BAC Information

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BAC

Clone NameB6Ng01-324P24
Chromosome10 (Build37)
Map Location 18,283,418 - 18,409,107
singlet/doubletdoublet
Overlap geneEG627729, D10Bwg1379e
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646, Nhsl1, Hebp2
Downstream geneEG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3, Ifngr1, Il22ra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324P24.bB6Ng01-324P24.g
ACCGA113170GA113171
length1,12786
definitionB6Ng01-324P24.b B6Ng01-324P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,283,418 - 18,284,540)(18,409,022 - 18,409,107)
sequence
gaattctgtattctctgctgcatgataatggggttctcttcatatatact
tgcatatatatgtatatatatgaatatacatgaatatatgtatatgtata
ttctgagattgagtaggtgccattcaccctagagctgtttctcagtcagt
tggaaaggagagttctgtacacattttaacaccaacgctatttaaatgac
tcatattgggagaattatttatggccataattgcctaaaatgttgttttg
tgacccaggagtcttgtgaacatggtgagaggtttgttcaacagagaacc
cagtgagtgaccctacataaatgcttgctagttgagatcctgcgctaaag
cagagctgtctgactaactaacatacccagtgcttttctttagctttctt
gttggtgcttgagttgggtggagtctgcattgtccaggagagggtaaagg
ttccttcatcttggatgtccaaggcaattcacagtttatggaacctggtg
ttcatcgtactgtcaaaggcatacagcattccagaattcttgattaagaa
aaaagagaaagacacatcttacagtttcaatagtgtctaaaccacaaatg
aagcaaaatggctgtggcctgggggtctgcatatggtgcttaggcaaaag
tggaactttcctgggatctcttcctgtcctgtacttagcataaaaaagag
acatccaaattccatagagccccaatcagctctctagatgtttatttgct
ctccaaagctcaccattcctcgtttcctgaaccatgccacatgctggctt
tctggcttccctgtgaggttgagaatacagtgttcttcctcccagtgtct
gctttggtttcctttctgagagtacggtgtgactccatcactcctcccgt
gctttatggtctccaaatcttctcattcgtttctgattgctccatccatc
ctgataaaatctaaccagtgtgacagtctaaacacgagctgaaaatatgg
caatagacggggccaaagtgtaggggaaatcaccagtcctacctcagccc
tacacaagatctgtaggaaacctcaggaccttgaagaagtgggagaatag
gtcttttcaaggggagaacaattattc
tgagttcctaggagagtggaaaaacacttcaataattccaatctcttatt
caataaatactgtgggggtgagggtgagggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18283418_18284540
seq2: B6Ng01-324P24.b_49_1175

seq1  GAATTCTGTATTCTCTGCTGCATGATAATGGGGTTCTCTTCATATATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATTCTCTGCTGCATGATAATGGGGTTCTCTTCATATATACT  50

seq1  TGCATATATATGTATATATATGAATATACATGAATATATGTATATGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATATATGTATATATATGAATATACATGAATATATGTATATGTATA  100

seq1  TTCTGAGATTGAGTAGGTGCCATTCACCCTAGAGCTGTTTCTCAGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGATTGAGTAGGTGCCATTCACCCTAGAGCTGTTTCTCAGTCAGT  150

seq1  TGGAAAGGAGAGTTCTGTACACATTTTAACACCAACGCTATTTAAATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGGAGAGTTCTGTACACATTTTAACACCAACGCTATTTAAATGAC  200

seq1  TCATATTGGGAGAATTATTTATGGCCATAATTGCCTAAAATGTTGTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGGGAGAATTATTTATGGCCATAATTGCCTAAAATGTTGTTTTG  250

seq1  TGACCCAGGAGTCTTGTGAACATGGTGAGAGGTTTGTTCAACAGAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGGAGTCTTGTGAACATGGTGAGAGGTTTGTTCAACAGAGAACC  300

seq1  CAGTGAGTGACCCTACATAAATGCTTGCTAGTTGAGATCCTGCGCTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTGACCCTACATAAATGCTTGCTAGTTGAGATCCTGCGCTAAAG  350

