BAC Information

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BAC

Clone NameB6Ng01-325A17
Chromosome10 (Build37)
Map Location 104,200,942 - 104,202,122
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573, BC067068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325A17.bB6Ng01-325A17.g
ACCGA113204GA113205
length1,2591,181
definitionB6Ng01-325A17.b B6Ng01-325A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaaccagtagttgagcttgatgttcagtgagagaaattgtctt
aaaaatatgatttttaaccaatgcagttatgtatttatatattttggtaa
aggaatcttaccatgttgtcttggatagctttgatttgcctatgtagacc
aggttggctttgaactcacaaagatgcacttgcgtctgcctcccaaattc
tgggatcaagagcacaagtcagcacaattaagtaagtgtctatttcttcc
aagaacttttatgcttcctgtgatagattttaagacacatggatgtatac
catcgtcactatatacttagtctttccattgaataaagtcatatcttaat
tgccatttgcttcatgtttctagcaccactgactattgatatttgtttgc
tatctacatattttattctttgtcttctctattcatttcctggattcctt
tttattaaatggatatatctgtatgcttttcaagctgccttgtttctttt
actattttcttcttttactttgttctttttttcttaatgatccacagaac
acacttaatatttgtgtttaaaatggcttaacatggattaatataaaaat
aacttttattagcctgaaattttcgtctctaaggcatactgtcttcaact
gttaacttgggcctactcgtggaatcatctatccactgtacaatcttatc
tagggttagtatattttcagcctctgagacttactgtgaataagatcatc
tgttacagttcttcctgaactctaggtcggtggttccactcagttgttct
ggctcacctcctctccaagctaaccgactcaatctggcttcttttggctt
cttcttggtctcatactgactgtggcaatatgtcttaatcttctggatcc
ttctcatttggtggctcattctcgctatacctgtgtccagcttgttctct
cttcaacctgtgtaagtaaaactctcaggtaaaactgcctcgtttctcct
tctctctagtggcccctctttttctcactgttcatctgagagttgggcat
atcctattgtggtcatatttttcttccaattcatcacttgtctgcaacca
attggagatcacttagatctctcgcacccattagagaaacatgatgcctt
ccttctcaccaacttattaatctcaatgcaatggactagaggtgtgtcta
gacagaccactgtaactgaaacagttttctcagaaaaaacctctactcta
aggaaccag

gaattccatgagggtgtagttacttgcctgattcattgtctgaagcaact
gctatgttccatgaattctcatcatcaataccagtaattaatgaacattt
tactcgtatgtgtccactgctattatttctaactttcatgacaaatttta
aggtttattctttaccagtatagataaggagcctttggaaagcttaatgg
tttttctgagttacatatgtaagagagttacaagggaagaagtaacaggt
tcccttttatttctcctctatcacagaagagctctgggagaagccttgct
tcagtccatagcatcccttctcctctgaatatattcttccctcttaggaa
acacttcctgttttctagacagatccaaagcatattcacaagaccaagtc
caaaaaaagaaggaatttaccatgtcccacacctggcttgggagctattg
tttgctgataacatctcaagaagagagattcaattttgctctccctatcc
ctctcccaccctccttctctcctacccccctccctccctctcaccccttc
ctctctggatatagctttaatgtatggtttaatttggatatctctctgca
ctccccagtgacgtttaaaggcttggccacaacatcatgctattgggaag
tgaaggagtatttaagacgtacaaactcttgggggaatccttgagcttcc
ttctgttttgaatctctggcttgtgataggaatagatgtagcttccatac
aacttccctctcattgctaatcatcaaatgtcttgccttaaaatatatat
ttacaaataacctttgatcacgacttgctaccattgaaataattcatata
taaaggcaaacgcttatagatttagcatcccccgcccaggaagaatctgt
ttttctccagagctgcagtcctggaaactatccatgtttcagaagatggc
cctacaactgtgcacatactggaagccttatgtggcatagtgggataaag
gaaacaaaagactaatatgctcaggcccttagatcctgcattgatatcca
gcagccacaacaacacaacagccaacacaaagaaacaaaagtactaccaa
aaccaaaaatatattctgttggccaacatgaaaagcataacacctgcata
tacctggtatattgcatatgggatggagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104200942_104202122
seq2: B6Ng01-325A17.g_66_1246

seq1  GAATTCCATGAGGGTGTAGTTACTTGCCTGATTCATTGTCTGAAGCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGGGTGTAGTTACTTGCCTGATTCATTGTCTGAAGCAACT  50

seq1  GCTATGTTCCATGAATTCTCATCATCAATACCAGTAATTAATGAACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTTCCATGAATTCTCATCATCAATACCAGTAATTAATGAACATTT  100

seq1  TACTCGTATGTGTCCACTGCTATTATTTCTAACTTTCATGACAAATTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCGTATGTGTCCACTGCTATTATTTCTAACTTTCATGACAAATTTTA  150

