCTCTCACGGGGTACCTGTGAAGTTGGCTC  650

seq1  AGGTTAGGTGGTGGGGCAGTTTCCTGACTGGCTGCTTGTGAGGGATGGTT  699
      ||||||||||| |||| | |||||||||||||| ||||||||||||||||
seq2  AGGTTAGGTGGCGGGGTATTTTCCTGACTGGCTACTTGTGAGGGATGGTT  700

seq1  TTTCCTGGAATTGACTTGTTTTGGACTTTTGAAGTTCCAGGAAACAGAAA  749
      ||||||| ||||||||   |||| | ||||  ||| ||||||||||||||
seq2  TTTCCTGTAATTGACTGTGTTTGAAATTTTTGAGTACCAGGAAACAGAAA  750

seq1  CTTAGGCCCAGTCTCCCAAACTATCAGGTTGCGG-CCCGTCATG  792
      |||||||||| ||||||||||||| ||||||||| |||||||||
seq2  CTTAGGCCCATTCTCCCAAACTATAAGGTTGCGGCCCCGTCATG  794

seq1: chr10_90897093_90898169
seq2: B6Ng01-324O09.g_63_1131 (reverse)

seq1  TCACAGGGACAATGGCAGCATGAGTTTCCAGCCTTAGAAATATCTGCTTA  50
      ||||||||||| |||||||||||||   ||||  ||||||||||||||||
seq2  TCACAGGGACATTGGCAGCATGAGT---CAGC--TAGAAATATCTGCTTA  45

seq1  GTCACACAAATTCAGGGTTATCAGTTACTCTTTAGTAAAGAGGAGAGAGT  100
      |||||||||| |||||| ||||||||||||||||||||||| ||||||||
seq2  GTCACACAAA-TCAGGG-TATCAGTTACTCTTTAGTAAAGAAGAGAGAGT  93

seq1  CCTGTGGGTTGAAGCGAATCACATGAATGGACTCCAGTGTAAAGGTAGGG  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGTGGGTTGAAGCGAATCACATGAATGGACTCCAGTGTAAAGGTAGGG  142

seq1  GAATGAATCCATCATCCATCAGTGGGAGAAACTACCTTGTCTCAGGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATCCATCATCCATCAGTGGGAGAAACTACCTTGTCTCAGGAGTT  192

seq1  TGTAGACACAAGGACAGGAGGAAGGGCAGAGATGCGAGCCGTAGCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACACAAGGACAGGAGGAAGGGCAGAGATGCGAGCCGTAGCTTCCC  242

seq1  ACCACAGAGCATGGTCACCCACTGAGATCTAACAGAGGGATAGAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGCATGGTCACCCACTGAGATCTAACAGAGGGATAGAATAAAT  292

seq1  AGGATGGTGAAGGGAAGGAGTGTACCAGACAGGCTCAGTAGGGACCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGTGAAGGGAAGGAGTGTACCAGACAGGCTCAGTAGGGACCTCAG  342

seq1  GTAGCATGTTAGAAGCTCTGGAGGTTCCTGGAAGGGCCTCCGCAGCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATGTTAGAAGCTCTGGAGGTTCCTGGAAGGGCCTCCGCAGCCATT  392

seq1  GAAGGTTTTAATGTTATGGTATTTGTCTGCCACTTATGGGTGGCAAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTTAATGTTATGGTATTTGTCTGCCACTTATGGGTGGCAAATGG  442

seq1  CTTAGTTTTAAAGGCTTTTGTATGTCCTTGCATTAGTTTGTAACTGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTTAAAGGCTTTTGTATGTCCTTGCATTAGTTTGTAACTGCATA  492

seq1  AGAAACAGAGTGAATCTCCTTCAACATTTTGATTAGCATTTCAGACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGAGTGAATCTCCTTCAACATTTTGATTAGCATTTCAGACAATT  542

seq1  TGTCCAATGTCTGCCTGCCATTCCCTTGGGCCCTCCCTGATAAATATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAATGTCTGCCTGCCATTCCCTTGGGCCCTCCCTGATAAATATCTC  592

seq1  TGCACAATCCCACTTTGACCTTTAGTAATTAGTGCAAATATTTTAAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATCCCACTTTGACCTTTAGTAATTAGTGCAAATATTTTAAGTTC  642

seq1  AGCATATTAATTCTTCTTGCAGGAAGAACATTTTCTTCGAGAATCTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTAATTCTTCTTGCAGGAAGAACATTTTCTTCGAGAATCTCCAT  692

seq1  AAATCATTAAAAAAAATTAATTGGCTGGTGCAAGAAGGGGCCATTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTAAAAAAAATTAATTGGCTGGTGCAAGAAGGGGCCATTTTAGA  742

seq1  GCAAATACTGGCAGTCTATCTTATTAGAGGCGAACGCTCTAGCTGTTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACTGGCAGTCTATCTTATTAGAGGCGAACGCTCTAGCTGTTAGG  792

seq1  AGCATTTTGACCTATGTGGACCTTTGGTGCCTTCAAAGCGAAGAAATATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTGACCTATGTGGACCTTTGGTGCCTTCAAAGCGAAGAAATATC  842

seq1  TTTCTTCTTGTCTTATTCCTCAGGGACTTTAATCTTTTATTTTAAGGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTGTCTTATTCCTCAGGGACTTTAATCTTTTATTTTAAGGAGG  892

seq1  TGTCATGGGAAAGCTGGAAGAACCCTGTTTTACTCTTAACCCTGCTGGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGGAAAGCTGGAAGAACCCTGTTTTACTCTTAACCCTGCTGGCA  942

seq1  ACTGTCTCAGTGACCTTGAACAACTCAGTTTTTTTTTTTTTTTTTTTTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTCAGTGACCTTGAACAACTCAGTTTTTTTTTTTTTTTTTTTTCC  992

seq1  TTCTTCACCAGGGTTCAATGTTAGTGTCAAAGAACGGGCCGTCAAAGTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACCAGGGTTCAATGTTAGTGTCAAAGAACGGGCCGTCAAAGTTC  1042

seq1  CCTGAGAATCCTTTTAGTTAGGAATTC  1077
      |||||||||||||||||||||||||||
seq2  CCTGAGAATCCTTTTAGTTAGGAATTC  1069