seq1  CAGAGCTGTCTGACTAACTAACATACCCAGTGCTTTTCTTTAGCTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGTCTGACTAACTAACATACCCAGTGCTTTTCTTTAGCTTTCTT  400

seq1  GTTGGTGCTTGAGTTGGGTGGAGTCTGCATTGTCCAGGAGAGGGTAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGCTTGAGTTGGGTGGAGTCTGCATTGTCCAGGAGAGGGTAAAGG  450

seq1  TTCCTTCATCTTGGATGTCCAAGGCAATTCACAGTTTATGGAACCTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCATCTTGGATGTCCAAGGCAATTCACAGTTTATGGAACCTGGTG  500

seq1  TTCATCGTACTGTCAAAGGCATACAGCATTCCAGAATTCTTGATTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCGTACTGTCAAAGGCATACAGCATTCCAGAATTCTTGATTAAGAA  550

seq1  AAAAGAGAAAGACACATCTTACAGTTTCAATAGTGTCTAAACCACAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAAGACACATCTTACAGTTTCAATAGTGTCTAAACCACAAATG  600

seq1  AAGCAAAATGGCTGTGGCCTGGGGGTCTGCATATGGTGCTTAGGCAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATGGCTGTGGCCTGGGGGTCTGCATATGGTGCTTAGGCAAAAG  650

seq1  TGGAACTTTCCTGGGATCTCTTCCTGTCCTGTACTTAGCATAAAAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTTCCTGGGATCTCTTCCTGTCCTGTACTTAGCATAAAAAAGAG  700

seq1  ACATCCAAATTCCATAGAGCCCCAATCAGCTCTCTAGATGTTTATTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAATTCCATAGAGCCCCAATCAGCTCTCTAGATGTTTATTTGCT  750

seq1  CTCCAAAGCTCACCATTCCTCGTTTCCTGAACCATGCCACATGCTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAGCTCACCATTCCTCGTTTCCTGAACCATGCCACATGCTGGCTT  800

seq1  TCTGGCTTCCCTGTGAGGTTGAGAATACAGTGTTCTTCCTCCCAGTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTCCCTGTGAGGTTGAGAATACAGTGTTCTTCCTCCCAGTGTCT  850

seq1  GCTTTGGTTTCCTTTCTGAGAGTACGGTGTGACTCCATCACTCCTCCCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTTTCCTTTCTGAGAGTACGGTGTGACTCCATCACTCCTCCCGT  900

seq1  GCTTTATGGTCTCCAAATCTTCTCATTCGTTTCTGATTGCTCCATCCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGGTCTCCAAATCTTCTCATTCGTTTCTGATTGCTCCATCCATC  950

seq1  CTGATAAAATCTAACCAGTGTGACAGTCTAAACACGAGCTGAAAAATATG  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGATAAAATCTAACCAGTGTGACAGTCTAAACACGAGCTG-AAAATATG  999

seq1  GCAATAGAC-GGGCCAAAGTGTAGGGGAAATCACCAG-CCTACCTCAGCC  1048
      ||||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  GCAATAGACGGGGCCAAAGTGTAGGGGAAATCACCAGTCCTACCTCAGCC  1049

seq1  CTACACAAGATCTGTAAGAAA-CTCAGGAACCCTGA--GAGTGGGAGAAA  1095
      |||||||||||||||| |||| |||||| ||| |||   |||||||||| 
seq2  CTACACAAGATCTGTAGGAAACCTCAGG-ACCTTGAAGAAGTGGGAGAAT  1098

seq1  TAGTCTTTCCAAGGGGAG-ACAATAATTC  1123
        |||||| ||||||||| ||||| ||||
seq2  AGGTCTTTTCAAGGGGAGAACAATTATTC  1127

seq1: chr10_18409022_18409107
seq2: B6Ng01-324P24.g_73_158 (reverse)

seq1  CCCCCACCCTCACCCTCACCCCCACAGTATTTATTGAATAAGAGATTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCTCACCCTCACCCCCACAGTATTTATTGAATAAGAGATTGGA  50

seq1  ATTATTGAAGTGTTTTTCCACTCTCCTAGGAACTCA  86
      ||||||||||||||||||||||||||||||||||||
seq2  ATTATTGAAGTGTTTTTCCACTCTCCTAGGAACTCA  86