seq1  AGGTTTATTCTTTACCAGTATAGATAAGGAGCCTTTGGAAAGCTTAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTCTTTACCAGTATAGATAAGGAGCCTTTGGAAAGCTTAATGG  200

seq1  TTTTTCTGAGTTACATATGTAAGAGAGTTACAAGGGAAGAAGTAACAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGAGTTACATATGTAAGAGAGTTACAAGGGAAGAAGTAACAGGT  250

seq1  TCCCTTTTATTTCTCCTCTATCACAGAAGAGCTCTGGGAGAAGCCTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTATTTCTCCTCTATCACAGAAGAGCTCTGGGAGAAGCCTTGCT  300

seq1  TCAGTCCATAGCATCCCTTCTCCTCTGAATATATTCTTCCCTCTTAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCATAGCATCCCTTCTCCTCTGAATATATTCTTCCCTCTTAGGAA  350

seq1  ACACTTCCTGTTTTCTAGACAGATCCAAAGCATATTCACAAGACCAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCTGTTTTCTAGACAGATCCAAAGCATATTCACAAGACCAAGTC  400

seq1  CAAAAAAAGAAGGAATTTACCATGTCCCACACCTGGCTTGGGAGCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAGAAGGAATTTACCATGTCCCACACCTGGCTTGGGAGCTATTG  450

seq1  TTTGCTGATAACATCTCAAGAAGAGAGATTCAATTTTGCTCTCCCTATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGATAACATCTCAAGAAGAGAGATTCAATTTTGCTCTCCCTATCC  500

seq1  CTCTCCCACCCTCCTTCTCTCCTACCCCCCTCCCTCCCTCTCACCCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCACCCTCCTTCTCTCCTACCCCCCTCCCTCCCTCTCACCCCTTC  550

seq1  CTCTCTGGATATAGCTTTAATGTATGGTTTAATTTGGATATCTCTCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGATATAGCTTTAATGTATGGTTTAATTTGGATATCTCTCTGCA  600

seq1  CTCCCCAGTGACGTTTAAAGGCTTGGCCACAACATCATGCTATTGGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGTGACGTTTAAAGGCTTGGCCACAACATCATGCTATTGGGAAG  650

seq1  TGAAGGAGTATTTAAGACGTACAAACTCTTGGGGGAATCCTTGAGCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGTATTTAAGACGTACAAACTCTTGGGGGAATCCTTGAGCTTCC  700

seq1  TTCTGTTTTGAATCTCTGGCTTGTGATAGGAATAGATGTAGCTTCCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGAATCTCTGGCTTGTGATAGGAATAGATGTAGCTTCCATAC  750

seq1  AACTTCCCTCTCATTGCTAATCATCAAATGTCTTGCCTTAAAATATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCTCTCATTGCTAATCATCAAATGTCTTGCCTTAAAATATATAT  800

seq1  TTACAAATAACCTTTGATCACGACTTGCTACCATTGAAATAATTCATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATAACCTTTGATCACGACTTGCTACCATTGAAATAATTCATATA  850

seq1  TAAAGGCAAACGCTTATAGATTTAGCATCCCCCGCCCAGGAAGAATCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAAACGCTTATAGATTTAGCATCCCCCGCCCAGGAAGAATCTGT  900

seq1  TTTTCTCCAGAGCTGCAGGTCCTGGAAACTATCCATGTTTCAGAAGATGG  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTCTCCAGAGCTGCA-GTCCTGGAAACTATCCATGTTTCAGAAGATGG  949

seq1  CCCTACAACTGTGCACATACTGGAAGCCTTATGTGGCATAGTGGGATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAACTGTGCACATACTGGAAGCCTTATGTGGCATAGTGGGATAAA  999

seq1  GGAAACAAAAAGACTAATATGCTCAAGCCCTTAGATCCTGCATTTGATAT  1050
      |||||| |||||||||||||||||| |||||||||||||||| |||||||
seq2  GGAAAC-AAAAGACTAATATGCTCAGGCCCTTAGATCCTGCA-TTGATAT  1047

seq1  CCAGCAGCAACAACAACAACAACAGCAACAACA-AAAGAAACAAAAAGAA  1099
      |||||||| |||||||| ||||||||  ||||| |||||||| ||||| |
seq2  CCAGCAGCCACAACAAC-ACAACAGC--CAACACAAAGAAAC-AAAAGTA  1093

seq1  CAACAAAAACCAAAAATATA-TCTGT--GGCAACATG-AAAGCAT-ACA-  1143
      | || ||||||||||||||| |||||  | ||||||| ||||||| ||| 
seq2  CTACCAAAACCAAAAATATATTCTGTTGGCCAACATGAAAAGCATAACAC  1143

seq1  CTGCATATTAACTTGTATTATGCATATGGTAT-GAGTCC  1181
      ||||||| || || ||||  ||||||||| || ||||||
seq2  CTGCATA-TACCTGGTATATTGCATATGGGATGGAGTCC  1181


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